RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 Q9H521 79 aa12.6□□□□□ -0.39
CLIC4-202ENST00000488683 NUP214P35658 2090 aaPredicted RBP12.6□□□□□ -0.39
CLIC4-202ENST00000488683 KRT87PA6NCN2 255 aa12.59□□□□□ -0.39
CLIC4-202ENST00000488683 MOXD2PA6NHM9 499 aa12.59□□□□□ -0.39
CLIC4-202ENST00000488683 TMEM189-UBE2V1I3L0A0 370 aa12.59□□□□□ -0.39
CLIC4-202ENST00000488683 ANGPT2O15123 496 aa12.59□□□□□ -0.39
CLIC4-202ENST00000488683 INPP4BO15327 924 aa12.59□□□□□ -0.39
CLIC4-202ENST00000488683 HTRA2O43464 458 aaPredicted RBP12.59□□□□□ -0.39
CLIC4-202ENST00000488683 OR4F21O95013 312 aa12.59□□□□□ -0.39
CLIC4-202ENST00000488683 GUCA1CO95843 209 aa12.59□□□□□ -0.39
CLIC4-202ENST00000488683 PENKP01210 267 aaPredicted RBP12.59□□□□□ -0.39
CLIC4-202ENST00000488683 KLKB1P03952 638 aa12.59□□□□□ -0.39
CLIC4-202ENST00000488683 ALPIP09923 528 aa12.59□□□□□ -0.39
CLIC4-202ENST00000488683 HLA-DPA1P20036 260 aa12.59□□□□□ -0.39
CLIC4-202ENST00000488683 RPL5P46777 297 aaKnown RBP12.59□□□□□ -0.39
CLIC4-202ENST00000488683 HTR6P50406 440 aa12.59□□□□□ -0.39
CLIC4-202ENST00000488683 LSAMPQ13449 338 aa12.59□□□□□ -0.39
CLIC4-202ENST00000488683 ATXN7L2Q5T6C5 722 aaPredicted RBP12.59□□□□□ -0.39
CLIC4-202ENST00000488683 MRNIPQ6NTE8 343 aa12.59□□□□□ -0.39
CLIC4-202ENST00000488683 RGMBQ6NW40 437 aa12.59□□□□□ -0.39
CLIC4-202ENST00000488683 SAPCD2Q86UD0 394 aa12.59□□□□□ -0.39
CLIC4-202ENST00000488683 CHERPQ8IWX8 916 aaKnown RBP12.59□□□□□ -0.39
CLIC4-202ENST00000488683 TLR8Q9NR97 1041 aaKnown RBP12.59□□□□□ -0.39
CLIC4-202ENST00000488683 DUS2Q9NX74 493 aaKnown RBP12.59□□□□□ -0.39
CLIC4-202ENST00000488683 RANBP2P49792 3224 aaKnown RBP12.59□□□□□ -0.39
CLIC4-202ENST00000488683 TMEM88BA6NKF7 163 aa12.59□□□□□ -0.39
CLIC4-202ENST00000488683 PRLP01236 227 aa12.59□□□□□ -0.39
CLIC4-202ENST00000488683 RPLP2P05387 115 aaKnown RBP12.59□□□□□ -0.39
CLIC4-202ENST00000488683 SERPINF2P08697 491 aa12.59□□□□□ -0.39
CLIC4-202ENST00000488683 CNPP09543 421 aaKnown RBP12.59□□□□□ -0.39
CLIC4-202ENST00000488683 PCNAP12004 261 aa12.59□□□□□ -0.39
CLIC4-202ENST00000488683 IL12AP29459 219 aa12.59□□□□□ -0.39
CLIC4-202ENST00000488683 MAGEA11P43364 429 aa12.59□□□□□ -0.39
CLIC4-202ENST00000488683 ACADVLP49748 655 aa12.59□□□□□ -0.39
CLIC4-202ENST00000488683 C11orf91Q3C1V1 193 aa12.59□□□□□ -0.39
CLIC4-202ENST00000488683 KANK2Q63ZY3 851 aa12.59□□□□□ -0.39
CLIC4-202ENST00000488683 SLC2A7Q6PXP3 512 aa12.59□□□□□ -0.39
CLIC4-202ENST00000488683 TAS2R42Q7RTR8 314 aa12.59□□□□□ -0.39
CLIC4-202ENST00000488683 CMTR2Q8IYT2 770 aaKnown RBP12.59□□□□□ -0.39
CLIC4-202ENST00000488683 AHI1Q8N157 1196 aa12.59□□□□□ -0.39
CLIC4-202ENST00000488683 PLEKHG4BQ96PX9 1271 aa12.59□□□□□ -0.39
CLIC4-202ENST00000488683 CCT7Q99832 543 aa12.59□□□□□ -0.39
CLIC4-202ENST00000488683 TDRD1Q9BXT4 1180 aaKnown RBP12.59□□□□□ -0.39
CLIC4-202ENST00000488683 K7ERQ8 282 aa12.58□□□□□ -0.4
CLIC4-202ENST00000488683 TNFAIP8O95379 198 aa12.58□□□□□ -0.4
CLIC4-202ENST00000488683 EOMESO95936 686 aa12.58□□□□□ -0.4
CLIC4-202ENST00000488683 SLC6A2P23975 617 aa12.58□□□□□ -0.4
CLIC4-202ENST00000488683 SLC5A2P31639 672 aa12.58□□□□□ -0.4
CLIC4-202ENST00000488683 GDF5P43026 501 aa12.58□□□□□ -0.4
CLIC4-202ENST00000488683 DGKQP52824 942 aa12.58□□□□□ -0.4
CLIC4-202ENST00000488683 TRAP1Q12931 704 aaKnown RBP12.58□□□□□ -0.4
CLIC4-202ENST00000488683 MRPL58Q14197 206 aaKnown RBP12.58□□□□□ -0.4
CLIC4-202ENST00000488683 SELPLGQ14242 412 aa12.58□□□□□ -0.4
CLIC4-202ENST00000488683 PLCL1Q15111 1095 aa12.58□□□□□ -0.4
CLIC4-202ENST00000488683 TYSND1Q2T9J0 566 aa12.58□□□□□ -0.4
CLIC4-202ENST00000488683 SAMD4BQ5PRF9 694 aaKnown RBP12.58□□□□□ -0.4
CLIC4-202ENST00000488683 KRT80Q6KB66 452 aa12.58□□□□□ -0.4
CLIC4-202ENST00000488683 FUBP1Q96AE4 644 aaKnown RBP12.58□□□□□ -0.4
CLIC4-202ENST00000488683 ZNF597Q96LX8 424 aa12.58□□□□□ -0.4
CLIC4-202ENST00000488683 GPATCH1Q9BRR8 931 aaKnown RBP12.58□□□□□ -0.4
CLIC4-202ENST00000488683 ZNF696Q9H7X3 374 aa12.58□□□□□ -0.4
CLIC4-202ENST00000488683 OLAHQ9NV23 265 aa12.58□□□□□ -0.4
CLIC4-202ENST00000488683 SMOXQ9NWM0 555 aa12.58□□□□□ -0.4
CLIC4-202ENST00000488683 ZMYM5Q9UJ78 669 aa12.58□□□□□ -0.4
CLIC4-202ENST00000488683 OAZ3Q9UMX2 235 aa12.58□□□□□ -0.4
CLIC4-202ENST00000488683 SMIM31A0A1B0GVY4 71 aa12.58□□□□□ -0.4
CLIC4-202ENST00000488683 F5H5T6 163 aa12.58□□□□□ -0.4
CLIC4-202ENST00000488683 DLGAP1O14490 977 aa12.58□□□□□ -0.4
CLIC4-202ENST00000488683 INSIG1O15503 277 aa12.58□□□□□ -0.4
CLIC4-202ENST00000488683 HNRNPRO43390 633 aaKnown RBP12.58□□□□□ -0.4
CLIC4-202ENST00000488683 NDUFS3O75489 264 aa12.58□□□□□ -0.4
CLIC4-202ENST00000488683 FGF4P08620 206 aa12.58□□□□□ -0.4
CLIC4-202ENST00000488683 SLC7A1P30825 629 aa12.58□□□□□ -0.4
CLIC4-202ENST00000488683 MC4RP32245 332 aa12.58□□□□□ -0.4
CLIC4-202ENST00000488683 SLC11A1P49279 550 aa12.58□□□□□ -0.4
CLIC4-202ENST00000488683 ATP4BP51164 291 aa12.58□□□□□ -0.4
CLIC4-202ENST00000488683 ZNF140P52738 457 aaPredicted RBP12.58□□□□□ -0.4
CLIC4-202ENST00000488683 GNA12Q03113 381 aa12.58□□□□□ -0.4
CLIC4-202ENST00000488683 APOFQ13790 326 aa12.58□□□□□ -0.4
CLIC4-202ENST00000488683 RBBP5Q15291 538 aaKnown RBP12.58□□□□□ -0.4
CLIC4-202ENST00000488683 ZIK1Q3SY52 487 aaPredicted RBP12.58□□□□□ -0.4
CLIC4-202ENST00000488683 ANKRD34AQ69YU3 496 aa12.58□□□□□ -0.4
CLIC4-202ENST00000488683 HACD2Q6Y1H2 254 aa12.58□□□□□ -0.4
CLIC4-202ENST00000488683 MIER2Q8N344 545 aa12.58□□□□□ -0.4
CLIC4-202ENST00000488683 CLDN19Q8N6F1 224 aa12.58□□□□□ -0.4
CLIC4-202ENST00000488683 TRIML2Q8N7C3 387 aa12.58□□□□□ -0.4
CLIC4-202ENST00000488683 TSPAN14Q8NG11 270 aa12.58□□□□□ -0.4
CLIC4-202ENST00000488683 CYGBQ8WWM9 190 aa12.58□□□□□ -0.4
CLIC4-202ENST00000488683 TOP1MTQ969P6 601 aa12.58□□□□□ -0.4
CLIC4-202ENST00000488683 BIRC8Q96P09 236 aa12.58□□□□□ -0.4
CLIC4-202ENST00000488683 CINPQ9BW66 212 aaPredicted RBP12.58□□□□□ -0.4
CLIC4-202ENST00000488683 TM6SF2Q9BZW4 377 aa12.58□□□□□ -0.4
CLIC4-202ENST00000488683 RBM38Q9H0Z9 239 aaKnown RBP12.58□□□□□ -0.4
CLIC4-202ENST00000488683 NDUFAF1Q9Y375 327 aa12.58□□□□□ -0.4
CLIC4-202ENST00000488683 THSD7BQ9C0I4 1608 aa12.57□□□□□ -0.4
CLIC4-202ENST00000488683 C2orf78A6NCI8 922 aa12.57□□□□□ -0.4
CLIC4-202ENST00000488683 ARPC2O15144 300 aa12.57□□□□□ -0.4
CLIC4-202ENST00000488683 B4GAT1O43505 415 aa12.57□□□□□ -0.4
CLIC4-202ENST00000488683 MAPKAPK2P49137 400 aa12.57□□□□□ -0.4
CLIC4-202ENST00000488683 YBEYP58557 167 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms