RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 UGT1A1P22309 533 aa9.37□□□□□ -0.91
SF3B1-211ENST00000487698 UGT1A4P22310 534 aa9.37□□□□□ -0.91
SF3B1-211ENST00000487698 ATP5F1P24539 256 aaPredicted RBP9.37□□□□□ -0.91
SF3B1-211ENST00000487698 UGT1A3P35503 534 aa9.37□□□□□ -0.91
SF3B1-211ENST00000487698 UGT1A5P35504 534 aa9.37□□□□□ -0.91
SF3B1-211ENST00000487698 PPARGP37231 505 aaPredicted RBP9.37□□□□□ -0.91
SF3B1-211ENST00000487698 IL12RB1P42701 662 aa9.37□□□□□ -0.91
SF3B1-211ENST00000487698 METAP1P53582 386 aa9.37□□□□□ -0.91
SF3B1-211ENST00000487698 ABCE1P61221 599 aaKnown RBP9.37□□□□□ -0.91
SF3B1-211ENST00000487698 ENPP2Q13822 863 aa9.37□□□□□ -0.91
SF3B1-211ENST00000487698 ARHGEF7Q14155 803 aa9.37□□□□□ -0.91
SF3B1-211ENST00000487698 PREPLQ4J6C6 727 aaPredicted RBP9.37□□□□□ -0.91
SF3B1-211ENST00000487698 EGFLAMQ63HQ2 1017 aa9.37□□□□□ -0.91
SF3B1-211ENST00000487698 PAQR3Q6TCH7 311 aa9.37□□□□□ -0.91
SF3B1-211ENST00000487698 TRPM8Q7Z2W7 1104 aa9.37□□□□□ -0.91
SF3B1-211ENST00000487698 HSD11B1LQ7Z5J1 315 aa9.37□□□□□ -0.91
SF3B1-211ENST00000487698 CRLF3Q8IUI8 442 aa9.37□□□□□ -0.91
SF3B1-211ENST00000487698 ARRDC3Q96B67 414 aa9.37□□□□□ -0.91
SF3B1-211ENST00000487698 FAM136AQ96C01 138 aa9.37□□□□□ -0.91
SF3B1-211ENST00000487698 SLC30A3Q99726 388 aa9.37□□□□□ -0.91
SF3B1-211ENST00000487698 BOCQ9BWV1 1114 aa9.37□□□□□ -0.91
SF3B1-211ENST00000487698 GATA5Q9BWX5 397 aaPredicted RBP9.37□□□□□ -0.91
SF3B1-211ENST00000487698 DERL2Q9GZP9 239 aa9.37□□□□□ -0.91
SF3B1-211ENST00000487698 SYTL2Q9HCH5 934 aa9.37□□□□□ -0.91
SF3B1-211ENST00000487698 ABCF3Q9NUQ8 709 aa9.37□□□□□ -0.91
SF3B1-211ENST00000487698 SMOXQ9NWM0 555 aa9.37□□□□□ -0.91
SF3B1-211ENST00000487698 PKD2L2Q9NZM6 624 aa9.37□□□□□ -0.91
SF3B1-211ENST00000487698 CRLS1Q9UJA2 301 aa9.37□□□□□ -0.91
SF3B1-211ENST00000487698 IGLV3-16A0A075B6K0 115 aa9.36□□□□□ -0.91
SF3B1-211ENST00000487698 A0A1W2PPC1 479 aa9.36□□□□□ -0.91
SF3B1-211ENST00000487698 A8MT66 165 aa9.36□□□□□ -0.91
SF3B1-211ENST00000487698 KPNA3O00505 521 aaPredicted RBP9.36□□□□□ -0.91
SF3B1-211ENST00000487698 APODP05090 189 aa9.36□□□□□ -0.91
SF3B1-211ENST00000487698 HNRNPLP14866 589 aaKnown RBP eCLIP9.36□□□□□ -0.91
SF3B1-211ENST00000487698 GM2AP17900 193 aa9.36□□□□□ -0.91
SF3B1-211ENST00000487698 KCNA5P22460 613 aa9.36□□□□□ -0.91
SF3B1-211ENST00000487698 KCNC1P48547 511 aa9.36□□□□□ -0.91
SF3B1-211ENST00000487698 CLCN7P51798 805 aa9.36□□□□□ -0.91
SF3B1-211ENST00000487698 DNAJB13P59910 316 aa9.36□□□□□ -0.91
SF3B1-211ENST00000487698 POM121L1PQ3SYA9 428 aa9.36□□□□□ -0.91
SF3B1-211ENST00000487698 ATP13A5Q4VNC0 1218 aa9.36□□□□□ -0.91
SF3B1-211ENST00000487698 TTC7BQ86TV6 843 aa9.36□□□□□ -0.91
SF3B1-211ENST00000487698 RHEBL1Q8TAI7 183 aa9.36□□□□□ -0.91
SF3B1-211ENST00000487698 PIP4K2CQ8TBX8 421 aa9.36□□□□□ -0.91
SF3B1-211ENST00000487698 SREK1Q8WXA9 508 aaKnown RBP9.36□□□□□ -0.91
SF3B1-211ENST00000487698 ACOX2Q99424 681 aa9.36□□□□□ -0.91
SF3B1-211ENST00000487698 TTC1Q99614 292 aa9.36□□□□□ -0.91
SF3B1-211ENST00000487698 CLPBQ9H078 707 aa9.36□□□□□ -0.91
SF3B1-211ENST00000487698 ALG9Q9H6U8 611 aa9.36□□□□□ -0.91
SF3B1-211ENST00000487698 FBRSL1Q9HCM7 1045 aaKnown RBP9.36□□□□□ -0.91
SF3B1-211ENST00000487698 CD207Q9UJ71 328 aa9.36□□□□□ -0.91
SF3B1-211ENST00000487698 TMPRSS11EQ9UL52 423 aa9.36□□□□□ -0.91
SF3B1-211ENST00000487698 PRSS21Q9Y6M0 314 aa9.36□□□□□ -0.91
SF3B1-211ENST00000487698 ATG2BQ96BY7 2078 aa9.36□□□□□ -0.91
SF3B1-211ENST00000487698 NEMP2A6NFY4 417 aa9.35□□□□□ -0.91
SF3B1-211ENST00000487698 SKIV2L2P42285 1042 aaKnown RBP9.35□□□□□ -0.91
SF3B1-211ENST00000487698 SOX9P48436 509 aa9.35□□□□□ -0.91
SF3B1-211ENST00000487698 ATP6V0D1P61421 351 aa9.35□□□□□ -0.91
SF3B1-211ENST00000487698 NFKB2Q00653 900 aa9.35□□□□□ -0.91
SF3B1-211ENST00000487698 CCDC15Q0P6D6 951 aa9.35□□□□□ -0.91
SF3B1-211ENST00000487698 OR4D1Q15615 310 aa9.35□□□□□ -0.91
SF3B1-211ENST00000487698 HSF5Q4G112 596 aaPredicted RBP9.35□□□□□ -0.91
SF3B1-211ENST00000487698 HENMT1Q5T8I9 393 aaKnown RBP9.35□□□□□ -0.91
SF3B1-211ENST00000487698 ERAP2Q6P179 960 aa9.35□□□□□ -0.91
SF3B1-211ENST00000487698 MACC1Q6ZN28 852 aa9.35□□□□□ -0.91
SF3B1-211ENST00000487698 TECPR1Q7Z6L1 1165 aa9.35□□□□□ -0.91
SF3B1-211ENST00000487698 SUGP1Q8IWZ8 645 aaKnown RBP9.35□□□□□ -0.91
SF3B1-211ENST00000487698 RAVER1Q8IY67 606 aaKnown RBP9.35□□□□□ -0.91
SF3B1-211ENST00000487698 NKAPQ8N5F7 415 aaKnown RBP9.35□□□□□ -0.91
SF3B1-211ENST00000487698 SIDT2Q8NBJ9 832 aaKnown RBP9.35□□□□□ -0.91
SF3B1-211ENST00000487698 PIWIL2Q8TC59 973 aaKnown RBP9.35□□□□□ -0.91
SF3B1-211ENST00000487698 EZH1Q92800 747 aaPredicted RBP9.35□□□□□ -0.91
SF3B1-211ENST00000487698 KIAA1191Q96A73 305 aa9.35□□□□□ -0.91
SF3B1-211ENST00000487698 ULK4Q96C45 1275 aa9.35□□□□□ -0.91
SF3B1-211ENST00000487698 SGF29Q96ES7 293 aa9.35□□□□□ -0.91
SF3B1-211ENST00000487698 ATOH8Q96SQ7 321 aa9.35□□□□□ -0.91
SF3B1-211ENST00000487698 SIKE1Q9BRV8 207 aa9.35□□□□□ -0.91
SF3B1-211ENST00000487698 TMEM120AQ9BXJ8 343 aa9.35□□□□□ -0.91
SF3B1-211ENST00000487698 DRC3Q9H069 523 aa9.35□□□□□ -0.91
SF3B1-211ENST00000487698 CDH19Q9H159 772 aa9.35□□□□□ -0.91
SF3B1-211ENST00000487698 KDM4CQ9H3R0 1056 aa9.35□□□□□ -0.91
SF3B1-211ENST00000487698 TFB2MQ9H5Q4 396 aaKnown RBP9.35□□□□□ -0.91
SF3B1-211ENST00000487698 PRSS16Q9NQE7 514 aa9.35□□□□□ -0.91
SF3B1-211ENST00000487698 ZDHHC3Q9NYG2 299 aa9.35□□□□□ -0.91
SF3B1-211ENST00000487698 KCNK4Q9NYG8 393 aa9.35□□□□□ -0.91
SF3B1-211ENST00000487698 TRMT6Q9UJA5 497 aaKnown RBP9.35□□□□□ -0.91
SF3B1-211ENST00000487698 GNPTGQ9UJJ9 305 aa9.35□□□□□ -0.91
SF3B1-211ENST00000487698 HAO1Q9UJM8 370 aa9.35□□□□□ -0.91
SF3B1-211ENST00000487698 DCTN4Q9UJW0 460 aa9.35□□□□□ -0.91
SF3B1-211ENST00000487698 IKZF3Q9UKT9 509 aa9.35□□□□□ -0.91
SF3B1-211ENST00000487698 DNAJC16Q9Y2G8 782 aa9.35□□□□□ -0.91
SF3B1-211ENST00000487698 A0A0G2JND7 137 aa9.35□□□□□ -0.91
SF3B1-211ENST00000487698 CCDC189A1A4V9 331 aa9.35□□□□□ -0.91
SF3B1-211ENST00000487698 RGSL1A5PLK6 1076 aa9.35□□□□□ -0.91
SF3B1-211ENST00000487698 GRXCR2A6NFK2 248 aa9.35□□□□□ -0.91
SF3B1-211ENST00000487698 IQCF5A8MTL0 148 aa9.35□□□□□ -0.91
SF3B1-211ENST00000487698 H0Y858 1186 aa9.35□□□□□ -0.91
SF3B1-211ENST00000487698 PSMD11O00231 422 aa9.35□□□□□ -0.91
SF3B1-211ENST00000487698 AREL1O15033 823 aa9.35□□□□□ -0.91
SF3B1-211ENST00000487698 IPO13O94829 963 aaKnown RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms