RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 GDF7Q7Z4P5 450 aa7.56□□□□□ -1.2
PDPN-205ENST00000487038 MCEMP1Q8IX19 187 aa7.56□□□□□ -1.2
PDPN-205ENST00000487038 TMEM102Q8N9M5 508 aaPredicted RBP7.56□□□□□ -1.2
PDPN-205ENST00000487038 SIDT2Q8NBJ9 832 aaKnown RBP7.56□□□□□ -1.2
PDPN-205ENST00000487038 FDCSPQ8NFU4 85 aa7.56□□□□□ -1.2
PDPN-205ENST00000487038 EXD1Q8NHP7 514 aa7.56□□□□□ -1.2
PDPN-205ENST00000487038 JOSD2Q8TAC2 188 aa7.56□□□□□ -1.2
PDPN-205ENST00000487038 FNIP1Q8TF40 1166 aa7.56□□□□□ -1.2
PDPN-205ENST00000487038 SNRNP40Q96DI7 357 aaKnown RBP7.56□□□□□ -1.2
PDPN-205ENST00000487038 ZDHHC12Q96GR4 267 aa7.56□□□□□ -1.2
PDPN-205ENST00000487038 CELF6Q96J87 481 aaKnown RBP7.56□□□□□ -1.2
PDPN-205ENST00000487038 EIF3CQ99613 913 aaKnown RBP7.56□□□□□ -1.2
PDPN-205ENST00000487038 C11orf70Q9BRQ4 267 aa7.56□□□□□ -1.2
PDPN-205ENST00000487038 MAGEB5Q9BZ81 275 aa7.56□□□□□ -1.2
PDPN-205ENST00000487038 ILKAPQ9H0C8 392 aaPredicted RBP7.56□□□□□ -1.2
PDPN-205ENST00000487038 AGPAT4Q9NRZ5 378 aa7.56□□□□□ -1.2
PDPN-205ENST00000487038 KIAA1468Q9P260 1216 aa7.56□□□□□ -1.2
PDPN-205ENST00000487038 C5AR2Q9P296 337 aa7.56□□□□□ -1.2
PDPN-205ENST00000487038 TBC1D29Q9UFV1 150 aa7.56□□□□□ -1.2
PDPN-205ENST00000487038 CD84Q9UIB8 345 aa7.56□□□□□ -1.2
PDPN-205ENST00000487038 AJAP1Q9UKB5 411 aaPredicted RBP7.56□□□□□ -1.2
PDPN-205ENST00000487038 DNPEPQ9ULA0 475 aa7.56□□□□□ -1.2
PDPN-205ENST00000487038 FZD10Q9ULW2 581 aa7.56□□□□□ -1.2
PDPN-205ENST00000487038 SNX7Q9UNH6 387 aa7.56□□□□□ -1.2
PDPN-205ENST00000487038 KCNK6Q9Y257 313 aa7.56□□□□□ -1.2
PDPN-205ENST00000487038 PCM1Q15154 2024 aa7.56□□□□□ -1.2
PDPN-205ENST00000487038 PRSS44E7EML9 344 aa7.55□□□□□ -1.2
PDPN-205ENST00000487038 DFFAO00273 331 aa7.55□□□□□ -1.2
PDPN-205ENST00000487038 EEF2KO00418 725 aaKnown RBP7.55□□□□□ -1.2
PDPN-205ENST00000487038 DAPK3O43293 454 aa7.55□□□□□ -1.2
PDPN-205ENST00000487038 CCP110O43303 1012 aa7.55□□□□□ -1.2
PDPN-205ENST00000487038 DNAJC6O75061 913 aa7.55□□□□□ -1.2
PDPN-205ENST00000487038 EML2O95834 649 aa7.55□□□□□ -1.2
PDPN-205ENST00000487038 SOD1P00441 154 aa7.55□□□□□ -1.2
PDPN-205ENST00000487038 ALPPP05187 535 aa7.55□□□□□ -1.2
PDPN-205ENST00000487038 MMEP08473 750 aa7.55□□□□□ -1.2
PDPN-205ENST00000487038 TYRP1P17643 537 aa7.55□□□□□ -1.2
PDPN-205ENST00000487038 MMP8P22894 467 aa7.55□□□□□ -1.2
PDPN-205ENST00000487038 NSFP46459 744 aaKnown RBP7.55□□□□□ -1.2
PDPN-205ENST00000487038 ARL4DP49703 201 aa7.55□□□□□ -1.2
PDPN-205ENST00000487038 GSCP56915 257 aaPredicted RBP7.55□□□□□ -1.2
PDPN-205ENST00000487038 ACY1Q03154 408 aa7.55□□□□□ -1.2
PDPN-205ENST00000487038 RALGPS1Q5JS13 557 aa7.55□□□□□ -1.2
PDPN-205ENST00000487038 ARMC12Q5T9G4 340 aa7.55□□□□□ -1.2
PDPN-205ENST00000487038 IZUMO3Q5VZ72 239 aa7.55□□□□□ -1.2
PDPN-205ENST00000487038 TMEM26Q6ZUK4 368 aa7.55□□□□□ -1.2
PDPN-205ENST00000487038 TECPR1Q7Z6L1 1165 aa7.55□□□□□ -1.2
PDPN-205ENST00000487038 NOP9Q86U38 636 aaKnown RBP7.55□□□□□ -1.2
PDPN-205ENST00000487038 TRIM74Q86UV6 250 aa7.55□□□□□ -1.2
PDPN-205ENST00000487038 NLRP8Q86W28 1048 aa7.55□□□□□ -1.2
PDPN-205ENST00000487038 RBM12BQ8IXT5 1001 aaKnown RBP7.55□□□□□ -1.2
PDPN-205ENST00000487038 RAVER1Q8IY67 606 aaKnown RBP7.55□□□□□ -1.2
PDPN-205ENST00000487038 ELOA2Q8IYF1 753 aaPredicted RBP7.55□□□□□ -1.2
PDPN-205ENST00000487038 RBMXL3Q8N7X1 1067 aaKnown RBP7.55□□□□□ -1.2
PDPN-205ENST00000487038 EPS8L1Q8TE68 723 aa7.55□□□□□ -1.2
PDPN-205ENST00000487038 NSMCE1Q8WV22 266 aa7.55□□□□□ -1.2
PDPN-205ENST00000487038 TM9SF4Q92544 642 aa7.55□□□□□ -1.2
PDPN-205ENST00000487038 SCRN2Q96FV2 425 aa7.55□□□□□ -1.2
PDPN-205ENST00000487038 SGSM3Q96HU1 749 aa7.55□□□□□ -1.2
PDPN-205ENST00000487038 COX14Q96I36 57 aa7.55□□□□□ -1.2
PDPN-205ENST00000487038 ZNF599Q96NL3 588 aa7.55□□□□□ -1.2
PDPN-205ENST00000487038 MCCC1Q96RQ3 725 aaPredicted RBP7.55□□□□□ -1.2
PDPN-205ENST00000487038 NUDCD1Q96RS6 583 aa7.55□□□□□ -1.2
PDPN-205ENST00000487038 SMAD5Q99717 465 aaKnown RBP7.55□□□□□ -1.2
PDPN-205ENST00000487038 NUDT9Q9BW91 350 aa7.55□□□□□ -1.2
PDPN-205ENST00000487038 UNKQ9C0B0 810 aaKnown RBP7.55□□□□□ -1.2
PDPN-205ENST00000487038 SLC39A8Q9C0K1 460 aa7.55□□□□□ -1.2
PDPN-205ENST00000487038 ABCG8Q9H221 673 aa7.55□□□□□ -1.2
PDPN-205ENST00000487038 OSGEPL1Q9H4B0 414 aa7.55□□□□□ -1.2
PDPN-205ENST00000487038 GDPD2Q9HCC8 539 aa7.55□□□□□ -1.2
PDPN-205ENST00000487038 SIX2Q9NPC8 291 aa7.55□□□□□ -1.2
PDPN-205ENST00000487038 WASH6PQ9NQA3 447 aa7.55□□□□□ -1.2
PDPN-205ENST00000487038 POT1Q9NUX5 634 aa7.55□□□□□ -1.2
PDPN-205ENST00000487038 ASF1BQ9NVP2 202 aa7.55□□□□□ -1.2
PDPN-205ENST00000487038 FARSAQ9Y285 508 aaKnown RBP7.55□□□□□ -1.2
PDPN-205ENST00000487038 B3GNT3Q9Y2A9 372 aa7.55□□□□□ -1.2
PDPN-205ENST00000487038 PCDHGC4Q9Y5F7 938 aa7.55□□□□□ -1.2
PDPN-205ENST00000487038 ZNF185O15231 689 aa7.54□□□□□ -1.2
PDPN-205ENST00000487038 KRT86O43790 486 aa7.54□□□□□ -1.2
PDPN-205ENST00000487038 IPO13O94829 963 aaKnown RBP7.54□□□□□ -1.2
PDPN-205ENST00000487038 CYP1A1P04798 512 aaPredicted RBP7.54□□□□□ -1.2
PDPN-205ENST00000487038 CALB1P05937 261 aa7.54□□□□□ -1.2
PDPN-205ENST00000487038 KLK3P07288 261 aaPredicted RBP7.54□□□□□ -1.2
PDPN-205ENST00000487038 PRF1P14222 555 aa7.54□□□□□ -1.2
PDPN-205ENST00000487038 NELFEP18615 380 aaKnown RBP7.54□□□□□ -1.2
PDPN-205ENST00000487038 XRCC1P18887 633 aaPredicted RBP7.54□□□□□ -1.2
PDPN-205ENST00000487038 ITGA3P26006 1051 aa7.54□□□□□ -1.2
PDPN-205ENST00000487038 PTGER4P35408 488 aa7.54□□□□□ -1.2
PDPN-205ENST00000487038 VAV2P52735 878 aa7.54□□□□□ -1.2
PDPN-205ENST00000487038 GSDMDP57764 484 aa7.54□□□□□ -1.2
PDPN-205ENST00000487038 UBE2IP63279 158 aaKnown RBP7.54□□□□□ -1.2
PDPN-205ENST00000487038 ZRSR2Q15696 482 aaKnown RBP7.54□□□□□ -1.2
PDPN-205ENST00000487038 MAN2A1Q16706 1144 aa7.54□□□□□ -1.2
PDPN-205ENST00000487038 KYNUQ16719 465 aa7.54□□□□□ -1.2
PDPN-205ENST00000487038 TPD52L1Q16890 204 aaPredicted RBP7.54□□□□□ -1.2
PDPN-205ENST00000487038 PPP1R15BQ5SWA1 713 aa7.54□□□□□ -1.2
PDPN-205ENST00000487038 VWA5B1Q5TIE3 1220 aa7.54□□□□□ -1.2
PDPN-205ENST00000487038 LRRC66Q68CR7 880 aa7.54□□□□□ -1.2
PDPN-205ENST00000487038 IRGCQ6NXR0 463 aa7.54□□□□□ -1.2
PDPN-205ENST00000487038 FAM199XQ6PEV8 388 aaPredicted RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms