RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 PLCL1Q15111 1095 aa19.4■□□□□ 0.7
HMG20B-213ENST00000488973 RABL3Q5HYI8 236 aa19.4■□□□□ 0.7
HMG20B-213ENST00000488973 RTL3Q8N8U3 475 aaKnown RBP19.4■□□□□ 0.7
HMG20B-213ENST00000488973 SH3RF2Q8TEC5 729 aa19.4■□□□□ 0.7
HMG20B-213ENST00000488973 GBF1Q92538 1859 aa19.4■□□□□ 0.7
HMG20B-213ENST00000488973 FCRL2Q96LA5 508 aaPredicted RBP19.4■□□□□ 0.7
HMG20B-213ENST00000488973 ZFYVE28Q9HCC9 887 aa19.4■□□□□ 0.7
HMG20B-213ENST00000488973 SELENONQ9NZV5 590 aa19.4■□□□□ 0.7
HMG20B-213ENST00000488973 SLC45A1Q9Y2W3 748 aa19.4■□□□□ 0.7
HMG20B-213ENST00000488973 PATJQ8NI35 1801 aa19.39■□□□□ 0.7
HMG20B-213ENST00000488973 ANKRD12Q6UB98 2062 aa19.39■□□□□ 0.7
HMG20B-213ENST00000488973 UBXN8O00124 270 aa19.39■□□□□ 0.69
HMG20B-213ENST00000488973 EEDO75530 441 aaKnown RBP19.39■□□□□ 0.69
HMG20B-213ENST00000488973 ALBP02768 609 aa19.39■□□□□ 0.69
HMG20B-213ENST00000488973 LINC00032P0C843 101 aa19.39■□□□□ 0.69
HMG20B-213ENST00000488973 MATN1P21941 496 aa19.39■□□□□ 0.69
HMG20B-213ENST00000488973 TRAF2Q12933 501 aa19.39■□□□□ 0.69
HMG20B-213ENST00000488973 CBX2Q14781 532 aaPredicted RBP19.39■□□□□ 0.69
HMG20B-213ENST00000488973 FXNQ16595 210 aa19.39■□□□□ 0.69
HMG20B-213ENST00000488973 PFKFB4Q16877 469 aa19.39■□□□□ 0.69
HMG20B-213ENST00000488973 PROSER1Q86XN7 944 aa19.39■□□□□ 0.69
HMG20B-213ENST00000488973 SFRP1Q8N474 314 aa19.39■□□□□ 0.69
HMG20B-213ENST00000488973 MYLPFQ96A32 169 aa19.39■□□□□ 0.69
HMG20B-213ENST00000488973 KCNA7Q96RP8 456 aa19.39■□□□□ 0.69
HMG20B-213ENST00000488973 TRIM8Q9BZR9 551 aa19.39■□□□□ 0.69
HMG20B-213ENST00000488973 SOX17Q9H6I2 414 aaPredicted RBP19.39■□□□□ 0.69
HMG20B-213ENST00000488973 RETREG1Q9H6L5 497 aa19.39■□□□□ 0.69
HMG20B-213ENST00000488973 POPDC3Q9HBV1 291 aa19.39■□□□□ 0.69
HMG20B-213ENST00000488973 MARCH4Q9P2E8 410 aaPredicted RBP19.39■□□□□ 0.69
HMG20B-213ENST00000488973 B3GNT3Q9Y2A9 372 aa19.39■□□□□ 0.69
HMG20B-213ENST00000488973 CRYL1Q9Y2S2 319 aa19.39■□□□□ 0.69
HMG20B-213ENST00000488973 NCK1P16333 377 aa19.39■□□□□ 0.69
HMG20B-213ENST00000488973 ZNF182P17025 639 aaPredicted RBP19.39■□□□□ 0.69
HMG20B-213ENST00000488973 PCSK1P29120 753 aa19.39■□□□□ 0.69
HMG20B-213ENST00000488973 CCR1P32246 355 aa19.39■□□□□ 0.69
HMG20B-213ENST00000488973 YAP1P46937 504 aaKnown RBP19.39■□□□□ 0.69
HMG20B-213ENST00000488973 BCAP31P51572 246 aa19.39■□□□□ 0.69
HMG20B-213ENST00000488973 RENBPP51606 427 aa19.39■□□□□ 0.69
HMG20B-213ENST00000488973 SUOXP51687 545 aa19.39■□□□□ 0.69
HMG20B-213ENST00000488973 ARSDP51689 593 aa19.39■□□□□ 0.69
HMG20B-213ENST00000488973 APLP1P51693 650 aa19.39■□□□□ 0.69
HMG20B-213ENST00000488973 DMPKQ09013 629 aa19.39■□□□□ 0.69
HMG20B-213ENST00000488973 OR4D1Q15615 310 aa19.39■□□□□ 0.69
HMG20B-213ENST00000488973 CHST15Q7LFX5 561 aaPredicted RBP19.39■□□□□ 0.69
HMG20B-213ENST00000488973 ZC3H7AQ8IWR0 971 aaKnown RBP19.39■□□□□ 0.69
HMG20B-213ENST00000488973 RYBPQ8N488 228 aaPredicted RBP19.39■□□□□ 0.69
HMG20B-213ENST00000488973 FNIP2Q9P278 1114 aa19.39■□□□□ 0.69
HMG20B-213ENST00000488973 CACNG4Q9UBN1 327 aa19.39■□□□□ 0.69
HMG20B-213ENST00000488973 DOCK4Q8N1I0 1966 aa19.38■□□□□ 0.69
HMG20B-213ENST00000488973 PTPRDP23468 1912 aa19.38■□□□□ 0.69
HMG20B-213ENST00000488973 ASPDHA6ND91 283 aa19.38■□□□□ 0.69
HMG20B-213ENST00000488973 SULT1C4O75897 302 aa19.38■□□□□ 0.69
HMG20B-213ENST00000488973 BCL10O95999 233 aa19.38■□□□□ 0.69
HMG20B-213ENST00000488973 PEX11BO96011 259 aa19.38■□□□□ 0.69
HMG20B-213ENST00000488973 PRR35P0CG20 571 aa19.38■□□□□ 0.69
HMG20B-213ENST00000488973 BDNFP23560 247 aa19.38■□□□□ 0.69
HMG20B-213ENST00000488973 HTR1EP28566 365 aa19.38■□□□□ 0.69
HMG20B-213ENST00000488973 POLR2IP36954 125 aaKnown RBP19.38■□□□□ 0.69
HMG20B-213ENST00000488973 KCNC4Q03721 635 aa19.38■□□□□ 0.69
HMG20B-213ENST00000488973 LCP2Q13094 533 aa19.38■□□□□ 0.69
HMG20B-213ENST00000488973 BROXQ5VW32 411 aa19.38■□□□□ 0.69
HMG20B-213ENST00000488973 RAB2BQ8WUD1 216 aa19.38■□□□□ 0.69
HMG20B-213ENST00000488973 BIRC7Q96CA5 298 aa19.38■□□□□ 0.69
HMG20B-213ENST00000488973 NRBF2Q96F24 287 aa19.38■□□□□ 0.69
HMG20B-213ENST00000488973 NSUN5Q96P11 429 aaKnown RBP19.38■□□□□ 0.69
HMG20B-213ENST00000488973 ATOH8Q96SQ7 321 aa19.38■□□□□ 0.69
HMG20B-213ENST00000488973 MTG1Q9BT17 334 aaPredicted RBP19.38■□□□□ 0.69
HMG20B-213ENST00000488973 TFB2MQ9H5Q4 396 aaKnown RBP19.38■□□□□ 0.69
HMG20B-213ENST00000488973 GPN2Q9H9Y4 310 aaPredicted RBP19.38■□□□□ 0.69
HMG20B-213ENST00000488973 LRRC14BA6NHZ5 514 aa19.37■□□□□ 0.69
HMG20B-213ENST00000488973 SLC4A1P02730 911 aa19.37■□□□□ 0.69
HMG20B-213ENST00000488973 CYBBP04839 570 aa19.37■□□□□ 0.69
HMG20B-213ENST00000488973 ZNF37AP17032 561 aaPredicted RBP19.37■□□□□ 0.69
HMG20B-213ENST00000488973 CD86P42081 329 aa19.37■□□□□ 0.69
HMG20B-213ENST00000488973 DIO3P55073 304 aa19.37■□□□□ 0.69
HMG20B-213ENST00000488973 TIAL1Q01085 375 aaKnown RBP eCLIP19.37■□□□□ 0.69
HMG20B-213ENST00000488973 NDUFA5Q16718 116 aa19.37■□□□□ 0.69
HMG20B-213ENST00000488973 TWF2Q6IBS0 349 aaKnown RBP19.37■□□□□ 0.69
HMG20B-213ENST00000488973 ZNF549Q6P9A3 640 aa19.37■□□□□ 0.69
HMG20B-213ENST00000488973 TBPL2Q6SJ96 375 aa19.37■□□□□ 0.69
HMG20B-213ENST00000488973 GPRC5AQ8NFJ5 357 aa19.37■□□□□ 0.69
HMG20B-213ENST00000488973 BPIFB1Q8TDL5 484 aa19.37■□□□□ 0.69
HMG20B-213ENST00000488973 PPP1R13LQ8WUF5 828 aa19.37■□□□□ 0.69
HMG20B-213ENST00000488973 FATE1Q969F0 183 aa19.37■□□□□ 0.69
HMG20B-213ENST00000488973 NDEL1Q9GZM8 345 aa19.37■□□□□ 0.69
HMG20B-213ENST00000488973 FANCEQ9HB96 536 aa19.37■□□□□ 0.69
HMG20B-213ENST00000488973 AIG1Q9NVV5 245 aa19.37■□□□□ 0.69
HMG20B-213ENST00000488973 LEF1Q9UJU2 399 aaPredicted RBP19.37■□□□□ 0.69
HMG20B-213ENST00000488973 PRELID1Q9Y255 219 aa19.37■□□□□ 0.69
HMG20B-213ENST00000488973 BTRCQ9Y297 605 aa19.37■□□□□ 0.69
HMG20B-213ENST00000488973 H3BMM5 538 aa19.37■□□□□ 0.69
HMG20B-213ENST00000488973 K7EPI3 171 aa19.37■□□□□ 0.69
HMG20B-213ENST00000488973 F2P00734 622 aa19.37■□□□□ 0.69
HMG20B-213ENST00000488973 FUCA1P04066 466 aa19.37■□□□□ 0.69
HMG20B-213ENST00000488973 SLC2A3P11169 496 aa19.37■□□□□ 0.69
HMG20B-213ENST00000488973 ENDOUP21128 410 aaKnown RBP19.37■□□□□ 0.69
HMG20B-213ENST00000488973 ZFP36L2P47974 494 aaKnown RBP19.37■□□□□ 0.69
HMG20B-213ENST00000488973 FKBP1BP68106 108 aa19.37■□□□□ 0.69
HMG20B-213ENST00000488973 CLCQ05315 142 aa19.37■□□□□ 0.69
HMG20B-213ENST00000488973 PAGE3Q5JUK9 113 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms