RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 BLKP51451 505 aa19.2■□□□□ 0.66
PCOLCE-208ENST00000487172 ATXN3P54252 364 aaPredicted RBP19.2■□□□□ 0.66
PCOLCE-208ENST00000487172 PRAMEP78395 509 aa19.2■□□□□ 0.66
PCOLCE-208ENST00000487172 LDLRAP1Q5SW96 308 aa19.2■□□□□ 0.66
PCOLCE-208ENST00000487172 KIAA0930Q6ICG6 404 aaPredicted RBP19.2■□□□□ 0.66
PCOLCE-208ENST00000487172 CENPUQ71F23 418 aa19.2■□□□□ 0.66
PCOLCE-208ENST00000487172 DDHD1Q8NEL9 900 aa19.2■□□□□ 0.66
PCOLCE-208ENST00000487172 OR4L1Q8NH43 312 aa19.2■□□□□ 0.66
PCOLCE-208ENST00000487172 FCRL3Q96P31 734 aaPredicted RBP19.2■□□□□ 0.66
PCOLCE-208ENST00000487172 GAREM1Q9H706 876 aa19.2■□□□□ 0.66
PCOLCE-208ENST00000487172 ZDHHC18Q9NUE0 388 aa19.2■□□□□ 0.66
PCOLCE-208ENST00000487172 DGKBQ9Y6T7 804 aa19.2■□□□□ 0.66
PCOLCE-208ENST00000487172 FAM169AQ9Y6X4 670 aa19.2■□□□□ 0.66
PCOLCE-208ENST00000487172 YKT6O15498 198 aa19.19■□□□□ 0.66
PCOLCE-208ENST00000487172 VEGFDO43915 354 aa19.19■□□□□ 0.66
PCOLCE-208ENST00000487172 GOT2P00505 430 aaKnown RBP19.19■□□□□ 0.66
PCOLCE-208ENST00000487172 POLBP06746 335 aa19.19■□□□□ 0.66
PCOLCE-208ENST00000487172 IVLP07476 585 aa19.19■□□□□ 0.66
PCOLCE-208ENST00000487172 ZNF883P0CG24 379 aa19.19■□□□□ 0.66
PCOLCE-208ENST00000487172 NME1P15531 152 aaKnown RBP19.19■□□□□ 0.66
PCOLCE-208ENST00000487172 PGAM1P18669 254 aa19.19■□□□□ 0.66
PCOLCE-208ENST00000487172 CA5AP35218 305 aa19.19■□□□□ 0.66
PCOLCE-208ENST00000487172 SRP54P61011 504 aaKnown RBP19.19■□□□□ 0.66
PCOLCE-208ENST00000487172 PPARDQ03181 441 aa19.19■□□□□ 0.66
PCOLCE-208ENST00000487172 ALG11Q2TAA5 492 aa19.19■□□□□ 0.66
PCOLCE-208ENST00000487172 ZRANB3Q5FWF4 1079 aa19.19■□□□□ 0.66
PCOLCE-208ENST00000487172 GPRC6AQ5T6X5 926 aa19.19■□□□□ 0.66
PCOLCE-208ENST00000487172 CES3Q6UWW8 571 aa19.19■□□□□ 0.66
PCOLCE-208ENST00000487172 IFT20Q8IY31 132 aa19.19■□□□□ 0.66
PCOLCE-208ENST00000487172 NXPE1Q8N323 547 aa19.19■□□□□ 0.66
PCOLCE-208ENST00000487172 MINDY1Q8N5J2 469 aa19.19■□□□□ 0.66
PCOLCE-208ENST00000487172 OR6P1Q8NGX9 317 aa19.19■□□□□ 0.66
PCOLCE-208ENST00000487172 ZNF669Q96BR6 464 aaPredicted RBP19.19■□□□□ 0.66
PCOLCE-208ENST00000487172 RMI1Q9H9A7 625 aa19.19■□□□□ 0.66
PCOLCE-208ENST00000487172 FGF22Q9HCT0 170 aa19.19■□□□□ 0.66
PCOLCE-208ENST00000487172 DNAAF2Q9NVR5 837 aaKnown RBP19.19■□□□□ 0.66
PCOLCE-208ENST00000487172 KLQ9UEF7 1012 aa19.19■□□□□ 0.66
PCOLCE-208ENST00000487172 CRLS1Q9UJA2 301 aa19.19■□□□□ 0.66
PCOLCE-208ENST00000487172 PNMA8BQ9ULN7 279 aaPredicted RBP19.19■□□□□ 0.66
PCOLCE-208ENST00000487172 OAS3Q9Y6K5 1087 aaKnown RBP19.19■□□□□ 0.66
PCOLCE-208ENST00000487172 MYO15AQ9UKN7 3530 aa19.19■□□□□ 0.66
PCOLCE-208ENST00000487172 LRP4O75096 1905 aa19.18■□□□□ 0.66
PCOLCE-208ENST00000487172 ZCWPW2A0A1B0GU75 182 aa19.18■□□□□ 0.66
PCOLCE-208ENST00000487172 PRSS38A1L453 326 aa19.18■□□□□ 0.66
PCOLCE-208ENST00000487172 CDX4O14627 284 aaPredicted RBP19.18■□□□□ 0.66
PCOLCE-208ENST00000487172 GPR39O43194 453 aa19.18■□□□□ 0.66
PCOLCE-208ENST00000487172 BANF1O75531 89 aa19.18■□□□□ 0.66
PCOLCE-208ENST00000487172 RASGRP1O95267 797 aa19.18■□□□□ 0.66
PCOLCE-208ENST00000487172 ASMTLO95671 621 aa19.18■□□□□ 0.66
PCOLCE-208ENST00000487172 TNFP01375 233 aa19.18■□□□□ 0.66
PCOLCE-208ENST00000487172 FUCA1P04066 466 aa19.18■□□□□ 0.66
PCOLCE-208ENST00000487172 ARNTP27540 789 aa19.18■□□□□ 0.66
PCOLCE-208ENST00000487172 ELK3P41970 407 aa19.18■□□□□ 0.66
PCOLCE-208ENST00000487172 ARCN1P48444 511 aaKnown RBP19.18■□□□□ 0.66
PCOLCE-208ENST00000487172 ARRB1P49407 418 aaPredicted RBP19.18■□□□□ 0.66
PCOLCE-208ENST00000487172 HK3P52790 923 aa19.18■□□□□ 0.66
PCOLCE-208ENST00000487172 HNRNPKP61978 463 aaKnown RBP eCLIP19.18■□□□□ 0.66
PCOLCE-208ENST00000487172 TMEM115Q12893 351 aaPredicted RBP19.18■□□□□ 0.66
PCOLCE-208ENST00000487172 PDIA2Q13087 525 aaKnown RBP19.18■□□□□ 0.66
PCOLCE-208ENST00000487172 CUL1Q13616 776 aa19.18■□□□□ 0.66
PCOLCE-208ENST00000487172 SHBQ15464 509 aa19.18■□□□□ 0.66
PCOLCE-208ENST00000487172 FASTKD1Q53R41 847 aaKnown RBP19.18■□□□□ 0.66
PCOLCE-208ENST00000487172 SPANXN3Q5MJ09 141 aa19.18■□□□□ 0.66
PCOLCE-208ENST00000487172 PRAMEF14Q5SWL7 426 aa19.18■□□□□ 0.66
PCOLCE-208ENST00000487172 CERS6Q6ZMG9 384 aa19.18■□□□□ 0.66
PCOLCE-208ENST00000487172 ADGRG6Q86SQ4 1221 aa19.18■□□□□ 0.66
PCOLCE-208ENST00000487172 TRIM74Q86UV6 250 aa19.18■□□□□ 0.66
PCOLCE-208ENST00000487172 IGDCC3Q8IVU1 814 aa19.18■□□□□ 0.66
PCOLCE-208ENST00000487172 HEXDCQ8WVB3 486 aa19.18■□□□□ 0.66
PCOLCE-208ENST00000487172 OR1E3Q8WZA6 343 aa19.18■□□□□ 0.66
PCOLCE-208ENST00000487172 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.18■□□□□ 0.66
PCOLCE-208ENST00000487172 TSACCQ96A04 125 aaPredicted RBP19.18■□□□□ 0.66
PCOLCE-208ENST00000487172 EDEM2Q9BV94 578 aa19.18■□□□□ 0.66
PCOLCE-208ENST00000487172 GTPBP2Q9BX10 602 aaKnown RBP19.18■□□□□ 0.66
PCOLCE-208ENST00000487172 FAM96AQ9H5X1 160 aa19.18■□□□□ 0.66
PCOLCE-208ENST00000487172 DNAJC28Q9NX36 388 aa19.18■□□□□ 0.66
PCOLCE-208ENST00000487172 ZDHHC3Q9NYG2 299 aa19.18■□□□□ 0.66
PCOLCE-208ENST00000487172 ATXN10Q9UBB4 475 aa19.18■□□□□ 0.66
PCOLCE-208ENST00000487172 KLF15Q9UIH9 416 aa19.18■□□□□ 0.66
PCOLCE-208ENST00000487172 TMEM98Q9Y2Y6 226 aa19.18■□□□□ 0.66
PCOLCE-208ENST00000487172 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.18■□□□□ 0.66
PCOLCE-208ENST00000487172 IGLV3-16A0A075B6K0 115 aa19.17■□□□□ 0.66
PCOLCE-208ENST00000487172 OR51F1A6NGY5 319 aa19.17■□□□□ 0.66
PCOLCE-208ENST00000487172 H3BM21 787 aa19.17■□□□□ 0.66
PCOLCE-208ENST00000487172 NUAK1O60285 661 aa19.17■□□□□ 0.66
PCOLCE-208ENST00000487172 DNAJC6O75061 913 aa19.17■□□□□ 0.66
PCOLCE-208ENST00000487172 VAPBO95292 243 aa19.17■□□□□ 0.66
PCOLCE-208ENST00000487172 RHOXF2BP0C7M4 288 aa19.17■□□□□ 0.66
PCOLCE-208ENST00000487172 JUNDP17535 347 aa19.17■□□□□ 0.66
PCOLCE-208ENST00000487172 ACRV1P26436 265 aa19.17■□□□□ 0.66
PCOLCE-208ENST00000487172 CDKN1CP49918 316 aaPredicted RBP19.17■□□□□ 0.66
PCOLCE-208ENST00000487172 ITIH4Q14624 930 aa19.17■□□□□ 0.66
PCOLCE-208ENST00000487172 AASDHQ4L235 1098 aaPredicted RBP19.17■□□□□ 0.66
PCOLCE-208ENST00000487172 LYPLAL1Q5VWZ2 237 aa19.17■□□□□ 0.66
PCOLCE-208ENST00000487172 PSAPL1Q6NUJ1 521 aa19.17■□□□□ 0.66
PCOLCE-208ENST00000487172 SERPINA9Q86WD7 417 aa19.17■□□□□ 0.66
PCOLCE-208ENST00000487172 PIANPQ8IYJ0 282 aa19.17■□□□□ 0.66
PCOLCE-208ENST00000487172 PHACTR4Q8IZ21 702 aa19.17■□□□□ 0.66
PCOLCE-208ENST00000487172 GDAP1Q8TB36 358 aa19.17■□□□□ 0.66
PCOLCE-208ENST00000487172 FAM122AQ96E09 287 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms