RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 TRIM48Q8IWZ4 208 aa16.41■□□□□ 0.22
PDLIM2-217ENST00000491330 NAGSQ8N159 534 aa16.41■□□□□ 0.22
PDLIM2-217ENST00000491330 AGBL5Q8NDL9 886 aa16.41■□□□□ 0.22
PDLIM2-217ENST00000491330 OR4D9Q8NGE8 314 aa16.41■□□□□ 0.22
PDLIM2-217ENST00000491330 HTR3CQ8WXA8 447 aa16.41■□□□□ 0.22
PDLIM2-217ENST00000491330 PRR11Q96HE9 360 aaPredicted RBP16.41■□□□□ 0.22
PDLIM2-217ENST00000491330 AGAP2Q99490 1192 aa16.41■□□□□ 0.22
PDLIM2-217ENST00000491330 RDH14Q9HBH5 336 aa16.41■□□□□ 0.22
PDLIM2-217ENST00000491330 PKP3Q9Y446 797 aa16.41■□□□□ 0.22
PDLIM2-217ENST00000491330 ZNF711Q9Y462 761 aa16.41■□□□□ 0.22
PDLIM2-217ENST00000491330 A0A0U1RQS6 177 aa16.4■□□□□ 0.22
PDLIM2-217ENST00000491330 MACROD2A1Z1Q3 448 aa16.4■□□□□ 0.22
PDLIM2-217ENST00000491330 GOLGA6L9A6NEM1 432 aa16.4■□□□□ 0.22
PDLIM2-217ENST00000491330 KMOO15229 486 aa16.4■□□□□ 0.22
PDLIM2-217ENST00000491330 ATXN7O15265 892 aaPredicted RBP16.4■□□□□ 0.22
PDLIM2-217ENST00000491330 B4GAT1O43505 415 aa16.4■□□□□ 0.22
PDLIM2-217ENST00000491330 NUAK1O60285 661 aa16.4■□□□□ 0.22
PDLIM2-217ENST00000491330 FUCA1P04066 466 aa16.4■□□□□ 0.22
PDLIM2-217ENST00000491330 LIPCP11150 499 aa16.4■□□□□ 0.22
PDLIM2-217ENST00000491330 ACP5P13686 325 aa16.4■□□□□ 0.22
PDLIM2-217ENST00000491330 PTPN3P26045 913 aa16.4■□□□□ 0.22
PDLIM2-217ENST00000491330 FASLGP48023 281 aa16.4■□□□□ 0.22
PDLIM2-217ENST00000491330 ATP1A2P50993 1020 aa16.4■□□□□ 0.22
PDLIM2-217ENST00000491330 MPP3Q13368 585 aa16.4■□□□□ 0.22
PDLIM2-217ENST00000491330 SQSTM1Q13501 440 aa16.4■□□□□ 0.22
PDLIM2-217ENST00000491330 PRKD1Q15139 912 aaPredicted RBP16.4■□□□□ 0.22
PDLIM2-217ENST00000491330 PPP2R5EQ16537 467 aa16.4■□□□□ 0.22
PDLIM2-217ENST00000491330 INSCQ1MX18 579 aa16.4■□□□□ 0.22
PDLIM2-217ENST00000491330 RFLNAQ6ZTI6 216 aa16.4■□□□□ 0.22
PDLIM2-217ENST00000491330 NYAP1Q6ZVC0 841 aa16.4■□□□□ 0.22
PDLIM2-217ENST00000491330 TMC3Q7Z5M5 1100 aa16.4■□□□□ 0.22
PDLIM2-217ENST00000491330 KIAA1328Q86T90 577 aa16.4■□□□□ 0.22
PDLIM2-217ENST00000491330 SYCE1Q8N0S2 351 aa16.4■□□□□ 0.22
PDLIM2-217ENST00000491330 SLC39A7Q92504 469 aa16.4■□□□□ 0.22
PDLIM2-217ENST00000491330 GLYATL1Q969I3 302 aa16.4■□□□□ 0.22
PDLIM2-217ENST00000491330 PLEKHG4BQ96PX9 1271 aa16.4■□□□□ 0.22
PDLIM2-217ENST00000491330 ASPSCR1Q9BZE9 553 aa16.4■□□□□ 0.22
PDLIM2-217ENST00000491330 OSGEPL1Q9H4B0 414 aa16.4■□□□□ 0.22
PDLIM2-217ENST00000491330 RSPH14Q9UHP6 348 aa16.4■□□□□ 0.22
PDLIM2-217ENST00000491330 ADAMTS20P59510 1910 aa16.4■□□□□ 0.22
PDLIM2-217ENST00000491330 CHD6Q8TD26 2715 aa16.39■□□□□ 0.22
PDLIM2-217ENST00000491330 TRBV23OR9-2A0A075B6M9 112 aa16.39■□□□□ 0.21
PDLIM2-217ENST00000491330 SOWAHDA6NJG2 315 aa16.39■□□□□ 0.21
PDLIM2-217ENST00000491330 APOC4-APOC2K7ER74 178 aa16.39■□□□□ 0.21
PDLIM2-217ENST00000491330 KCNJ13O60928 360 aa16.39■□□□□ 0.21
PDLIM2-217ENST00000491330 CDK14O94921 469 aa16.39■□□□□ 0.21
PDLIM2-217ENST00000491330 TJP3O95049 919 aa16.39■□□□□ 0.21
PDLIM2-217ENST00000491330 APOC2P02655 101 aa16.39■□□□□ 0.21
PDLIM2-217ENST00000491330 HLA-DPA1P20036 260 aa16.39■□□□□ 0.21
PDLIM2-217ENST00000491330 PDX1P52945 283 aa16.39■□□□□ 0.21
PDLIM2-217ENST00000491330 LIMK2P53671 638 aa16.39■□□□□ 0.21
PDLIM2-217ENST00000491330 GEMP55040 296 aa16.39■□□□□ 0.21
PDLIM2-217ENST00000491330 RWDD2BP57060 319 aa16.39■□□□□ 0.21
PDLIM2-217ENST00000491330 KIF5AQ12840 1032 aa16.39■□□□□ 0.21
PDLIM2-217ENST00000491330 TMEM71Q6P5X7 295 aa16.39■□□□□ 0.21
PDLIM2-217ENST00000491330 LRRTM4Q86VH4 590 aa16.39■□□□□ 0.21
PDLIM2-217ENST00000491330 CDKL3Q8IVW4 592 aaPredicted RBP16.39■□□□□ 0.21
PDLIM2-217ENST00000491330 SFRP1Q8N474 314 aa16.39■□□□□ 0.21
PDLIM2-217ENST00000491330 SPATA22Q8NHS9 363 aa16.39■□□□□ 0.21
PDLIM2-217ENST00000491330 WBP1Q96G27 269 aa16.39■□□□□ 0.21
PDLIM2-217ENST00000491330 FCRL5Q96RD9 977 aa16.39■□□□□ 0.21
PDLIM2-217ENST00000491330 TAAR9Q96RI9 348 aa16.39■□□□□ 0.21
PDLIM2-217ENST00000491330 OR2AG1Q9H205 316 aa16.39■□□□□ 0.21
PDLIM2-217ENST00000491330 SARS2Q9NP81 518 aaKnown RBP16.39■□□□□ 0.21
PDLIM2-217ENST00000491330 UBP1Q9NZI7 540 aa16.39■□□□□ 0.21
PDLIM2-217ENST00000491330 NFKBIL1Q9UBC1 381 aaPredicted RBP16.39■□□□□ 0.21
PDLIM2-217ENST00000491330 ACSL6Q9UKU0 697 aa16.39■□□□□ 0.21
PDLIM2-217ENST00000491330 AAR2Q9Y312 384 aaKnown RBP16.39■□□□□ 0.21
PDLIM2-217ENST00000491330 hCG_1818297A0A087WSY0 165 aa16.38■□□□□ 0.21
PDLIM2-217ENST00000491330 IGHV1OR21-1A0A087WYE8 117 aa16.38■□□□□ 0.21
PDLIM2-217ENST00000491330 C2orf81A6NN90 581 aa16.38■□□□□ 0.21
PDLIM2-217ENST00000491330 NRDCO43847 1150 aa16.38■□□□□ 0.21
PDLIM2-217ENST00000491330 DNAJC6O75061 913 aa16.38■□□□□ 0.21
PDLIM2-217ENST00000491330 MT-CYBP00156 380 aaPredicted RBP16.38■□□□□ 0.21
PDLIM2-217ENST00000491330 PIRTP0C851 137 aa16.38■□□□□ 0.21
PDLIM2-217ENST00000491330 F3P13726 295 aa16.38■□□□□ 0.21
PDLIM2-217ENST00000491330 IDSP22304 550 aa16.38■□□□□ 0.21
PDLIM2-217ENST00000491330 CD1CP29017 333 aa16.38■□□□□ 0.21
PDLIM2-217ENST00000491330 CTNNA1P35221 906 aaKnown RBP16.38■□□□□ 0.21
PDLIM2-217ENST00000491330 HMGCLP35914 325 aa16.38■□□□□ 0.21
PDLIM2-217ENST00000491330 HALP42357 657 aa16.38■□□□□ 0.21
PDLIM2-217ENST00000491330 CLCNKAP51800 687 aa16.38■□□□□ 0.21
PDLIM2-217ENST00000491330 EPHA4P54764 986 aa16.38■□□□□ 0.21
PDLIM2-217ENST00000491330 WNT3AP56704 352 aa16.38■□□□□ 0.21
PDLIM2-217ENST00000491330 ITGA9Q13797 1035 aa16.38■□□□□ 0.21
PDLIM2-217ENST00000491330 MANEAQ5SRI9 462 aa16.38■□□□□ 0.21
PDLIM2-217ENST00000491330 IYDQ6PHW0 289 aa16.38■□□□□ 0.21
PDLIM2-217ENST00000491330 BBS12Q6ZW61 710 aa16.38■□□□□ 0.21
PDLIM2-217ENST00000491330 PLXDC1Q8IUK5 500 aa16.38■□□□□ 0.21
PDLIM2-217ENST00000491330 SLITRK4Q8IW52 837 aa16.38■□□□□ 0.21
PDLIM2-217ENST00000491330 UBL4BQ8N7F7 174 aa16.38■□□□□ 0.21
PDLIM2-217ENST00000491330 USP7Q93009 1102 aa16.38■□□□□ 0.21
PDLIM2-217ENST00000491330 CRELD1Q96HD1 420 aa16.38■□□□□ 0.21
PDLIM2-217ENST00000491330 SMIM14Q96QK8 99 aa16.38■□□□□ 0.21
PDLIM2-217ENST00000491330 TRIB3Q96RU7 358 aa16.38■□□□□ 0.21
PDLIM2-217ENST00000491330 SEMA6CQ9H3T2 930 aa16.38■□□□□ 0.21
PDLIM2-217ENST00000491330 CPNE5Q9HCH3 593 aa16.38■□□□□ 0.21
PDLIM2-217ENST00000491330 KLC4Q9NSK0 619 aa16.38■□□□□ 0.21
PDLIM2-217ENST00000491330 SAE1Q9UBE0 346 aaPredicted RBP16.38■□□□□ 0.21
PDLIM2-217ENST00000491330 KCNK6Q9Y257 313 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms