RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 KLHL29Q96CT2 875 aa3.86□□□□□ -1.79
SMC4-219ENST00000487747 KIF1BPQ96EK5 621 aa3.86□□□□□ -1.79
SMC4-219ENST00000487747 APOPT1Q96IL0 206 aa3.86□□□□□ -1.79
SMC4-219ENST00000487747 PCGF1Q9BSM1 259 aa3.86□□□□□ -1.79
SMC4-219ENST00000487747 CACNG5Q9UF02 275 aa3.86□□□□□ -1.79
SMC4-219ENST00000487747 ACAD8Q9UKU7 415 aa3.86□□□□□ -1.79
SMC4-219ENST00000487747 AAR2Q9Y312 384 aaKnown RBP3.86□□□□□ -1.79
SMC4-219ENST00000487747 RNF215Q9Y6U7 377 aa3.86□□□□□ -1.79
SMC4-219ENST00000487747 DUXAA6NLW8 204 aa3.85□□□□□ -1.79
SMC4-219ENST00000487747 ANKRD28O15084 1053 aa3.85□□□□□ -1.79
SMC4-219ENST00000487747 CSF2RAP15509 400 aa3.85□□□□□ -1.79
SMC4-219ENST00000487747 IL7RP16871 459 aa3.85□□□□□ -1.79
SMC4-219ENST00000487747 ZNF10P21506 573 aaPredicted RBP3.85□□□□□ -1.79
SMC4-219ENST00000487747 RPP30P78346 268 aaKnown RBP3.85□□□□□ -1.79
SMC4-219ENST00000487747 MBTD1Q05BQ5 628 aa3.85□□□□□ -1.79
SMC4-219ENST00000487747 PPFIA1Q13136 1202 aa3.85□□□□□ -1.79
SMC4-219ENST00000487747 ZNF790Q6PG37 636 aa3.85□□□□□ -1.79
SMC4-219ENST00000487747 PLXDC2Q6UX71 529 aa3.85□□□□□ -1.79
SMC4-219ENST00000487747 MAELQ96JY0 434 aaKnown RBP3.85□□□□□ -1.79
SMC4-219ENST00000487747 PSD2Q9BQI7 771 aa3.85□□□□□ -1.79
SMC4-219ENST00000487747 TMEM47Q9BQJ4 181 aa3.85□□□□□ -1.79
SMC4-219ENST00000487747 PDZD7Q9H5P4 517 aa3.85□□□□□ -1.79
SMC4-219ENST00000487747 KIF9Q9HAQ2 790 aa3.85□□□□□ -1.79
SMC4-219ENST00000487747 SLC28A3Q9HAS3 691 aa3.85□□□□□ -1.79
SMC4-219ENST00000487747 TRPC7Q9HCX4 862 aa3.85□□□□□ -1.79
SMC4-219ENST00000487747 JRKLQ9Y4A0 524 aa3.85□□□□□ -1.79
SMC4-219ENST00000487747 DISP3Q9P2K9 1392 aa3.85□□□□□ -1.79
SMC4-219ENST00000487747 TMEM178BH3BS89 294 aa3.84□□□□□ -1.79
SMC4-219ENST00000487747 KCNN4O15554 427 aa3.84□□□□□ -1.79
SMC4-219ENST00000487747 SYNCRIPO60506 623 aaKnown RBP3.84□□□□□ -1.79
SMC4-219ENST00000487747 KCNK5O95279 499 aa3.84□□□□□ -1.79
SMC4-219ENST00000487747 HOXB5P09067 269 aa3.84□□□□□ -1.79
SMC4-219ENST00000487747 HNRNPA1P09651 372 aaKnown RBP eCLIP3.84□□□□□ -1.79
SMC4-219ENST00000487747 MSH3P20585 1137 aa3.84□□□□□ -1.79
SMC4-219ENST00000487747 UGT1A1P22309 533 aa3.84□□□□□ -1.79
SMC4-219ENST00000487747 CNTFP26441 200 aa3.84□□□□□ -1.79
SMC4-219ENST00000487747 UBA7P41226 1012 aa3.84□□□□□ -1.79
SMC4-219ENST00000487747 HALP42357 657 aa3.84□□□□□ -1.79
SMC4-219ENST00000487747 NOVP48745 357 aa3.84□□□□□ -1.79
SMC4-219ENST00000487747 PRICKLE4Q2TBC4 344 aa3.84□□□□□ -1.79
SMC4-219ENST00000487747 ZFP69Q49AA0 526 aa3.84□□□□□ -1.79
SMC4-219ENST00000487747 SUSD1Q6UWL2 747 aa3.84□□□□□ -1.79
SMC4-219ENST00000487747 OR14L1PQ8NHC6 308 aa3.84□□□□□ -1.79
SMC4-219ENST00000487747 PHF21AQ96BD5 680 aa3.84□□□□□ -1.79
SMC4-219ENST00000487747 ZNF689Q96CS4 500 aaPredicted RBP3.84□□□□□ -1.79
SMC4-219ENST00000487747 USP44Q9H0E7 712 aa3.84□□□□□ -1.79
SMC4-219ENST00000487747 LTB4R2Q9NPC1 389 aa3.84□□□□□ -1.79
SMC4-219ENST00000487747 MPP6Q9NZW5 540 aa3.84□□□□□ -1.79
SMC4-219ENST00000487747 MRPS28Q9Y2Q9 187 aaKnown RBP3.84□□□□□ -1.79
SMC4-219ENST00000487747 PYGO1Q9Y3Y4 419 aa3.84□□□□□ -1.79
SMC4-219ENST00000487747 FAM237AA0A1B0GTK4 181 aa3.83□□□□□ -1.8
SMC4-219ENST00000487747 A0A1W2PPI3 338 aa3.83□□□□□ -1.8
SMC4-219ENST00000487747 M0QZ24 198 aa3.83□□□□□ -1.8
SMC4-219ENST00000487747 CAVIN2O95810 425 aa3.83□□□□□ -1.8
SMC4-219ENST00000487747 NR3C1P04150 777 aa3.83□□□□□ -1.8
SMC4-219ENST00000487747 IFIT1P09914 478 aaKnown RBP3.83□□□□□ -1.8
SMC4-219ENST00000487747 KIR2DS3Q14952 304 aa3.83□□□□□ -1.8
SMC4-219ENST00000487747 CXorf66Q5JRM2 361 aaPredicted RBP3.83□□□□□ -1.8
SMC4-219ENST00000487747 LCE3EQ5T5B0 92 aa3.83□□□□□ -1.8
SMC4-219ENST00000487747 NOL8Q76FK4 1167 aaKnown RBP3.83□□□□□ -1.8
SMC4-219ENST00000487747 CACNA2D4Q7Z3S7 1137 aa3.83□□□□□ -1.8
SMC4-219ENST00000487747 RPS6KC1Q96S38 1066 aa3.83□□□□□ -1.8
SMC4-219ENST00000487747 SMC6Q96SB8 1091 aa3.83□□□□□ -1.8
SMC4-219ENST00000487747 ERVMER34-1Q9H9K5 563 aa3.83□□□□□ -1.8
SMC4-219ENST00000487747 ADPRHL2Q9NX46 363 aa3.83□□□□□ -1.8
SMC4-219ENST00000487747 GGA3Q9NZ52 723 aa3.83□□□□□ -1.8
SMC4-219ENST00000487747 KCND2Q9NZV8 630 aa3.83□□□□□ -1.8
SMC4-219ENST00000487747 RASAL2Q9UJF2 1139 aa3.83□□□□□ -1.8
SMC4-219ENST00000487747 INTS6Q9UL03 887 aaKnown RBP3.83□□□□□ -1.8
SMC4-219ENST00000487747 PRAG1Q86YV5 1406 aa3.82□□□□□ -1.8
SMC4-219ENST00000487747 A0A0G2JLW4 131 aa3.82□□□□□ -1.8
SMC4-219ENST00000487747 A6NL46 340 aa3.82□□□□□ -1.8
SMC4-219ENST00000487747 PSMD14O00487 310 aa3.82□□□□□ -1.8
SMC4-219ENST00000487747 HS3ST1O14792 307 aa3.82□□□□□ -1.8
SMC4-219ENST00000487747 SLC22A2O15244 555 aa3.82□□□□□ -1.8
SMC4-219ENST00000487747 SORBS2O94875 1100 aaKnown RBP3.82□□□□□ -1.8
SMC4-219ENST00000487747 POLBP06746 335 aa3.82□□□□□ -1.8
SMC4-219ENST00000487747 SP100P23497 879 aaPredicted RBP3.82□□□□□ -1.8
SMC4-219ENST00000487747 PIP4K2AP48426 406 aaPredicted RBP3.82□□□□□ -1.8
SMC4-219ENST00000487747 TBX2Q13207 712 aaPredicted RBP3.82□□□□□ -1.8
SMC4-219ENST00000487747 ACVR2BQ13705 512 aa3.82□□□□□ -1.8
SMC4-219ENST00000487747 GRAMD1BQ3KR37 738 aa3.82□□□□□ -1.8
SMC4-219ENST00000487747 PAPD4Q6PIY7 484 aaKnown RBP3.82□□□□□ -1.8
SMC4-219ENST00000487747 PLEKHM3Q6ZWE6 761 aa3.82□□□□□ -1.8
SMC4-219ENST00000487747 STXBP4Q6ZWJ1 553 aa3.82□□□□□ -1.8
SMC4-219ENST00000487747 Q75L30 129 aa3.82□□□□□ -1.8
SMC4-219ENST00000487747 OXNAD1Q96HP4 312 aaPredicted RBP3.82□□□□□ -1.8
SMC4-219ENST00000487747 POM121L2Q96KW2 1035 aa3.82□□□□□ -1.8
SMC4-219ENST00000487747 LINC00479Q96M42 142 aa3.82□□□□□ -1.8
SMC4-219ENST00000487747 BRF2Q9HAW0 419 aa3.82□□□□□ -1.8
SMC4-219ENST00000487747 FGF22Q9HCT0 170 aa3.82□□□□□ -1.8
SMC4-219ENST00000487747 TMEM181Q9P2C4 612 aa3.82□□□□□ -1.8
SMC4-219ENST00000487747 DNAJB4Q9UDY4 337 aa3.82□□□□□ -1.8
SMC4-219ENST00000487747 SARDHQ9UL12 918 aa3.82□□□□□ -1.8
SMC4-219ENST00000487747 MKLN1Q9UL63 735 aa3.82□□□□□ -1.8
SMC4-219ENST00000487747 CAPN7Q9Y6W3 813 aa3.82□□□□□ -1.8
SMC4-219ENST00000487747 C1orf226A1L170 272 aa3.81□□□□□ -1.8
SMC4-219ENST00000487747 LRRC53A6NM62 1247 aa3.81□□□□□ -1.8
SMC4-219ENST00000487747 TNFSF14O43557 240 aa3.81□□□□□ -1.8
SMC4-219ENST00000487747 CEACAM1P13688 526 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms