RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 CHST8Q9H2A9 424 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 DPH5Q9H2P9 285 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 MVB12BQ9H7P6 319 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 TRIM45Q9H8W5 580 aaPredicted RBP5.48□□□□□ -1.53
COPS3-209ENST00000486810 MARCH7Q9H992 704 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 ZNF287Q9HBT7 754 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 CPNE5Q9HCH3 593 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 DDX43Q9NXZ2 648 aaKnown RBP5.48□□□□□ -1.53
COPS3-209ENST00000486810 OR6C2Q9NZP2 312 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 HMG20BQ9P0W2 317 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 ENOPH1Q9UHY7 261 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 NUP50Q9UKX7 468 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 OGDHLQ9ULD0 1010 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 SLC12A4Q9UP95 1085 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 RPH3AQ9Y2J0 694 aaPredicted RBP5.48□□□□□ -1.53
COPS3-209ENST00000486810 ZNF175Q9Y473 711 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 FHOD3Q2V2M9 1422 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 SPATA31A6Q5VVP1 1343 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 A0A0U1RQJ8 604 aa5.47□□□□□ -1.53
COPS3-209ENST00000486810 A0A1B0GTQ1 180 aa5.47□□□□□ -1.53
COPS3-209ENST00000486810 A8MX80 341 aa5.47□□□□□ -1.53
COPS3-209ENST00000486810 H0YIV9 168 aa5.47□□□□□ -1.53
COPS3-209ENST00000486810 H7C4K7 107 aa5.47□□□□□ -1.53
COPS3-209ENST00000486810 LAD1O00515 517 aa5.47□□□□□ -1.53
COPS3-209ENST00000486810 TRAPPC3O43617 180 aa5.47□□□□□ -1.53
COPS3-209ENST00000486810 TIPRLO75663 272 aa5.47□□□□□ -1.53
COPS3-209ENST00000486810 TOM1L1O75674 476 aa5.47□□□□□ -1.53
COPS3-209ENST00000486810 RBBP9O75884 186 aa5.47□□□□□ -1.53
COPS3-209ENST00000486810 NXPH3O95157 252 aa5.47□□□□□ -1.53
COPS3-209ENST00000486810 TTLL1O95922 423 aa5.47□□□□□ -1.53
COPS3-209ENST00000486810 GLAP06280 429 aa5.47□□□□□ -1.53
COPS3-209ENST00000486810 TFPTP0C1Z6 253 aa5.47□□□□□ -1.53
COPS3-209ENST00000486810 EBLN1P0CF75 366 aa5.47□□□□□ -1.53
COPS3-209ENST00000486810 CCNA2P20248 432 aa5.47□□□□□ -1.53
COPS3-209ENST00000486810 SLC9A3P48764 834 aa5.47□□□□□ -1.53
COPS3-209ENST00000486810 STARP49675 285 aa5.47□□□□□ -1.53
COPS3-209ENST00000486810 EIF2B2P49770 351 aaKnown RBP5.47□□□□□ -1.53
COPS3-209ENST00000486810 AP1S2P56377 157 aa5.47□□□□□ -1.53
COPS3-209ENST00000486810 PRAMEP78395 509 aa5.47□□□□□ -1.53
COPS3-209ENST00000486810 KCNJ10P78508 379 aa5.47□□□□□ -1.53
COPS3-209ENST00000486810 GUCY2DQ02846 1103 aa5.47□□□□□ -1.53
COPS3-209ENST00000486810 COASYQ13057 564 aa5.47□□□□□ -1.53
COPS3-209ENST00000486810 TAF12Q16514 161 aa5.47□□□□□ -1.53
COPS3-209ENST00000486810 KRT24Q2M2I5 525 aa5.47□□□□□ -1.53
COPS3-209ENST00000486810 GTDC1Q4AE62 458 aa5.47□□□□□ -1.53
COPS3-209ENST00000486810 EFHC1Q5JVL4 640 aa5.47□□□□□ -1.53
COPS3-209ENST00000486810 TEDDM1Q5T9Z0 273 aa5.47□□□□□ -1.53
COPS3-209ENST00000486810 C6orf163Q5TEZ5 329 aa5.47□□□□□ -1.53
COPS3-209ENST00000486810 FCRL6Q6DN72 434 aa5.47□□□□□ -1.53
COPS3-209ENST00000486810 SHQ1Q6PI26 577 aaKnown RBP5.47□□□□□ -1.53
COPS3-209ENST00000486810 ZYG11AQ6WRX3 759 aa5.47□□□□□ -1.53
COPS3-209ENST00000486810 KRT74Q7RTS7 529 aa5.47□□□□□ -1.53
COPS3-209ENST00000486810 NUP54Q7Z3B4 507 aa5.47□□□□□ -1.53
COPS3-209ENST00000486810 AMIGO2Q86SJ2 522 aa5.47□□□□□ -1.53
COPS3-209ENST00000486810 CCDC25Q86WR0 208 aa5.47□□□□□ -1.53
COPS3-209ENST00000486810 RHPN2Q8IUC4 686 aa5.47□□□□□ -1.53
COPS3-209ENST00000486810 CCDC28AQ8IWP9 274 aa5.47□□□□□ -1.53
COPS3-209ENST00000486810 ELMOD2Q8IZ81 293 aa5.47□□□□□ -1.53
COPS3-209ENST00000486810 CCDC33Q8N5R6 958 aa5.47□□□□□ -1.53
COPS3-209ENST00000486810 ARFGAP2Q8N6H7 521 aa5.47□□□□□ -1.53
COPS3-209ENST00000486810 TERB1Q8NA31 727 aa5.47□□□□□ -1.53
COPS3-209ENST00000486810 PHKBQ93100 1093 aa5.47□□□□□ -1.53
COPS3-209ENST00000486810 LRRC59Q96AG4 307 aaKnown RBP5.47□□□□□ -1.53
COPS3-209ENST00000486810 SARAFQ96BY9 339 aa5.47□□□□□ -1.53
COPS3-209ENST00000486810 R3HDM4Q96D70 268 aa5.47□□□□□ -1.53
COPS3-209ENST00000486810 ZNF764Q96H86 408 aaPredicted RBP5.47□□□□□ -1.53
COPS3-209ENST00000486810 RADILQ96JH8 1075 aa5.47□□□□□ -1.53
COPS3-209ENST00000486810 STRBPQ96SI9 672 aaKnown RBP5.47□□□□□ -1.53
COPS3-209ENST00000486810 RIT2Q99578 217 aa5.47□□□□□ -1.53
COPS3-209ENST00000486810 BCL7BQ9BQE9 202 aa5.47□□□□□ -1.53
COPS3-209ENST00000486810 EIF2AK1Q9BQI3 630 aaKnown RBP5.47□□□□□ -1.53
COPS3-209ENST00000486810 FSD1Q9BTV5 496 aa5.47□□□□□ -1.53
COPS3-209ENST00000486810 STK33Q9BYT3 514 aa5.47□□□□□ -1.53
COPS3-209ENST00000486810 BTBD1Q9H0C5 482 aa5.47□□□□□ -1.53
COPS3-209ENST00000486810 CUEDC2Q9H467 287 aa5.47□□□□□ -1.53
COPS3-209ENST00000486810 GBA2Q9HCG7 927 aaPredicted RBP5.47□□□□□ -1.53
COPS3-209ENST00000486810 IL1RAPL2Q9NP60 686 aa5.47□□□□□ -1.53
COPS3-209ENST00000486810 DDX4Q9NQI0 724 aaKnown RBP5.47□□□□□ -1.53
COPS3-209ENST00000486810 SELENONQ9NZV5 590 aa5.47□□□□□ -1.53
COPS3-209ENST00000486810 UVRAGQ9P2Y5 699 aa5.47□□□□□ -1.53
COPS3-209ENST00000486810 RGS17Q9UGC6 210 aaPredicted RBP5.47□□□□□ -1.53
COPS3-209ENST00000486810 FBXO40Q9UH90 709 aa5.47□□□□□ -1.53
COPS3-209ENST00000486810 CDC23Q9UJX2 597 aa5.47□□□□□ -1.53
COPS3-209ENST00000486810 STX8Q9UNK0 236 aa5.47□□□□□ -1.53
COPS3-209ENST00000486810 CDY1Q9Y6F8 540 aa5.47□□□□□ -1.53
COPS3-209ENST00000486810 CSNK1G3Q9Y6M4 447 aa5.47□□□□□ -1.53
COPS3-209ENST00000486810 DISP1Q96F81 1524 aa5.47□□□□□ -1.53
COPS3-209ENST00000486810 KDM5BQ9UGL1 1544 aa5.47□□□□□ -1.53
COPS3-209ENST00000486810 BLMP54132 1417 aaPredicted RBP5.47□□□□□ -1.53
COPS3-209ENST00000486810 CASZ1Q86V15 1759 aa5.47□□□□□ -1.53
COPS3-209ENST00000486810 WDR19Q8NEZ3 1342 aa5.47□□□□□ -1.53
COPS3-209ENST00000486810 PCDH11XQ9BZA7 1347 aa5.47□□□□□ -1.53
COPS3-209ENST00000486810 PCDH11YQ9BZA8 1340 aa5.47□□□□□ -1.53
COPS3-209ENST00000486810 LOC390937A0A1W2PQ73 354 aa5.46□□□□□ -1.54
COPS3-209ENST00000486810 ARHGEF35A5YM69 484 aa5.46□□□□□ -1.54
COPS3-209ENST00000486810 FAM172BPA6NC97 362 aa5.46□□□□□ -1.54
COPS3-209ENST00000486810 GMNCA6NCL1 334 aa5.46□□□□□ -1.54
COPS3-209ENST00000486810 H7C0C1 242 aa5.46□□□□□ -1.54
COPS3-209ENST00000486810 PCDH17O14917 1159 aa5.46□□□□□ -1.54
COPS3-209ENST00000486810 ACOX3O15254 700 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms