RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 AHCYL2Q96HN2 611 aaKnown RBP24.3■■□□□ 1.48
LIME1-206ENST00000487026 ATXN10Q9UBB4 475 aa24.3■■□□□ 1.48
LIME1-206ENST00000487026 PPP1R12AO14974 1030 aaPredicted RBP24.29■■□□□ 1.48
LIME1-206ENST00000487026 GRID2O43424 1007 aa24.29■■□□□ 1.48
LIME1-206ENST00000487026 NUAK1O60285 661 aa24.29■■□□□ 1.48
LIME1-206ENST00000487026 MT-CYBP00156 380 aaPredicted RBP24.29■■□□□ 1.48
LIME1-206ENST00000487026 THRAP10827 490 aa24.29■■□□□ 1.48
LIME1-206ENST00000487026 ZNF8P17098 575 aaPredicted RBP24.29■■□□□ 1.48
LIME1-206ENST00000487026 COMTP21964 271 aa24.29■■□□□ 1.48
LIME1-206ENST00000487026 ARSDP51689 593 aa24.29■■□□□ 1.48
LIME1-206ENST00000487026 GPLD1P80108 840 aa24.29■■□□□ 1.48
LIME1-206ENST00000487026 HHEXQ03014 270 aa24.29■■□□□ 1.48
LIME1-206ENST00000487026 CDK18Q07002 472 aa24.29■■□□□ 1.48
LIME1-206ENST00000487026 TRA2AQ13595 282 aaKnown RBP eCLIP24.29■■□□□ 1.48
LIME1-206ENST00000487026 SNAP47Q5SQN1 464 aa24.29■■□□□ 1.48
LIME1-206ENST00000487026 TMEM71Q6P5X7 295 aa24.29■■□□□ 1.48
LIME1-206ENST00000487026 IYDQ6PHW0 289 aa24.29■■□□□ 1.48
LIME1-206ENST00000487026 AGBL5Q8NDL9 886 aa24.29■■□□□ 1.48
LIME1-206ENST00000487026 SGF29Q96ES7 293 aa24.29■■□□□ 1.48
LIME1-206ENST00000487026 TAAR9Q96RI9 348 aa24.29■■□□□ 1.48
LIME1-206ENST00000487026 OR2AG1Q9H205 316 aa24.29■■□□□ 1.48
LIME1-206ENST00000487026 GLOD4Q9HC38 313 aa24.29■■□□□ 1.48
LIME1-206ENST00000487026 OCIAD1Q9NX40 245 aa24.29■■□□□ 1.48
LIME1-206ENST00000487026 DDX56Q9NY93 547 aaKnown RBP24.29■■□□□ 1.48
LIME1-206ENST00000487026 UBP1Q9NZI7 540 aa24.29■■□□□ 1.48
LIME1-206ENST00000487026 A8MU76 341 aa24.28■■□□□ 1.48
LIME1-206ENST00000487026 SLC25A14O95258 325 aaPredicted RBP24.28■■□□□ 1.48
LIME1-206ENST00000487026 WT1P19544 449 aaPredicted RBP24.28■■□□□ 1.48
LIME1-206ENST00000487026 CSTF2P33240 577 aaKnown RBP eCLIP24.28■■□□□ 1.48
LIME1-206ENST00000487026 SLC1A1P43005 524 aa24.28■■□□□ 1.48
LIME1-206ENST00000487026 ART4Q93070 314 aa24.28■■□□□ 1.48
LIME1-206ENST00000487026 TADA1Q96BN2 335 aa24.28■■□□□ 1.48
LIME1-206ENST00000487026 GPR63Q9BZJ6 419 aa24.28■■□□□ 1.48
LIME1-206ENST00000487026 RMI1Q9H9A7 625 aa24.28■■□□□ 1.48
LIME1-206ENST00000487026 MAGEE1Q9HCI5 957 aa24.28■■□□□ 1.48
LIME1-206ENST00000487026 PRDM8Q9NQV8 689 aa24.28■■□□□ 1.48
LIME1-206ENST00000487026 ZNF711Q9Y462 761 aa24.28■■□□□ 1.48
LIME1-206ENST00000487026 AKR1B15C9JRZ8 316 aaPredicted RBP24.27■■□□□ 1.48
LIME1-206ENST00000487026 SPOPO43791 374 aa24.27■■□□□ 1.48
LIME1-206ENST00000487026 PMPCBO75439 489 aa24.27■■□□□ 1.48
LIME1-206ENST00000487026 CD82P27701 267 aa24.27■■□□□ 1.48
LIME1-206ENST00000487026 TEX44Q53QW1 395 aa24.27■■□□□ 1.48
LIME1-206ENST00000487026 ZNF569Q5MCW4 686 aa24.27■■□□□ 1.48
LIME1-206ENST00000487026 KAZNQ674X7 775 aa24.27■■□□□ 1.48
LIME1-206ENST00000487026 TMC3Q7Z5M5 1100 aa24.27■■□□□ 1.48
LIME1-206ENST00000487026 EXD3Q8N9H8 876 aa24.27■■□□□ 1.48
LIME1-206ENST00000487026 OR10G6Q8NH81 332 aa24.27■■□□□ 1.48
LIME1-206ENST00000487026 NCSTNQ92542 709 aa24.27■■□□□ 1.48
LIME1-206ENST00000487026 MED8Q96G25 268 aa24.27■■□□□ 1.48
LIME1-206ENST00000487026 DPYSL5Q9BPU6 564 aa24.27■■□□□ 1.48
LIME1-206ENST00000487026 B3GNT4Q9C0J1 378 aa24.27■■□□□ 1.48
LIME1-206ENST00000487026 CARD9Q9H257 536 aa24.27■■□□□ 1.48
LIME1-206ENST00000487026 GOLPH3Q9H4A6 298 aa24.27■■□□□ 1.48
LIME1-206ENST00000487026 SARS2Q9NP81 518 aaKnown RBP24.27■■□□□ 1.48
LIME1-206ENST00000487026 KLC4Q9NSK0 619 aa24.27■■□□□ 1.48
LIME1-206ENST00000487026 SLC39A1Q9NY26 324 aa24.27■■□□□ 1.48
LIME1-206ENST00000487026 SPO11Q9Y5K1 396 aa24.27■■□□□ 1.48
LIME1-206ENST00000487026 B3GALT1Q9Y5Z6 326 aa24.27■■□□□ 1.48
LIME1-206ENST00000487026 A6NCN8 305 aa24.26■■□□□ 1.47
LIME1-206ENST00000487026 EFCAB7A8K855 629 aa24.26■■□□□ 1.47
LIME1-206ENST00000487026 AURKAO14965 403 aa24.26■■□□□ 1.47
LIME1-206ENST00000487026 PECAM1P16284 738 aaPredicted RBP24.26■■□□□ 1.47
LIME1-206ENST00000487026 PTPN3P26045 913 aa24.26■■□□□ 1.47
LIME1-206ENST00000487026 CDKN2BP42772 138 aa24.26■■□□□ 1.47
LIME1-206ENST00000487026 MAPK9P45984 424 aa24.26■■□□□ 1.47
LIME1-206ENST00000487026 CYP4F2P78329 520 aa24.26■■□□□ 1.47
LIME1-206ENST00000487026 TBX2Q13207 712 aaPredicted RBP24.26■■□□□ 1.47
LIME1-206ENST00000487026 LINC00303Q3SY05 128 aa24.26■■□□□ 1.47
LIME1-206ENST00000487026 ADGRG6Q86SQ4 1221 aa24.26■■□□□ 1.47
LIME1-206ENST00000487026 FAM129CQ86XR2 697 aa24.26■■□□□ 1.47
LIME1-206ENST00000487026 CNGA4Q8IV77 575 aa24.26■■□□□ 1.47
LIME1-206ENST00000487026 EXTL1Q92935 676 aa24.26■■□□□ 1.47
LIME1-206ENST00000487026 TRIM39Q9HCM9 518 aa24.26■■□□□ 1.47
LIME1-206ENST00000487026 INTUQ9ULD6 942 aa24.26■■□□□ 1.47
LIME1-206ENST00000487026 PCDHGA4Q9Y5G9 962 aa24.26■■□□□ 1.47
LIME1-206ENST00000487026 SDK2Q58EX2 2172 aa24.25■■□□□ 1.47
LIME1-206ENST00000487026 COL6A6A6NMZ7 2263 aa24.25■■□□□ 1.47
LIME1-206ENST00000487026 A0A0A6YYK5 440 aaPredicted RBP24.25■■□□□ 1.47
LIME1-206ENST00000487026 STMND1H3BQB6 276 aa24.25■■□□□ 1.47
LIME1-206ENST00000487026 DUX1O43812 170 aa24.25■■□□□ 1.47
LIME1-206ENST00000487026 CST8O60676 142 aa24.25■■□□□ 1.47
LIME1-206ENST00000487026 F3P13726 295 aa24.25■■□□□ 1.47
LIME1-206ENST00000487026 BPIP17213 487 aa24.25■■□□□ 1.47
LIME1-206ENST00000487026 ADCY2Q08462 1091 aa24.25■■□□□ 1.47
LIME1-206ENST00000487026 PRKD1Q15139 912 aaPredicted RBP24.25■■□□□ 1.47
LIME1-206ENST00000487026 TCEAL1Q15170 157 aa24.25■■□□□ 1.47
LIME1-206ENST00000487026 PLA2G4EQ3MJ16 856 aa24.25■■□□□ 1.47
LIME1-206ENST00000487026 CRTC3Q6UUV7 619 aa24.25■■□□□ 1.47
LIME1-206ENST00000487026 SLC9B2Q86UD5 537 aa24.25■■□□□ 1.47
LIME1-206ENST00000487026 TRAM1L1Q8N609 369 aa24.25■■□□□ 1.47
LIME1-206ENST00000487026 TEKT5Q96M29 485 aa24.25■■□□□ 1.47
LIME1-206ENST00000487026 ZSCAN5AQ9BUG6 496 aa24.25■■□□□ 1.47
LIME1-206ENST00000487026 OSGEPL1Q9H4B0 414 aa24.25■■□□□ 1.47
LIME1-206ENST00000487026 BPIFA1Q9NP55 256 aa24.25■■□□□ 1.47
LIME1-206ENST00000487026 PDP2Q9P2J9 529 aa24.25■■□□□ 1.47
LIME1-206ENST00000487026 SLC23A2Q9UGH3 650 aa24.25■■□□□ 1.47
LIME1-206ENST00000487026 TFR2Q9UP52 801 aa24.25■■□□□ 1.47
LIME1-206ENST00000487026 PCDHGA3Q9Y5H0 932 aa24.25■■□□□ 1.47
LIME1-206ENST00000487026 ADGRG1Q9Y653 693 aa24.25■■□□□ 1.47
LIME1-206ENST00000487026 ALG6Q9Y672 507 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms