RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 PIK3CGP48736 1102 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 LIG3P49916 1009 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 AQP5P55064 265 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 TAS2R39P59534 338 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 CYP4F8P98187 520 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 PFKPQ01813 784 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 GSTM4Q03013 218 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 DLX2Q07687 328 aaPredicted RBP6.33□□□□□ -1.4
SF3A3-208ENST00000489537 GPM6BQ13491 265 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 ARHGEF7Q14155 803 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 MYLK3Q32MK0 819 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 TTC31Q49AM3 519 aaPredicted RBP6.33□□□□□ -1.4
SF3A3-208ENST00000489537 CARD16Q5EG05 197 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 TPRG1Q6ZUI0 275 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 KDELC2Q7Z4H8 507 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 SNX20Q7Z614 316 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 CMC1Q7Z7K0 106 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 DSG4Q86SJ6 1040 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 ADAMTSL2Q86TH1 951 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 MTDHQ86UE4 582 aaKnown RBP6.33□□□□□ -1.4
SF3A3-208ENST00000489537 ALYREFQ86V81 257 aaKnown RBP6.33□□□□□ -1.4
SF3A3-208ENST00000489537 TMPRSS6Q8IU80 811 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 DENND6AQ8IWF6 608 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 BBS7Q8IWZ6 715 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.33□□□□□ -1.4
SF3A3-208ENST00000489537 OR4K2Q8NGD2 314 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 CEP70Q8NHQ1 597 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 SHKBP1Q8TBC3 707 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 MAGEC3Q8TD91 643 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 SLC22A17Q8WUG5 538 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 AUTS2Q8WXX7 1259 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 SKA1Q96BD8 255 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 L3HYPDHQ96EM0 354 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 SCRN2Q96FV2 425 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 PPP1R16AQ96I34 528 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 DNAJC1Q96KC8 554 aaKnown RBP6.33□□□□□ -1.4
SF3A3-208ENST00000489537 ZNF778Q96MU6 729 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 ANKRD27Q96NW4 1050 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 AARSD1Q9BTE6 412 aaKnown RBP6.33□□□□□ -1.4
SF3A3-208ENST00000489537 BBS2Q9BXC9 721 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 C1QTNF1Q9BXJ1 281 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 SLC46A2Q9BY10 475 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 ZMYND15Q9H091 742 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 MYLK2Q9H1R3 596 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 TLE6Q9H808 572 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 PKD2L2Q9NZM6 624 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 IL17CQ9P0M4 197 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 NFKBIL1Q9UBC1 381 aaPredicted RBP6.33□□□□□ -1.4
SF3A3-208ENST00000489537 XPR1Q9UBH6 696 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 DKK3Q9UBP4 350 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 TAGLN3Q9UI15 199 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 TRMT6Q9UJA5 497 aaKnown RBP6.33□□□□□ -1.4
SF3A3-208ENST00000489537 DCTN4Q9UJW0 460 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 EMCNQ9ULC0 261 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 PLA2G4CQ9UP65 541 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 DNAJC16Q9Y2G8 782 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 SLC27A6Q9Y2P4 619 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 ZNF711Q9Y462 761 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 ZNF638Q14966 1978 aaKnown RBP6.33□□□□□ -1.4
SF3A3-208ENST00000489537 DOCK4Q8N1I0 1966 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 MYO18AQ92614 2054 aaKnown RBP6.32□□□□□ -1.4
SF3A3-208ENST00000489537 KIAA1671Q9BY89 1806 aa6.32□□□□□ -1.4
SF3A3-208ENST00000489537 CCDC162PA2VCL2 907 aa6.32□□□□□ -1.4
SF3A3-208ENST00000489537 FAM86C2PA6NEL3 165 aa6.32□□□□□ -1.4
SF3A3-208ENST00000489537 FOXO6A8MYZ6 492 aa6.32□□□□□ -1.4
SF3A3-208ENST00000489537 SPECC1L-ADORA2AF8WAN1 911 aa6.32□□□□□ -1.4
SF3A3-208ENST00000489537 H3BQ06 376 aaPredicted RBP6.32□□□□□ -1.4
SF3A3-208ENST00000489537 PSMD11O00231 422 aa6.32□□□□□ -1.4
SF3A3-208ENST00000489537 MUSKO15146 869 aa6.32□□□□□ -1.4
SF3A3-208ENST00000489537 GYG2O15488 501 aa6.32□□□□□ -1.4
SF3A3-208ENST00000489537 LINC01565O15544 149 aa6.32□□□□□ -1.4
SF3A3-208ENST00000489537 HOXC11O43248 304 aaPredicted RBP6.32□□□□□ -1.4
SF3A3-208ENST00000489537 SNAP91O60641 907 aa6.32□□□□□ -1.4
SF3A3-208ENST00000489537 KERAO60938 352 aa6.32□□□□□ -1.4
SF3A3-208ENST00000489537 CIB2O75838 187 aa6.32□□□□□ -1.4
SF3A3-208ENST00000489537 RHOBTB1O94844 696 aa6.32□□□□□ -1.4
SF3A3-208ENST00000489537 AP2A2O94973 939 aa6.32□□□□□ -1.4
SF3A3-208ENST00000489537 PRLP01236 227 aa6.32□□□□□ -1.4
SF3A3-208ENST00000489537 PRNPP04156 253 aa6.32□□□□□ -1.4
SF3A3-208ENST00000489537 THRAP10827 490 aa6.32□□□□□ -1.4
SF3A3-208ENST00000489537 TYRP14679 529 aa6.32□□□□□ -1.4
SF3A3-208ENST00000489537 IL9P15248 144 aa6.32□□□□□ -1.4
SF3A3-208ENST00000489537 ZNF37AP17032 561 aaPredicted RBP6.32□□□□□ -1.4
SF3A3-208ENST00000489537 VCLP18206 1134 aa6.32□□□□□ -1.4
SF3A3-208ENST00000489537 GABRB3P28472 473 aa6.32□□□□□ -1.4
SF3A3-208ENST00000489537 MZF1P28698 734 aaPredicted RBP6.32□□□□□ -1.4
SF3A3-208ENST00000489537 SERPINB3P29508 390 aa6.32□□□□□ -1.4
SF3A3-208ENST00000489537 MC4RP32245 332 aa6.32□□□□□ -1.4
SF3A3-208ENST00000489537 EIF2DP41214 584 aaKnown RBP6.32□□□□□ -1.4
SF3A3-208ENST00000489537 NSG1P42857 185 aa6.32□□□□□ -1.4
SF3A3-208ENST00000489537 CHRNA4P43681 627 aa6.32□□□□□ -1.4
SF3A3-208ENST00000489537 NAGLUP54802 743 aa6.32□□□□□ -1.4
SF3A3-208ENST00000489537 DCDC1P59894 354 aa6.32□□□□□ -1.4
SF3A3-208ENST00000489537 ERVFC1P60507 584 aa6.32□□□□□ -1.4
SF3A3-208ENST00000489537 HERVK_113P63132 956 aa6.32□□□□□ -1.4
SF3A3-208ENST00000489537 MPP1Q00013 466 aa6.32□□□□□ -1.4
SF3A3-208ENST00000489537 PLOD1Q02809 727 aaPredicted RBP6.32□□□□□ -1.4
SF3A3-208ENST00000489537 SFSWAPQ12872 951 aaKnown RBP6.32□□□□□ -1.4
SF3A3-208ENST00000489537 LMAN2Q12907 356 aa6.32□□□□□ -1.4
SF3A3-208ENST00000489537 OLIG2Q13516 323 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms