RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 LVRNQ6Q4G3 990 aa18.47■□□□□ 0.55
PTCD3-217ENST00000488801 PPP1R21Q6ZMI0 780 aa18.47■□□□□ 0.55
PTCD3-217ENST00000488801 ZNF572Q7Z3I7 529 aaPredicted RBP18.47■□□□□ 0.55
PTCD3-217ENST00000488801 ADGRG6Q86SQ4 1221 aa18.47■□□□□ 0.55
PTCD3-217ENST00000488801 NRROSQ86YC3 692 aa18.47■□□□□ 0.55
PTCD3-217ENST00000488801 PHYKPLQ8IUZ5 450 aa18.47■□□□□ 0.55
PTCD3-217ENST00000488801 OR13J1Q8NGT2 312 aa18.47■□□□□ 0.55
PTCD3-217ENST00000488801 STYXQ8WUJ0 223 aa18.47■□□□□ 0.55
PTCD3-217ENST00000488801 PEX13Q92968 403 aa18.47■□□□□ 0.55
PTCD3-217ENST00000488801 C16orf45Q96MC5 204 aaPredicted RBP18.47■□□□□ 0.55
PTCD3-217ENST00000488801 RMI1Q9H9A7 625 aa18.47■□□□□ 0.55
PTCD3-217ENST00000488801 CARS2Q9HA77 564 aaKnown RBP18.47■□□□□ 0.55
PTCD3-217ENST00000488801 TRIM39Q9HCM9 518 aa18.47■□□□□ 0.55
PTCD3-217ENST00000488801 ATXN10Q9UBB4 475 aa18.47■□□□□ 0.55
PTCD3-217ENST00000488801 APPL1Q9UKG1 709 aa18.47■□□□□ 0.55
PTCD3-217ENST00000488801 SPAARA0A1B0GVQ0 90 aa18.46■□□□□ 0.55
PTCD3-217ENST00000488801 PRR19A6NJB7 356 aa18.46■□□□□ 0.55
PTCD3-217ENST00000488801 YY2O15391 372 aa18.46■□□□□ 0.55
PTCD3-217ENST00000488801 TNFSF14O43557 240 aa18.46■□□□□ 0.55
PTCD3-217ENST00000488801 NUAK1O60285 661 aa18.46■□□□□ 0.55
PTCD3-217ENST00000488801 SRP72O76094 671 aaKnown RBP18.46■□□□□ 0.55
PTCD3-217ENST00000488801 IVDP26440 423 aa18.46■□□□□ 0.55
PTCD3-217ENST00000488801 MAGEA3P43357 314 aa18.46■□□□□ 0.55
PTCD3-217ENST00000488801 LMAN1P49257 510 aa18.46■□□□□ 0.55
PTCD3-217ENST00000488801 ACADVLP49748 655 aa18.46■□□□□ 0.55
PTCD3-217ENST00000488801 VPS41P49754 854 aa18.46■□□□□ 0.55
PTCD3-217ENST00000488801 NFATC2Q13469 925 aa18.46■□□□□ 0.55
PTCD3-217ENST00000488801 DEFB133Q30KQ1 61 aa18.46■□□□□ 0.55
PTCD3-217ENST00000488801 ZCCHC8Q6NZY4 707 aaKnown RBP18.46■□□□□ 0.55
PTCD3-217ENST00000488801 LRRC8BQ6P9F7 803 aa18.46■□□□□ 0.55
PTCD3-217ENST00000488801 ERMP1Q7Z2K6 904 aa18.46■□□□□ 0.55
PTCD3-217ENST00000488801 RD3Q7Z3Z2 195 aa18.46■□□□□ 0.55
PTCD3-217ENST00000488801 DNAAF3Q8N9W5 541 aa18.46■□□□□ 0.55
PTCD3-217ENST00000488801 MCUQ8NE86 351 aa18.46■□□□□ 0.55
PTCD3-217ENST00000488801 CCL4L1Q8NHW4 92 aa18.46■□□□□ 0.55
PTCD3-217ENST00000488801 CNDP2Q96KP4 475 aaKnown RBP18.46■□□□□ 0.55
PTCD3-217ENST00000488801 RUNDC3BQ96NL0 473 aa18.46■□□□□ 0.55
PTCD3-217ENST00000488801 OR2M4Q96R27 311 aa18.46■□□□□ 0.55
PTCD3-217ENST00000488801 TCAF1Q9Y4C2 921 aa18.46■□□□□ 0.55
PTCD3-217ENST00000488801 HEATR9A2RTY3 570 aa18.45■□□□□ 0.54
PTCD3-217ENST00000488801 SLC25A14O95258 325 aaPredicted RBP18.45■□□□□ 0.54
PTCD3-217ENST00000488801 LDOC1O95751 146 aaPredicted RBP18.45■□□□□ 0.54
PTCD3-217ENST00000488801 ALPPL2P10696 532 aa18.45■□□□□ 0.54
PTCD3-217ENST00000488801 CKMT1AP12532 417 aa18.45■□□□□ 0.54
PTCD3-217ENST00000488801 ZNF8P17098 575 aaPredicted RBP18.45■□□□□ 0.54
PTCD3-217ENST00000488801 ACP1P24666 158 aa18.45■□□□□ 0.54
PTCD3-217ENST00000488801 ADCY8P40145 1251 aa18.45■□□□□ 0.54
PTCD3-217ENST00000488801 GNPDA1P46926 289 aa18.45■□□□□ 0.54
PTCD3-217ENST00000488801 SIM1P81133 766 aaPredicted RBP18.45■□□□□ 0.54
PTCD3-217ENST00000488801 LRP8Q14114 963 aa18.45■□□□□ 0.54
PTCD3-217ENST00000488801 ZNF648Q5T619 568 aaPredicted RBP18.45■□□□□ 0.54
PTCD3-217ENST00000488801 RNASEH2BQ5TBB1 312 aaKnown RBP18.45■□□□□ 0.54
PTCD3-217ENST00000488801 ARMC3Q5W041 872 aa18.45■□□□□ 0.54
PTCD3-217ENST00000488801 CAND1Q86VP6 1230 aaKnown RBP18.45■□□□□ 0.54
PTCD3-217ENST00000488801 GKN2Q86XP6 184 aa18.45■□□□□ 0.54
PTCD3-217ENST00000488801 NAT8LQ8N9F0 302 aa18.45■□□□□ 0.54
PTCD3-217ENST00000488801 CDKN2AIPNLQ96HQ2 116 aa18.45■□□□□ 0.54
PTCD3-217ENST00000488801 APOLD1Q96LR9 279 aa18.45■□□□□ 0.54
PTCD3-217ENST00000488801 CEP295Q9C0D2 2601 aa18.45■□□□□ 0.54
PTCD3-217ENST00000488801 AP3B1O00203 1094 aa18.44■□□□□ 0.54
PTCD3-217ENST00000488801 CCL22O00626 93 aa18.44■□□□□ 0.54
PTCD3-217ENST00000488801 VEGFDO43915 354 aa18.44■□□□□ 0.54
PTCD3-217ENST00000488801 UGT1A9O60656 530 aa18.44■□□□□ 0.54
PTCD3-217ENST00000488801 ANXA6P08133 673 aa18.44■□□□□ 0.54
PTCD3-217ENST00000488801 FTH1P19P0C7X4 201 aa18.44■□□□□ 0.54
PTCD3-217ENST00000488801 CTSEP14091 401 aa18.44■□□□□ 0.54
PTCD3-217ENST00000488801 UGT1A6P19224 532 aa18.44■□□□□ 0.54
PTCD3-217ENST00000488801 UGT1A1P22309 533 aa18.44■□□□□ 0.54
PTCD3-217ENST00000488801 UGT1A4P22310 534 aa18.44■□□□□ 0.54
PTCD3-217ENST00000488801 ADRA1DP25100 572 aa18.44■□□□□ 0.54
PTCD3-217ENST00000488801 UGT1A3P35503 534 aa18.44■□□□□ 0.54
PTCD3-217ENST00000488801 UGT1A5P35504 534 aa18.44■□□□□ 0.54
PTCD3-217ENST00000488801 PAFAH1B1P43034 410 aa18.44■□□□□ 0.54
PTCD3-217ENST00000488801 ARSDP51689 593 aa18.44■□□□□ 0.54
PTCD3-217ENST00000488801 SEPT6Q14141 434 aa18.44■□□□□ 0.54
PTCD3-217ENST00000488801 CCDC38Q502W7 563 aa18.44■□□□□ 0.54
PTCD3-217ENST00000488801 GPRC6AQ5T6X5 926 aa18.44■□□□□ 0.54
PTCD3-217ENST00000488801 TSTD2Q5T7W7 516 aa18.44■□□□□ 0.54
PTCD3-217ENST00000488801 SYDE1Q6ZW31 735 aaPredicted RBP18.44■□□□□ 0.54
PTCD3-217ENST00000488801 MICALCLQ6ZW33 695 aa18.44■□□□□ 0.54
PTCD3-217ENST00000488801 SNX20Q7Z614 316 aa18.44■□□□□ 0.54
PTCD3-217ENST00000488801 SLCO6A1Q86UG4 719 aa18.44■□□□□ 0.54
PTCD3-217ENST00000488801 JAMLQ86YT9 394 aa18.44■□□□□ 0.54
PTCD3-217ENST00000488801 GALNT13Q8IUC8 556 aa18.44■□□□□ 0.54
PTCD3-217ENST00000488801 ZNF547Q8IVP9 402 aa18.44■□□□□ 0.54
PTCD3-217ENST00000488801 SLC35F3Q8IY50 421 aa18.44■□□□□ 0.54
PTCD3-217ENST00000488801 ZNF398Q8TD17 642 aa18.44■□□□□ 0.54
PTCD3-217ENST00000488801 SGSM3Q96HU1 749 aa18.44■□□□□ 0.54
PTCD3-217ENST00000488801 ZNF778Q96MU6 729 aa18.44■□□□□ 0.54
PTCD3-217ENST00000488801 IL22Q9GZX6 179 aa18.44■□□□□ 0.54
PTCD3-217ENST00000488801 OR2AG1Q9H205 316 aa18.44■□□□□ 0.54
PTCD3-217ENST00000488801 UGT1A7Q9HAW7 530 aa18.44■□□□□ 0.54
PTCD3-217ENST00000488801 UGT1A10Q9HAW8 530 aa18.44■□□□□ 0.54
PTCD3-217ENST00000488801 UGT1A8Q9HAW9 530 aa18.44■□□□□ 0.54
PTCD3-217ENST00000488801 MRM3Q9HC36 420 aaKnown RBP18.44■□□□□ 0.54
PTCD3-217ENST00000488801 ARFGAP3Q9NP61 516 aa18.44■□□□□ 0.54
PTCD3-217ENST00000488801 TREX1Q9NSU2 369 aa18.44■□□□□ 0.54
PTCD3-217ENST00000488801 WASF3Q9UPY6 502 aa18.44■□□□□ 0.54
PTCD3-217ENST00000488801 PCDHGA1Q9Y5H4 931 aa18.44■□□□□ 0.54
PTCD3-217ENST00000488801 IGLV3-16A0A075B6K0 115 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms