RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 FAM53AQ6NSI3 398 aaPredicted RBP3.68□□□□□ -1.82
CCDC66-221ENST00000487739 CCDC13Q8IYE1 715 aa3.68□□□□□ -1.82
CCDC66-221ENST00000487739 SLC44A1Q8WWI5 657 aa3.68□□□□□ -1.82
CCDC66-221ENST00000487739 FCAMRQ8WWV6 532 aa3.68□□□□□ -1.82
CCDC66-221ENST00000487739 PHF21AQ96BD5 680 aa3.68□□□□□ -1.82
CCDC66-221ENST00000487739 ABHD8Q96I13 439 aa3.68□□□□□ -1.82
CCDC66-221ENST00000487739 APOPT1Q96IL0 206 aa3.68□□□□□ -1.82
CCDC66-221ENST00000487739 PYGO2Q9BRQ0 406 aa3.68□□□□□ -1.82
CCDC66-221ENST00000487739 HERPUD2Q9BSE4 406 aa3.68□□□□□ -1.82
CCDC66-221ENST00000487739 USP44Q9H0E7 712 aa3.68□□□□□ -1.82
CCDC66-221ENST00000487739 BRF2Q9HAW0 419 aa3.68□□□□□ -1.82
CCDC66-221ENST00000487739 ASAH2Q9NR71 780 aa3.68□□□□□ -1.82
CCDC66-221ENST00000487739 C2orf42Q9NWW7 574 aa3.68□□□□□ -1.82
CCDC66-221ENST00000487739 A0A1W2PPI3 338 aa3.67□□□□□ -1.82
CCDC66-221ENST00000487739 FAM90A26D6RGX4 464 aa3.67□□□□□ -1.82
CCDC66-221ENST00000487739 SNAP23O00161 211 aa3.67□□□□□ -1.82
CCDC66-221ENST00000487739 ANKRD28O15084 1053 aa3.67□□□□□ -1.82
CCDC66-221ENST00000487739 CLIC2O15247 247 aa3.67□□□□□ -1.82
CCDC66-221ENST00000487739 KCNN4O15554 427 aa3.67□□□□□ -1.82
CCDC66-221ENST00000487739 SEC31AO94979 1220 aaKnown RBP3.67□□□□□ -1.82
CCDC66-221ENST00000487739 HNRNPA1P09651 372 aaKnown RBP eCLIP3.67□□□□□ -1.82
CCDC66-221ENST00000487739 UBA1P22314 1058 aaKnown RBP3.67□□□□□ -1.82
CCDC66-221ENST00000487739 NR2F2P24468 414 aa3.67□□□□□ -1.82
CCDC66-221ENST00000487739 ABCD1P33897 745 aa3.67□□□□□ -1.82
CCDC66-221ENST00000487739 CPOXP36551 454 aa3.67□□□□□ -1.82
CCDC66-221ENST00000487739 APOBEC1P41238 236 aaKnown RBP3.67□□□□□ -1.82
CCDC66-221ENST00000487739 HALP42357 657 aa3.67□□□□□ -1.82
CCDC66-221ENST00000487739 VAMP2P63027 116 aa3.67□□□□□ -1.82
CCDC66-221ENST00000487739 NEXNQ0ZGT2 675 aa3.67□□□□□ -1.82
CCDC66-221ENST00000487739 GALNT2Q10471 571 aa3.67□□□□□ -1.82
CCDC66-221ENST00000487739 BIRC2Q13490 618 aa3.67□□□□□ -1.82
CCDC66-221ENST00000487739 ITGA9Q13797 1035 aa3.67□□□□□ -1.82
CCDC66-221ENST00000487739 KIR2DS3Q14952 304 aa3.67□□□□□ -1.82
CCDC66-221ENST00000487739 ALG11Q2TAA5 492 aa3.67□□□□□ -1.82
CCDC66-221ENST00000487739 PAPD4Q6PIY7 484 aaKnown RBP3.67□□□□□ -1.82
CCDC66-221ENST00000487739 PIWIL4Q7Z3Z4 852 aaKnown RBP3.67□□□□□ -1.82
CCDC66-221ENST00000487739 ART5Q96L15 291 aa3.67□□□□□ -1.82
CCDC66-221ENST00000487739 ADPRHL2Q9NX46 363 aa3.67□□□□□ -1.82
CCDC66-221ENST00000487739 ACAD8Q9UKU7 415 aa3.67□□□□□ -1.82
CCDC66-221ENST00000487739 JRKLQ9Y4A0 524 aa3.67□□□□□ -1.82
CCDC66-221ENST00000487739 A0A1W2PQM1 296 aa3.66□□□□□ -1.82
CCDC66-221ENST00000487739 M0QZ24 198 aa3.66□□□□□ -1.82
CCDC66-221ENST00000487739 BUD23O43709 281 aaKnown RBP3.66□□□□□ -1.82
CCDC66-221ENST00000487739 CRLF1O75462 422 aa3.66□□□□□ -1.82
CCDC66-221ENST00000487739 NR3C1P04150 777 aa3.66□□□□□ -1.82
CCDC66-221ENST00000487739 ZNF10P21506 573 aaPredicted RBP3.66□□□□□ -1.82
CCDC66-221ENST00000487739 MCCP23508 829 aa3.66□□□□□ -1.82
CCDC66-221ENST00000487739 NOVP48745 357 aa3.66□□□□□ -1.82
CCDC66-221ENST00000487739 CLK1P49759 484 aaKnown RBP3.66□□□□□ -1.82
CCDC66-221ENST00000487739 ZNF790Q6PG37 636 aa3.66□□□□□ -1.82
CCDC66-221ENST00000487739 RDM1Q8NG50 284 aa3.66□□□□□ -1.82
CCDC66-221ENST00000487739 IGSF8Q969P0 613 aa3.66□□□□□ -1.82
CCDC66-221ENST00000487739 MAELQ96JY0 434 aaKnown RBP3.66□□□□□ -1.82
CCDC66-221ENST00000487739 NEUROD6Q96NK8 337 aa3.66□□□□□ -1.82
CCDC66-221ENST00000487739 OPRPNQ99935 248 aaPredicted RBP3.66□□□□□ -1.82
CCDC66-221ENST00000487739 PRKRIP1Q9H875 184 aaPredicted RBP3.66□□□□□ -1.82
CCDC66-221ENST00000487739 KIF9Q9HAQ2 790 aa3.66□□□□□ -1.82
CCDC66-221ENST00000487739 SLC28A3Q9HAS3 691 aa3.66□□□□□ -1.82
CCDC66-221ENST00000487739 HAO1Q9UJM8 370 aa3.66□□□□□ -1.82
CCDC66-221ENST00000487739 SARDHQ9UL12 918 aa3.66□□□□□ -1.82
CCDC66-221ENST00000487739 TP53BP1Q12888 1972 aaPredicted RBP3.65□□□□□ -1.82
CCDC66-221ENST00000487739 ANKRD66B4E2M5 251 aa3.65□□□□□ -1.83
CCDC66-221ENST00000487739 ARHGEF9O43307 516 aa3.65□□□□□ -1.83
CCDC66-221ENST00000487739 PIP5K1CO60331 668 aa3.65□□□□□ -1.83
CCDC66-221ENST00000487739 ZNF182P17025 639 aaPredicted RBP3.65□□□□□ -1.83
CCDC66-221ENST00000487739 ZNF26P17031 533 aaPredicted RBP3.65□□□□□ -1.83
CCDC66-221ENST00000487739 UGT1A1P22309 533 aa3.65□□□□□ -1.83
CCDC66-221ENST00000487739 ELF1P32519 619 aa3.65□□□□□ -1.83
CCDC66-221ENST00000487739 KRT2P35908 639 aa3.65□□□□□ -1.83
CCDC66-221ENST00000487739 PAFAH1B1P43034 410 aa3.65□□□□□ -1.83
CCDC66-221ENST00000487739 CTCFP49711 727 aaPredicted RBP3.65□□□□□ -1.83
CCDC66-221ENST00000487739 TRPC3Q13507 836 aa3.65□□□□□ -1.83
CCDC66-221ENST00000487739 DCTN2Q13561 401 aaKnown RBP3.65□□□□□ -1.83
CCDC66-221ENST00000487739 BAK1Q16611 211 aa3.65□□□□□ -1.83
CCDC66-221ENST00000487739 ZFP69Q49AA0 526 aa3.65□□□□□ -1.83
CCDC66-221ENST00000487739 KRTCAP3Q53RY4 240 aa3.65□□□□□ -1.83
CCDC66-221ENST00000487739 ANO5Q75V66 913 aa3.65□□□□□ -1.83
CCDC66-221ENST00000487739 GSTA5Q7RTV2 222 aa3.65□□□□□ -1.83
CCDC66-221ENST00000487739 LONP2Q86WA8 852 aa3.65□□□□□ -1.83
CCDC66-221ENST00000487739 RBM15BQ8NDT2 890 aaKnown RBP3.65□□□□□ -1.83
CCDC66-221ENST00000487739 GTF3C6Q969F1 213 aa3.65□□□□□ -1.83
CCDC66-221ENST00000487739 GCC1Q96CN9 775 aa3.65□□□□□ -1.83
CCDC66-221ENST00000487739 RRNAD1Q96FB5 475 aaKnown RBP3.65□□□□□ -1.83
CCDC66-221ENST00000487739 PPP1R13BQ96KQ4 1090 aa3.65□□□□□ -1.83
CCDC66-221ENST00000487739 ATOH8Q96SQ7 321 aa3.65□□□□□ -1.83
CCDC66-221ENST00000487739 UBXN6Q9BZV1 441 aa3.65□□□□□ -1.83
CCDC66-221ENST00000487739 PDZD7Q9H5P4 517 aa3.65□□□□□ -1.83
CCDC66-221ENST00000487739 ERVMER34-1Q9H9K5 563 aa3.65□□□□□ -1.83
CCDC66-221ENST00000487739 ZBTB20Q9HC78 741 aaPredicted RBP3.65□□□□□ -1.83
CCDC66-221ENST00000487739 INTS10Q9NVR2 710 aaKnown RBP3.65□□□□□ -1.83
CCDC66-221ENST00000487739 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.65□□□□□ -1.83
CCDC66-221ENST00000487739 A0A1W2PP11 408 aa3.64□□□□□ -1.83
CCDC66-221ENST00000487739 NDUFAF8A1L188 74 aa3.64□□□□□ -1.83
CCDC66-221ENST00000487739 KRTAP16-1A8MUX0 517 aa3.64□□□□□ -1.83
CCDC66-221ENST00000487739 TMEM178BH3BS89 294 aa3.64□□□□□ -1.83
CCDC66-221ENST00000487739 CD48P09326 243 aa3.64□□□□□ -1.83
CCDC66-221ENST00000487739 HSD3B1P14060 373 aa3.64□□□□□ -1.83
CCDC66-221ENST00000487739 HOXC13P31276 330 aa3.64□□□□□ -1.83
CCDC66-221ENST00000487739 MBTD1Q05BQ5 628 aa3.64□□□□□ -1.83
CCDC66-221ENST00000487739 SPOCK1Q08629 439 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms