RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 DUS1LQ6P1R4 473 aaKnown RBP3.74□□□□□ -1.81
HMGB1P36-201ENST00000487709 WDR73Q6P4I2 378 aa3.74□□□□□ -1.81
HMGB1P36-201ENST00000487709 POC5Q8NA72 575 aa3.74□□□□□ -1.81
HMGB1P36-201ENST00000487709 APPL2Q8NEU8 664 aa3.74□□□□□ -1.81
HMGB1P36-201ENST00000487709 IGSF8Q969P0 613 aa3.74□□□□□ -1.81
HMGB1P36-201ENST00000487709 RTP4Q96DX8 246 aa3.74□□□□□ -1.81
HMGB1P36-201ENST00000487709 QRFPRQ96P65 431 aa3.74□□□□□ -1.81
HMGB1P36-201ENST00000487709 ZNF385AQ96PM9 386 aaKnown RBP3.74□□□□□ -1.81
HMGB1P36-201ENST00000487709 MRPL1Q9BYD6 325 aaKnown RBP3.74□□□□□ -1.81
HMGB1P36-201ENST00000487709 HRH4Q9H3N8 390 aa3.74□□□□□ -1.81
HMGB1P36-201ENST00000487709 EPB41L5Q9HCM4 733 aa3.74□□□□□ -1.81
HMGB1P36-201ENST00000487709 LTB4R2Q9NPC1 389 aa3.74□□□□□ -1.81
HMGB1P36-201ENST00000487709 SETD4Q9NVD3 440 aa3.74□□□□□ -1.81
HMGB1P36-201ENST00000487709 MCM9Q9NXL9 1143 aa3.74□□□□□ -1.81
HMGB1P36-201ENST00000487709 SUCLA2Q9P2R7 463 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P36-201ENST00000487709 SIX4Q9UIU6 781 aa3.74□□□□□ -1.81
HMGB1P36-201ENST00000487709 DBNLQ9UJU6 430 aaKnown RBP3.74□□□□□ -1.81
HMGB1P36-201ENST00000487709 RPS6KA6Q9UK32 745 aa3.74□□□□□ -1.81
HMGB1P36-201ENST00000487709 FBXL2Q9UKC9 423 aa3.74□□□□□ -1.81
HMGB1P36-201ENST00000487709 ICAM5Q9UMF0 924 aa3.74□□□□□ -1.81
HMGB1P36-201ENST00000487709 PPIEQ9UNP9 301 aaKnown RBP3.74□□□□□ -1.81
HMGB1P36-201ENST00000487709 EXO1Q9UQ84 846 aaKnown RBP3.74□□□□□ -1.81
HMGB1P36-201ENST00000487709 VDAC3Q9Y277 283 aa3.74□□□□□ -1.81
HMGB1P36-201ENST00000487709 RSF1Q96T23 1441 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P36-201ENST00000487709 IGLV5-37A0A075B6J1 123 aa3.73□□□□□ -1.81
HMGB1P36-201ENST00000487709 A0A1W2PQ09 198 aa3.73□□□□□ -1.81
HMGB1P36-201ENST00000487709 C1orf226A1L170 272 aa3.73□□□□□ -1.81
HMGB1P36-201ENST00000487709 BTBD18B2RXH4 712 aa3.73□□□□□ -1.81
HMGB1P36-201ENST00000487709 SOCS6O14544 535 aa3.73□□□□□ -1.81
HMGB1P36-201ENST00000487709 IPO8O15397 1037 aaKnown RBP3.73□□□□□ -1.81
HMGB1P36-201ENST00000487709 NDUFS7O75251 213 aa3.73□□□□□ -1.81
HMGB1P36-201ENST00000487709 ZNF432O94892 652 aa3.73□□□□□ -1.81
HMGB1P36-201ENST00000487709 PLGP00747 810 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P36-201ENST00000487709 ACAA1P09110 424 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P36-201ENST00000487709 PORP16435 677 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P36-201ENST00000487709 GABRB1P18505 474 aa3.73□□□□□ -1.81
HMGB1P36-201ENST00000487709 NNMTP40261 264 aa3.73□□□□□ -1.81
HMGB1P36-201ENST00000487709 USP8P40818 1118 aa3.73□□□□□ -1.81
HMGB1P36-201ENST00000487709 UBA7P41226 1012 aa3.73□□□□□ -1.81
HMGB1P36-201ENST00000487709 RFX5P48382 616 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P36-201ENST00000487709 ARSEP51690 589 aa3.73□□□□□ -1.81
HMGB1P36-201ENST00000487709 CLCN3P51790 818 aa3.73□□□□□ -1.81
HMGB1P36-201ENST00000487709 GAS1P54826 345 aa3.73□□□□□ -1.81
HMGB1P36-201ENST00000487709 HNRNPH2P55795 449 aaKnown RBP3.73□□□□□ -1.81
HMGB1P36-201ENST00000487709 PDE1BQ01064 536 aa3.73□□□□□ -1.81
HMGB1P36-201ENST00000487709 GRSF1Q12849 480 aaKnown RBP eCLIP3.73□□□□□ -1.81
HMGB1P36-201ENST00000487709 DHX34Q14147 1143 aaKnown RBP3.73□□□□□ -1.81
HMGB1P36-201ENST00000487709 SLC39A14Q15043 492 aa3.73□□□□□ -1.81
HMGB1P36-201ENST00000487709 TOMM20Q15388 145 aa3.73□□□□□ -1.81
HMGB1P36-201ENST00000487709 EFNB3Q15768 340 aa3.73□□□□□ -1.81
HMGB1P36-201ENST00000487709 ZDHHC20Q5W0Z9 365 aa3.73□□□□□ -1.81
HMGB1P36-201ENST00000487709 GPR139Q6DWJ6 353 aa3.73□□□□□ -1.81
HMGB1P36-201ENST00000487709 NADSYN1Q6IA69 706 aa3.73□□□□□ -1.81
HMGB1P36-201ENST00000487709 ANKRD54Q6NXT1 300 aa3.73□□□□□ -1.81
HMGB1P36-201ENST00000487709 SDCCAG8Q86SQ7 713 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P36-201ENST00000487709 THAP6Q8TBB0 222 aa3.73□□□□□ -1.81
HMGB1P36-201ENST00000487709 TRPC4APQ8TEL6 797 aa3.73□□□□□ -1.81
HMGB1P36-201ENST00000487709 SNRNP27Q8WVK2 155 aaKnown RBP3.73□□□□□ -1.81
HMGB1P36-201ENST00000487709 TMED6Q8WW62 240 aa3.73□□□□□ -1.81
HMGB1P36-201ENST00000487709 ADAMTS14Q8WXS8 1223 aa3.73□□□□□ -1.81
HMGB1P36-201ENST00000487709 TAAR8Q969N4 342 aa3.73□□□□□ -1.81
HMGB1P36-201ENST00000487709 C3orf30Q96M34 536 aa3.73□□□□□ -1.81
HMGB1P36-201ENST00000487709 OR2A14Q96R47 310 aa3.73□□□□□ -1.81
HMGB1P36-201ENST00000487709 FIZ1Q96SL8 496 aa3.73□□□□□ -1.81
HMGB1P36-201ENST00000487709 PIGMQ9H3S5 423 aa3.73□□□□□ -1.81
HMGB1P36-201ENST00000487709 PCDH9Q9HC56 1237 aa3.73□□□□□ -1.81
HMGB1P36-201ENST00000487709 SLC35C2Q9NQQ7 365 aa3.73□□□□□ -1.81
HMGB1P36-201ENST00000487709 GIMAP4Q9NUV9 329 aa3.73□□□□□ -1.81
HMGB1P36-201ENST00000487709 ARHGEF38Q9NXL2 777 aa3.73□□□□□ -1.81
HMGB1P36-201ENST00000487709 ZNF224Q9NZL3 707 aa3.73□□□□□ -1.81
HMGB1P36-201ENST00000487709 STK26Q9P289 416 aa3.73□□□□□ -1.81
HMGB1P36-201ENST00000487709 SLC9A2Q9UBY0 812 aa3.73□□□□□ -1.81
HMGB1P36-201ENST00000487709 ACSL5Q9ULC5 683 aa3.73□□□□□ -1.81
HMGB1P36-201ENST00000487709 KAT6BQ8WYB5 2073 aa3.73□□□□□ -1.81
HMGB1P36-201ENST00000487709 EVPLQ92817 2033 aa3.72□□□□□ -1.81
HMGB1P36-201ENST00000487709 DENND3A2RUS2 1198 aa3.72□□□□□ -1.81
HMGB1P36-201ENST00000487709 CPED1A4D0V7 1026 aa3.72□□□□□ -1.81
HMGB1P36-201ENST00000487709 AGAP14A8MT82 685 aa3.72□□□□□ -1.81
HMGB1P36-201ENST00000487709 J3KR12 359 aa3.72□□□□□ -1.81
HMGB1P36-201ENST00000487709 SMAD9O15198 467 aaKnown RBP3.72□□□□□ -1.81
HMGB1P36-201ENST00000487709 BUD23O43709 281 aaKnown RBP3.72□□□□□ -1.81
HMGB1P36-201ENST00000487709 MITFO75030 526 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P36-201ENST00000487709 OR2C1O95371 312 aa3.72□□□□□ -1.81
HMGB1P36-201ENST00000487709 GJA1P17302 382 aa3.72□□□□□ -1.81
HMGB1P36-201ENST00000487709 ACTN2P35609 894 aa3.72□□□□□ -1.81
HMGB1P36-201ENST00000487709 GARSP41250 739 aaKnown RBP3.72□□□□□ -1.81
HMGB1P36-201ENST00000487709 TMPOP42166 694 aaKnown RBP3.72□□□□□ -1.81
HMGB1P36-201ENST00000487709 MSH2P43246 934 aa3.72□□□□□ -1.81
HMGB1P36-201ENST00000487709 NRIP1P48552 1158 aa3.72□□□□□ -1.81
HMGB1P36-201ENST00000487709 STAT2P52630 851 aa3.72□□□□□ -1.81
HMGB1P36-201ENST00000487709 TERF1P54274 439 aa3.72□□□□□ -1.81
HMGB1P36-201ENST00000487709 TAS2R38P59533 333 aa3.72□□□□□ -1.81
HMGB1P36-201ENST00000487709 EEF1A1P68104 462 aaKnown RBP3.72□□□□□ -1.81
HMGB1P36-201ENST00000487709 MRPS5P82675 430 aaKnown RBP3.72□□□□□ -1.81
HMGB1P36-201ENST00000487709 DDR1Q08345 913 aa3.72□□□□□ -1.81
HMGB1P36-201ENST00000487709 MYBPHQ13203 477 aa3.72□□□□□ -1.81
HMGB1P36-201ENST00000487709 PRPF4BQ13523 1007 aaKnown RBP3.72□□□□□ -1.81
HMGB1P36-201ENST00000487709 OASLQ15646 514 aaKnown RBP3.72□□□□□ -1.81
HMGB1P36-201ENST00000487709 RARS2Q5T160 578 aaKnown RBP3.72□□□□□ -1.81
HMGB1P36-201ENST00000487709 EEF1A1P5Q5VTE0 462 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms