RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 UGT1A5P35504 534 aa13.88□□□□□ -0.19
VTI1A-206ENST00000489142 PPM1FP49593 454 aaPredicted RBP13.88□□□□□ -0.19
VTI1A-206ENST00000489142 CXADRP78310 365 aa13.88□□□□□ -0.19
VTI1A-206ENST00000489142 PPP2R5EQ16537 467 aa13.88□□□□□ -0.19
VTI1A-206ENST00000489142 SOWAHCQ53LP3 525 aaPredicted RBP13.88□□□□□ -0.19
VTI1A-206ENST00000489142 SIRPB2Q5JXA9 342 aa13.88□□□□□ -0.19
VTI1A-206ENST00000489142 ZNF569Q5MCW4 686 aa13.88□□□□□ -0.19
VTI1A-206ENST00000489142 CCDC70Q6NSX1 233 aa13.88□□□□□ -0.19
VTI1A-206ENST00000489142 BBS12Q6ZW61 710 aa13.88□□□□□ -0.19
VTI1A-206ENST00000489142 ZNF438Q7Z4V0 828 aa13.88□□□□□ -0.19
VTI1A-206ENST00000489142 KIAA1328Q86T90 577 aa13.88□□□□□ -0.19
VTI1A-206ENST00000489142 TMEM139Q8IV31 216 aa13.88□□□□□ -0.19
VTI1A-206ENST00000489142 SLITRK4Q8IW52 837 aa13.88□□□□□ -0.19
VTI1A-206ENST00000489142 RCBTB1Q8NDN9 531 aa13.88□□□□□ -0.19
VTI1A-206ENST00000489142 SLC37A2Q8TED4 501 aa13.88□□□□□ -0.19
VTI1A-206ENST00000489142 ALG3Q92685 438 aa13.88□□□□□ -0.19
VTI1A-206ENST00000489142 TMEM74Q96NL1 305 aa13.88□□□□□ -0.19
VTI1A-206ENST00000489142 BAG1Q99933 345 aaPredicted RBP13.88□□□□□ -0.19
VTI1A-206ENST00000489142 PRORYQ9H606 182 aa13.88□□□□□ -0.19
VTI1A-206ENST00000489142 VPS18Q9P253 973 aa13.88□□□□□ -0.19
VTI1A-206ENST00000489142 TBC1D29Q9UFV1 150 aa13.88□□□□□ -0.19
VTI1A-206ENST00000489142 RSPH14Q9UHP6 348 aa13.88□□□□□ -0.19
VTI1A-206ENST00000489142 LOXL2Q9Y4K0 774 aa13.88□□□□□ -0.19
VTI1A-206ENST00000489142 PCDHA3Q9Y5H8 950 aa13.88□□□□□ -0.19
VTI1A-206ENST00000489142 RGSL1A5PLK6 1076 aa13.87□□□□□ -0.19
VTI1A-206ENST00000489142 APOC4-APOC2K7ER74 178 aa13.87□□□□□ -0.19
VTI1A-206ENST00000489142 GPR39O43194 453 aa13.87□□□□□ -0.19
VTI1A-206ENST00000489142 BUD23O43709 281 aaKnown RBP13.87□□□□□ -0.19
VTI1A-206ENST00000489142 APOC2P02655 101 aa13.87□□□□□ -0.19
VTI1A-206ENST00000489142 CD1CP29017 333 aa13.87□□□□□ -0.19
VTI1A-206ENST00000489142 CCKBRP32239 447 aa13.87□□□□□ -0.19
VTI1A-206ENST00000489142 CSF2RBP32927 897 aa13.87□□□□□ -0.19
VTI1A-206ENST00000489142 ETV5P41161 510 aa13.87□□□□□ -0.19
VTI1A-206ENST00000489142 VAV2P52735 878 aa13.87□□□□□ -0.19
VTI1A-206ENST00000489142 OTUD4Q01804 1114 aaKnown RBP13.87□□□□□ -0.19
VTI1A-206ENST00000489142 ZFP36L1Q07352 338 aaKnown RBP13.87□□□□□ -0.19
VTI1A-206ENST00000489142 OLIG2Q13516 323 aa13.87□□□□□ -0.19
VTI1A-206ENST00000489142 SLC14A2Q15849 920 aa13.87□□□□□ -0.19
VTI1A-206ENST00000489142 KHDC1Q4VXA5 237 aaKnown RBP13.87□□□□□ -0.19
VTI1A-206ENST00000489142 ZNF574Q6ZN55 896 aaPredicted RBP13.87□□□□□ -0.19
VTI1A-206ENST00000489142 ADGRG6Q86SQ4 1221 aa13.87□□□□□ -0.19
VTI1A-206ENST00000489142 RAVER1Q8IY67 606 aaKnown RBP13.87□□□□□ -0.19
VTI1A-206ENST00000489142 LRRC57Q8N9N7 239 aa13.87□□□□□ -0.19
VTI1A-206ENST00000489142 ACTL9Q8TC94 416 aa13.87□□□□□ -0.19
VTI1A-206ENST00000489142 GORASP1Q9BQQ3 440 aa13.87□□□□□ -0.19
VTI1A-206ENST00000489142 OSBPL8Q9BZF1 889 aa13.87□□□□□ -0.19
VTI1A-206ENST00000489142 ZMYND15Q9H091 742 aa13.87□□□□□ -0.19
VTI1A-206ENST00000489142 OSGEPL1Q9H4B0 414 aa13.87□□□□□ -0.19
VTI1A-206ENST00000489142 TMEM9Q9P0T7 183 aa13.87□□□□□ -0.19
VTI1A-206ENST00000489142 TMPRSS11EQ9UL52 423 aa13.87□□□□□ -0.19
VTI1A-206ENST00000489142 PACSIN2Q9UNF0 486 aaPredicted RBP13.87□□□□□ -0.19
VTI1A-206ENST00000489142 LOC285095A0A1B0GVY8 99 aa13.86□□□□□ -0.19
VTI1A-206ENST00000489142 HACD1B0YJ81 288 aa13.86□□□□□ -0.19
VTI1A-206ENST00000489142 PJA2O43164 708 aa13.86□□□□□ -0.19
VTI1A-206ENST00000489142 MTSS1O43312 755 aa13.86□□□□□ -0.19
VTI1A-206ENST00000489142 GRID2O43424 1007 aa13.86□□□□□ -0.19
VTI1A-206ENST00000489142 NUAK1O60285 661 aa13.86□□□□□ -0.19
VTI1A-206ENST00000489142 CPNE6O95741 557 aa13.86□□□□□ -0.19
VTI1A-206ENST00000489142 FTCDO95954 541 aa13.86□□□□□ -0.19
VTI1A-206ENST00000489142 AGTP01019 485 aa13.86□□□□□ -0.19
VTI1A-206ENST00000489142 ITGA2BP08514 1039 aa13.86□□□□□ -0.19
VTI1A-206ENST00000489142 JMJD7P0C870 316 aa13.86□□□□□ -0.19
VTI1A-206ENST00000489142 CTNNA2P26232 953 aa13.86□□□□□ -0.19
VTI1A-206ENST00000489142 SLC5A2P31639 672 aa13.86□□□□□ -0.19
VTI1A-206ENST00000489142 MAPK10P53779 464 aa13.86□□□□□ -0.19
VTI1A-206ENST00000489142 DCDC1P59894 354 aa13.86□□□□□ -0.19
VTI1A-206ENST00000489142 CFHR1Q03591 330 aa13.86□□□□□ -0.19
VTI1A-206ENST00000489142 NFATC2Q13469 925 aa13.86□□□□□ -0.19
VTI1A-206ENST00000489142 LRP8Q14114 963 aa13.86□□□□□ -0.19
VTI1A-206ENST00000489142 PTPRCAPQ14761 206 aa13.86□□□□□ -0.19
VTI1A-206ENST00000489142 C16orf72Q14CZ0 275 aa13.86□□□□□ -0.19
VTI1A-206ENST00000489142 IGF2-ASQ6U949 168 aa13.86□□□□□ -0.19
VTI1A-206ENST00000489142 CLEC14AQ86T13 490 aa13.86□□□□□ -0.19
VTI1A-206ENST00000489142 PIM3Q86V86 326 aa13.86□□□□□ -0.19
VTI1A-206ENST00000489142 TRAM1L1Q8N609 369 aa13.86□□□□□ -0.19
VTI1A-206ENST00000489142 BLOC1S5Q8TDH9 187 aa13.86□□□□□ -0.19
VTI1A-206ENST00000489142 GLYATL1Q969I3 302 aa13.86□□□□□ -0.19
VTI1A-206ENST00000489142 CCDC74BQ96LY2 380 aa13.86□□□□□ -0.19
VTI1A-206ENST00000489142 FCRL5Q96RD9 977 aa13.86□□□□□ -0.19
VTI1A-206ENST00000489142 APOL2Q9BQE5 337 aa13.86□□□□□ -0.19
VTI1A-206ENST00000489142 ZSCAN5AQ9BUG6 496 aa13.86□□□□□ -0.19
VTI1A-206ENST00000489142 FICDQ9BVA6 458 aa13.86□□□□□ -0.19
VTI1A-206ENST00000489142 PRDM8Q9NQV8 689 aa13.86□□□□□ -0.19
VTI1A-206ENST00000489142 KCNK4Q9NYG8 393 aa13.86□□□□□ -0.19
VTI1A-206ENST00000489142 DNAJC16Q9Y2G8 782 aa13.86□□□□□ -0.19
VTI1A-206ENST00000489142 ADGRG1Q9Y653 693 aa13.86□□□□□ -0.19
VTI1A-206ENST00000489142 MGAQ8IWI9 3026 aa13.86□□□□□ -0.19
VTI1A-206ENST00000489142 ZNF106Q9H2Y7 1883 aaKnown RBP13.86□□□□□ -0.19
VTI1A-206ENST00000489142 IGHV1OR21-1A0A087WYE8 117 aa13.85□□□□□ -0.19
VTI1A-206ENST00000489142 PRAMEF33A0A0G2JMD5 474 aa13.85□□□□□ -0.19
VTI1A-206ENST00000489142 IGHV5-10-1A0A0J9YXX1 117 aa13.85□□□□□ -0.19
VTI1A-206ENST00000489142 BTNL10A8MVZ5 291 aa13.85□□□□□ -0.19
VTI1A-206ENST00000489142 TMX2-CTNND1H3BSU7 103 aa13.85□□□□□ -0.19
VTI1A-206ENST00000489142 PRAMEF10O60809 474 aa13.85□□□□□ -0.19
VTI1A-206ENST00000489142 PYGMP11217 842 aa13.85□□□□□ -0.19
VTI1A-206ENST00000489142 CA5AP35218 305 aa13.85□□□□□ -0.19
VTI1A-206ENST00000489142 TNNT3P45378 269 aaPredicted RBP13.85□□□□□ -0.19
VTI1A-206ENST00000489142 MAPK9P45984 424 aa13.85□□□□□ -0.19
VTI1A-206ENST00000489142 RWDD2BP57060 319 aa13.85□□□□□ -0.19
VTI1A-206ENST00000489142 EIF3EP60228 445 aaKnown RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms