RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 OR2T11Q8NH01 316 aa12.37□□□□□ -0.43
HMGN1-220ENST00000492280 SEPT8Q92599 483 aa12.37□□□□□ -0.43
HMGN1-220ENST00000492280 UNC93B1Q9H1C4 597 aa12.37□□□□□ -0.43
HMGN1-220ENST00000492280 SPAG4Q9NPE6 437 aa12.37□□□□□ -0.43
HMGN1-220ENST00000492280 ZDHHC7Q9NXF8 308 aa12.37□□□□□ -0.43
HMGN1-220ENST00000492280 MAP10Q9P2G4 905 aa12.37□□□□□ -0.43
HMGN1-220ENST00000492280 AURKCQ9UQB9 309 aa12.37□□□□□ -0.43
HMGN1-220ENST00000492280 YIPF1Q9Y548 306 aa12.37□□□□□ -0.43
HMGN1-220ENST00000492280 ANKRD66B4E2M5 251 aa12.36□□□□□ -0.43
HMGN1-220ENST00000492280 STX7O15400 261 aaKnown RBP12.36□□□□□ -0.43
HMGN1-220ENST00000492280 KATNA1O75449 491 aa12.36□□□□□ -0.43
HMGN1-220ENST00000492280 GUCA1CO95843 209 aa12.36□□□□□ -0.43
HMGN1-220ENST00000492280 TSPAN12O95859 305 aa12.36□□□□□ -0.43
HMGN1-220ENST00000492280 F11P03951 625 aa12.36□□□□□ -0.43
HMGN1-220ENST00000492280 MTHFD1P11586 935 aaKnown RBP12.36□□□□□ -0.43
HMGN1-220ENST00000492280 DNAJB1P25685 340 aa12.36□□□□□ -0.43
HMGN1-220ENST00000492280 HTR6P50406 440 aa12.36□□□□□ -0.43
HMGN1-220ENST00000492280 RABL3Q5HYI8 236 aa12.36□□□□□ -0.43
HMGN1-220ENST00000492280 AFTPHQ6ULP2 937 aa12.36□□□□□ -0.43
HMGN1-220ENST00000492280 UGT2A3Q6UWM9 527 aa12.36□□□□□ -0.43
HMGN1-220ENST00000492280 ARL14EPQ8N8R7 260 aaPredicted RBP12.36□□□□□ -0.43
HMGN1-220ENST00000492280 TMEM102Q8N9M5 508 aaPredicted RBP12.36□□□□□ -0.43
HMGN1-220ENST00000492280 SLC43A3Q8NBI5 491 aa12.36□□□□□ -0.43
HMGN1-220ENST00000492280 DNAJB14Q8TBM8 379 aa12.36□□□□□ -0.43
HMGN1-220ENST00000492280 LKAAEAR1Q8TD35 194 aa12.36□□□□□ -0.43
HMGN1-220ENST00000492280 EME1Q96AY2 570 aa12.36□□□□□ -0.43
HMGN1-220ENST00000492280 PPWD1Q96BP3 646 aaKnown RBP12.36□□□□□ -0.43
HMGN1-220ENST00000492280 ASB9Q96DX5 294 aa12.36□□□□□ -0.43
HMGN1-220ENST00000492280 SMG9Q9H0W8 520 aaKnown RBP12.36□□□□□ -0.43
HMGN1-220ENST00000492280 TNKS2Q9H2K2 1166 aa12.36□□□□□ -0.43
HMGN1-220ENST00000492280 CROTQ9UKG9 612 aa12.36□□□□□ -0.43
HMGN1-220ENST00000492280 COMMD10Q9Y6G5 202 aa12.36□□□□□ -0.43
HMGN1-220ENST00000492280 A0A1B0GVM2 712 aa12.36□□□□□ -0.43
HMGN1-220ENST00000492280 KRT87PA6NCN2 255 aa12.36□□□□□ -0.43
HMGN1-220ENST00000492280 C2orf81A6NN90 581 aa12.36□□□□□ -0.43
HMGN1-220ENST00000492280 E5RI56 91 aa12.36□□□□□ -0.43
HMGN1-220ENST00000492280 TRIM24O15164 1050 aa12.36□□□□□ -0.43
HMGN1-220ENST00000492280 OR4F21O95013 312 aa12.36□□□□□ -0.43
HMGN1-220ENST00000492280 NCK1P16333 377 aa12.36□□□□□ -0.43
HMGN1-220ENST00000492280 OGNP20774 298 aaKnown RBP12.36□□□□□ -0.43
HMGN1-220ENST00000492280 CSKP41240 450 aa12.36□□□□□ -0.43
HMGN1-220ENST00000492280 RHOAP61586 193 aa12.36□□□□□ -0.43
HMGN1-220ENST00000492280 CYP4F8P98187 520 aa12.36□□□□□ -0.43
HMGN1-220ENST00000492280 STX5Q13190 355 aa12.36□□□□□ -0.43
HMGN1-220ENST00000492280 TPGS1Q6ZTW0 290 aa12.36□□□□□ -0.43
HMGN1-220ENST00000492280 RAB44Q7Z6P3 723 aaPredicted RBP12.36□□□□□ -0.43
HMGN1-220ENST00000492280 HERC6Q8IVU3 1022 aa12.36□□□□□ -0.43
HMGN1-220ENST00000492280 APCDD1Q8J025 514 aa12.36□□□□□ -0.43
HMGN1-220ENST00000492280 CD200R1Q8TD46 325 aa12.36□□□□□ -0.43
HMGN1-220ENST00000492280 MYLIPQ8WY64 445 aa12.36□□□□□ -0.43
HMGN1-220ENST00000492280 FATE1Q969F0 183 aa12.36□□□□□ -0.43
HMGN1-220ENST00000492280 TMEM74Q96NL1 305 aa12.36□□□□□ -0.43
HMGN1-220ENST00000492280 SLC29A1Q99808 456 aa12.36□□□□□ -0.43
HMGN1-220ENST00000492280 NOL11Q9H8H0 719 aaKnown RBP12.36□□□□□ -0.43
HMGN1-220ENST00000492280 ZNF334Q9HCZ1 680 aaPredicted RBP12.36□□□□□ -0.43
HMGN1-220ENST00000492280 TRPM5Q9NZQ8 1165 aa12.36□□□□□ -0.43
HMGN1-220ENST00000492280 H7C4K7 107 aa12.35□□□□□ -0.43
HMGN1-220ENST00000492280 KERAO60938 352 aa12.35□□□□□ -0.43
HMGN1-220ENST00000492280 CLDN11O75508 207 aa12.35□□□□□ -0.43
HMGN1-220ENST00000492280 RAD51Q06609 339 aa12.35□□□□□ -0.43
HMGN1-220ENST00000492280 RPS6KA2Q15349 733 aa12.35□□□□□ -0.43
HMGN1-220ENST00000492280 USP41Q3LFD5 358 aa12.35□□□□□ -0.43
HMGN1-220ENST00000492280 ADGRF1Q5T601 910 aa12.35□□□□□ -0.43
HMGN1-220ENST00000492280 ARMC12Q5T9G4 340 aa12.35□□□□□ -0.43
HMGN1-220ENST00000492280 KANK2Q63ZY3 851 aa12.35□□□□□ -0.43
HMGN1-220ENST00000492280 MYO1HQ8N1T3 1032 aa12.35□□□□□ -0.43
HMGN1-220ENST00000492280 GPR150Q8NGU9 434 aa12.35□□□□□ -0.43
HMGN1-220ENST00000492280 CANT1Q8WVQ1 401 aa12.35□□□□□ -0.43
HMGN1-220ENST00000492280 FAR2Q96K12 515 aa12.35□□□□□ -0.43
HMGN1-220ENST00000492280 DEFB118Q96PH6 123 aa12.35□□□□□ -0.43
HMGN1-220ENST00000492280 SLC25A23Q9BV35 468 aa12.35□□□□□ -0.43
HMGN1-220ENST00000492280 TTLL2Q9BWV7 592 aa12.35□□□□□ -0.43
HMGN1-220ENST00000492280 VCX3BQ9H321 246 aa12.35□□□□□ -0.43
HMGN1-220ENST00000492280 COQ10BQ9H8M1 238 aa12.35□□□□□ -0.43
HMGN1-220ENST00000492280 CD274Q9NZQ7 290 aa12.35□□□□□ -0.43
HMGN1-220ENST00000492280 C6orf203Q9P0P8 240 aaPredicted RBP12.35□□□□□ -0.43
HMGN1-220ENST00000492280 EVLQ9UI08 416 aaPredicted RBP12.35□□□□□ -0.43
HMGN1-220ENST00000492280 TRMT6Q9UJA5 497 aaKnown RBP12.35□□□□□ -0.43
HMGN1-220ENST00000492280 MICAL3Q7RTP6 2002 aa12.35□□□□□ -0.43
HMGN1-220ENST00000492280 CHD9Q3L8U1 2897 aa12.35□□□□□ -0.43
HMGN1-220ENST00000492280 C7orf72A4D263 438 aa12.35□□□□□ -0.43
HMGN1-220ENST00000492280 SAC3D1A6NKF1 404 aa12.35□□□□□ -0.43
HMGN1-220ENST00000492280 FXYD1O00168 92 aa12.35□□□□□ -0.43
HMGN1-220ENST00000492280 PRRG1O14668 218 aa12.35□□□□□ -0.43
HMGN1-220ENST00000492280 SLC22A2O15244 555 aa12.35□□□□□ -0.43
HMGN1-220ENST00000492280 KIF1CO43896 1103 aaKnown RBP12.35□□□□□ -0.43
HMGN1-220ENST00000492280 CNPP09543 421 aaKnown RBP12.35□□□□□ -0.43
HMGN1-220ENST00000492280 PKMP14618 531 aaKnown RBP12.35□□□□□ -0.43
HMGN1-220ENST00000492280 LPOP22079 712 aaPredicted RBP12.35□□□□□ -0.43
HMGN1-220ENST00000492280 UGT1A1P22309 533 aa12.35□□□□□ -0.43
HMGN1-220ENST00000492280 UGT1A4P22310 534 aa12.35□□□□□ -0.43
HMGN1-220ENST00000492280 UGT1A3P35503 534 aa12.35□□□□□ -0.43
HMGN1-220ENST00000492280 UGT1A5P35504 534 aa12.35□□□□□ -0.43
HMGN1-220ENST00000492280 SUOXP51687 545 aa12.35□□□□□ -0.43
HMGN1-220ENST00000492280 UFM1P61960 85 aa12.35□□□□□ -0.43
HMGN1-220ENST00000492280 NFKB2Q00653 900 aa12.35□□□□□ -0.43
HMGN1-220ENST00000492280 LCP2Q13094 533 aa12.35□□□□□ -0.43
HMGN1-220ENST00000492280 RFTN1Q14699 578 aaPredicted RBP12.35□□□□□ -0.43
HMGN1-220ENST00000492280 TAF1AQ15573 450 aaPredicted RBP12.35□□□□□ -0.43
HMGN1-220ENST00000492280 TIGD2Q4W5G0 525 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms