RNA–Protein interactions for RNA: ENST00000490723.1

PHC3-212, Transcript of polyhomeotic homolog 3, human

TSL 2

Gene PHC3, Length 264 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHC3-212	ENST00000490723	MYLK3	Q32MK0	819 aa		4.03	□□□□□ -1.76
PHC3-212	ENST00000490723	HSP90AB4P	Q58FF6	505 aa		4.03	□□□□□ -1.76
PHC3-212	ENST00000490723	PLA2G4F	Q68DD2	849 aa		4.03	□□□□□ -1.76
PHC3-212	ENST00000490723	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	4.03	□□□□□ -1.76
PHC3-212	ENST00000490723	EPHX4	Q8IUS5	362 aa		4.03	□□□□□ -1.76
PHC3-212	ENST00000490723	FRMD1	Q8N878	549 aa		4.03	□□□□□ -1.76
PHC3-212	ENST00000490723	OR52I2	Q8NH67	350 aa		4.03	□□□□□ -1.76
PHC3-212	ENST00000490723	THAP6	Q8TBB0	222 aa		4.03	□□□□□ -1.76
PHC3-212	ENST00000490723	RFFL	Q8WZ73	363 aa		4.03	□□□□□ -1.76
PHC3-212	ENST00000490723	FBXO17	Q96EF6	278 aa		4.03	□□□□□ -1.76
PHC3-212	ENST00000490723	PPM1M	Q96MI6	270 aa		4.03	□□□□□ -1.76
PHC3-212	ENST00000490723	LRMDA	Q9H2I8	198 aa		4.03	□□□□□ -1.76
PHC3-212	ENST00000490723	PIGM	Q9H3S5	423 aa		4.03	□□□□□ -1.76
PHC3-212	ENST00000490723	MAP3K20	Q9NYL2	800 aa	Known RBP	4.03	□□□□□ -1.76
PHC3-212	ENST00000490723	STK39	Q9UEW8	545 aa		4.03	□□□□□ -1.76
PHC3-212	ENST00000490723	TMEM98	Q9Y2Y6	226 aa		4.03	□□□□□ -1.76
PHC3-212	ENST00000490723	CLIC4	Q9Y696	253 aa		4.03	□□□□□ -1.76
PHC3-212	ENST00000490723		A0A1W2PQF6	199 aa		4.02	□□□□□ -1.77
PHC3-212	ENST00000490723	EIF4E1B	A6NMX2	242 aa	Known RBP	4.02	□□□□□ -1.77
PHC3-212	ENST00000490723	FAM90A26	D6RGX4	464 aa		4.02	□□□□□ -1.77
PHC3-212	ENST00000490723	ATP2A1	O14983	1001 aa		4.02	□□□□□ -1.77
PHC3-212	ENST00000490723	EIF3D	O15371	548 aa	Known RBP eCLIP	4.02	□□□□□ -1.77
PHC3-212	ENST00000490723	CREB3	O43889	395 aa		4.02	□□□□□ -1.77
PHC3-212	ENST00000490723	PRSS1	P07477	247 aa		4.02	□□□□□ -1.77
PHC3-212	ENST00000490723	HSPA1A	P0DMV8	641 aa	Known RBP	4.02	□□□□□ -1.77
PHC3-212	ENST00000490723	HSPA1B	P0DMV9	641 aa	Known RBP	4.02	□□□□□ -1.77
PHC3-212	ENST00000490723	CD53	P19397	219 aa		4.02	□□□□□ -1.77
PHC3-212	ENST00000490723	BSG	P35613	385 aa		4.02	□□□□□ -1.77
PHC3-212	ENST00000490723	PRCP	P42785	496 aa		4.02	□□□□□ -1.77
PHC3-212	ENST00000490723	PDE1C	Q14123	709 aa	Predicted RBP	4.02	□□□□□ -1.77
PHC3-212	ENST00000490723	RBM39	Q14498	530 aa	Known RBP	4.02	□□□□□ -1.77
PHC3-212	ENST00000490723	MED22	Q15528	200 aa		4.02	□□□□□ -1.77
PHC3-212	ENST00000490723	PNLIPRP3	Q17RR3	467 aa		4.02	□□□□□ -1.77
PHC3-212	ENST00000490723	JAKMIP3	Q5VZ66	844 aa		4.02	□□□□□ -1.77
PHC3-212	ENST00000490723	ZNF704	Q6ZNC4	412 aa	Predicted RBP	4.02	□□□□□ -1.77
PHC3-212	ENST00000490723	FOXP4	Q8IVH2	680 aa	Predicted RBP	4.02	□□□□□ -1.77
PHC3-212	ENST00000490723	KLHDC8B	Q8IXV7	354 aa		4.02	□□□□□ -1.77
PHC3-212	ENST00000490723	OR1J2	Q8NGS2	313 aa		4.02	□□□□□ -1.77
PHC3-212	ENST00000490723	UTP15	Q8TED0	518 aa	Known RBP	4.02	□□□□□ -1.77
PHC3-212	ENST00000490723	DNAAF4	Q8WXU2	420 aa		4.02	□□□□□ -1.77
PHC3-212	ENST00000490723	ZKSCAN4	Q969J2	545 aa	Predicted RBP	4.02	□□□□□ -1.77
PHC3-212	ENST00000490723	UPF2	Q9HAU5	1272 aa	Known RBP	4.02	□□□□□ -1.77
PHC3-212	ENST00000490723	RRP7BP	Q9NSQ0	103 aa		4.02	□□□□□ -1.77
PHC3-212	ENST00000490723	ZCWPW2	A0A1B0GU75	182 aa		4.01	□□□□□ -1.77
PHC3-212	ENST00000490723	FAM72C	H0Y354	149 aa		4.01	□□□□□ -1.77
PHC3-212	ENST00000490723	CLEC3B	P05452	202 aa		4.01	□□□□□ -1.77
PHC3-212	ENST00000490723	UGT1A1	P22309	533 aa		4.01	□□□□□ -1.77
PHC3-212	ENST00000490723	NFKBIA	P25963	317 aa		4.01	□□□□□ -1.77
PHC3-212	ENST00000490723	PIK3CA	P42336	1068 aa		4.01	□□□□□ -1.77
PHC3-212	ENST00000490723	HOXA1	P49639	335 aa	Predicted RBP	4.01	□□□□□ -1.77
PHC3-212	ENST00000490723	NAB2	Q15742	525 aa		4.01	□□□□□ -1.77
PHC3-212	ENST00000490723	KRTCAP3	Q53RY4	240 aa		4.01	□□□□□ -1.77
PHC3-212	ENST00000490723	ZNF805	Q5CZA5	627 aa		4.01	□□□□□ -1.77
PHC3-212	ENST00000490723	LRIF1	Q5T3J3	769 aa		4.01	□□□□□ -1.77
PHC3-212	ENST00000490723	FAM72A	Q5TYM5	149 aa		4.01	□□□□□ -1.77
PHC3-212	ENST00000490723	FAM72D	Q6L9T8	149 aa		4.01	□□□□□ -1.77
PHC3-212	ENST00000490723	PAPD4	Q6PIY7	484 aa	Known RBP	4.01	□□□□□ -1.77
PHC3-212	ENST00000490723	FAM72B	Q86X60	149 aa		4.01	□□□□□ -1.77
PHC3-212	ENST00000490723	ADSSL1	Q8N142	457 aa		4.01	□□□□□ -1.77
PHC3-212	ENST00000490723	HM13	Q8TCT9	377 aa		4.01	□□□□□ -1.77
PHC3-212	ENST00000490723	TMEM255B	Q8WV15	326 aa		4.01	□□□□□ -1.77
PHC3-212	ENST00000490723	SEMA3C	Q99985	751 aa		4.01	□□□□□ -1.77
PHC3-212	ENST00000490723	SCRT2	Q9NQ03	307 aa		4.01	□□□□□ -1.77
PHC3-212	ENST00000490723	TCP11L1	Q9NUJ3	509 aa		4.01	□□□□□ -1.77
PHC3-212	ENST00000490723	FAM118A	Q9NWS6	357 aa		4.01	□□□□□ -1.77
PHC3-212	ENST00000490723	CWC15	Q9P013	229 aa	Known RBP	4.01	□□□□□ -1.77
PHC3-212	ENST00000490723	MARCH4	Q9P2E8	410 aa	Predicted RBP	4.01	□□□□□ -1.77
PHC3-212	ENST00000490723	POLG2	Q9UHN1	485 aa		4.01	□□□□□ -1.77
PHC3-212	ENST00000490723	TCF19	Q9Y242	345 aa		4.01	□□□□□ -1.77
PHC3-212	ENST00000490723	IGLV5-45	A0A087WSX0	123 aa		4	□□□□□ -1.77
PHC3-212	ENST00000490723	CTAGE9	A4FU28	777 aa		4	□□□□□ -1.77
PHC3-212	ENST00000490723	OR5K3	A6NET4	321 aa		4	□□□□□ -1.77
PHC3-212	ENST00000490723	TMEM178B	H3BS89	294 aa		4	□□□□□ -1.77
PHC3-212	ENST00000490723	NDUFS3	O75489	264 aa		4	□□□□□ -1.77
PHC3-212	ENST00000490723	TBX18	O95935	607 aa		4	□□□□□ -1.77
PHC3-212	ENST00000490723	ICAM1	P05362	532 aa		4	□□□□□ -1.77
PHC3-212	ENST00000490723	CFC1B	P0CG36	223 aa		4	□□□□□ -1.77
PHC3-212	ENST00000490723	CFC1	P0CG37	223 aa		4	□□□□□ -1.77
PHC3-212	ENST00000490723	CTAGE8	P0CG41	777 aa		4	□□□□□ -1.77
PHC3-212	ENST00000490723	TIMP3	P35625	211 aa		4	□□□□□ -1.77
PHC3-212	ENST00000490723	GLIPR1	P48060	266 aa		4	□□□□□ -1.77
PHC3-212	ENST00000490723	ARCN1	P48444	511 aa	Known RBP	4	□□□□□ -1.77
PHC3-212	ENST00000490723	MMP14	P50281	582 aa		4	□□□□□ -1.77
PHC3-212	ENST00000490723	CRIP2	P52943	208 aa	Predicted RBP	4	□□□□□ -1.77
PHC3-212	ENST00000490723	RPL24	P83731	157 aa	Known RBP	4	□□□□□ -1.77
PHC3-212	ENST00000490723	RUNX1T1	Q06455	604 aa		4	□□□□□ -1.77
PHC3-212	ENST00000490723	SREBF2	Q12772	1141 aa		4	□□□□□ -1.77
PHC3-212	ENST00000490723	MRGPRG-AS1	Q2M3A8	158 aa		4	□□□□□ -1.77
PHC3-212	ENST00000490723	NSUN5P2	Q63ZY6	315 aa		4	□□□□□ -1.77
PHC3-212	ENST00000490723	SEPT14	Q6ZU15	432 aa		4	□□□□□ -1.77
PHC3-212	ENST00000490723	CTAGE4	Q8IX94	777 aa		4	□□□□□ -1.77
PHC3-212	ENST00000490723	PDILT	Q8N807	584 aa		4	□□□□□ -1.77
PHC3-212	ENST00000490723	OR8K5	Q8NH50	307 aa		4	□□□□□ -1.77
PHC3-212	ENST00000490723	TDRD7	Q8NHU6	1098 aa	Known RBP	4	□□□□□ -1.77
PHC3-212	ENST00000490723	ST6GAL2	Q96JF0	529 aa		4	□□□□□ -1.77
PHC3-212	ENST00000490723	ZNF354B	Q96LW1	612 aa		4	□□□□□ -1.77
PHC3-212	ENST00000490723	SIL1	Q9H173	461 aa		4	□□□□□ -1.77
PHC3-212	ENST00000490723	HCFC1R1	Q9NWW0	138 aa		4	□□□□□ -1.77
PHC3-212	ENST00000490723	EHD2	Q9NZN4	543 aa		4	□□□□□ -1.77
PHC3-212	ENST00000490723	GAB2	Q9UQC2	676 aa		4	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms