RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 CELF5Q8N6W0 485 aaKnown RBP11.87□□□□□ -0.51
PKP4-213ENST00000486254 RIN3Q8TB24 985 aa11.87□□□□□ -0.51
PKP4-213ENST00000486254 ZNF707Q96C28 371 aaPredicted RBP11.87□□□□□ -0.51
PKP4-213ENST00000486254 ULK4Q96C45 1275 aa11.87□□□□□ -0.51
PKP4-213ENST00000486254 CLPBQ9H078 707 aa11.87□□□□□ -0.51
PKP4-213ENST00000486254 CYP4F12Q9HCS2 524 aa11.87□□□□□ -0.51
PKP4-213ENST00000486254 IL26Q9NPH9 171 aa11.87□□□□□ -0.51
PKP4-213ENST00000486254 RAD18Q9NS91 495 aa11.87□□□□□ -0.51
PKP4-213ENST00000486254 SMOXQ9NWM0 555 aa11.87□□□□□ -0.51
PKP4-213ENST00000486254 PLK2Q9NYY3 685 aa11.87□□□□□ -0.51
PKP4-213ENST00000486254 GTSE1Q9NYZ3 720 aa11.87□□□□□ -0.51
PKP4-213ENST00000486254 NUDT4Q9NZJ9 180 aa11.87□□□□□ -0.51
PKP4-213ENST00000486254 NOP53Q9NZM5 478 aaKnown RBP11.87□□□□□ -0.51
PKP4-213ENST00000486254 HECAQ9UBI9 543 aaPredicted RBP11.87□□□□□ -0.51
PKP4-213ENST00000486254 PRPF19Q9UMS4 504 aaKnown RBP11.87□□□□□ -0.51
PKP4-213ENST00000486254 FAM50BQ9Y247 325 aa11.87□□□□□ -0.51
PKP4-213ENST00000486254 TRAF6Q9Y4K3 522 aa11.87□□□□□ -0.51
PKP4-213ENST00000486254 MYOFQ9NZM1 2061 aa11.86□□□□□ -0.51
PKP4-213ENST00000486254 IGLV3-16A0A075B6K0 115 aa11.86□□□□□ -0.51
PKP4-213ENST00000486254 GLYATL1P3A0A0U1RQE8 302 aa11.86□□□□□ -0.51
PKP4-213ENST00000486254 E5RI56 91 aa11.86□□□□□ -0.51
PKP4-213ENST00000486254 CIB2O75838 187 aa11.86□□□□□ -0.51
PKP4-213ENST00000486254 SUPT7LO94864 414 aa11.86□□□□□ -0.51
PKP4-213ENST00000486254 MLYCDO95822 493 aa11.86□□□□□ -0.51
PKP4-213ENST00000486254 SRPRAP08240 638 aaKnown RBP11.86□□□□□ -0.51
PKP4-213ENST00000486254 ALPIP09923 528 aa11.86□□□□□ -0.51
PKP4-213ENST00000486254 PRSS56P0CW18 603 aa11.86□□□□□ -0.51
PKP4-213ENST00000486254 EPCAMP16422 314 aa11.86□□□□□ -0.51
PKP4-213ENST00000486254 BPIP17213 487 aa11.86□□□□□ -0.51
PKP4-213ENST00000486254 GM2AP17900 193 aa11.86□□□□□ -0.51
PKP4-213ENST00000486254 PIK3R1P27986 724 aa11.86□□□□□ -0.51
PKP4-213ENST00000486254 CCR10P46092 362 aa11.86□□□□□ -0.51
PKP4-213ENST00000486254 ACADVLP49748 655 aa11.86□□□□□ -0.51
PKP4-213ENST00000486254 CCNHP51946 323 aaPredicted RBP11.86□□□□□ -0.51
PKP4-213ENST00000486254 ACTR3P61158 418 aa11.86□□□□□ -0.51
PKP4-213ENST00000486254 SQLEQ14534 574 aa11.86□□□□□ -0.51
PKP4-213ENST00000486254 UGT3A2Q3SY77 523 aa11.86□□□□□ -0.51
PKP4-213ENST00000486254 CDKL4Q5MAI5 379 aa11.86□□□□□ -0.51
PKP4-213ENST00000486254 ANKS6Q68DC2 871 aa11.86□□□□□ -0.51
PKP4-213ENST00000486254 PGM2L1Q6PCE3 622 aa11.86□□□□□ -0.51
PKP4-213ENST00000486254 TTC23LQ6PF05 361 aa11.86□□□□□ -0.51
PKP4-213ENST00000486254 ADIPOR2Q86V24 386 aa11.86□□□□□ -0.51
PKP4-213ENST00000486254 SERPINA9Q86WD7 417 aa11.86□□□□□ -0.51
PKP4-213ENST00000486254 NXPE1Q8N323 547 aa11.86□□□□□ -0.51
PKP4-213ENST00000486254 GIMAP7Q8NHV1 300 aa11.86□□□□□ -0.51
PKP4-213ENST00000486254 ZNF483Q8TF39 744 aaPredicted RBP11.86□□□□□ -0.51
PKP4-213ENST00000486254 BHMTQ93088 406 aa11.86□□□□□ -0.51
PKP4-213ENST00000486254 PHF21BQ96EK2 531 aa11.86□□□□□ -0.51
PKP4-213ENST00000486254 SMIM14Q96QK8 99 aa11.86□□□□□ -0.51
PKP4-213ENST00000486254 C17orf80Q9BSJ5 609 aa11.86□□□□□ -0.51
PKP4-213ENST00000486254 OSBPL1AQ9BXW6 950 aa11.86□□□□□ -0.51
PKP4-213ENST00000486254 LMAN2LQ9H0V9 348 aa11.86□□□□□ -0.51
PKP4-213ENST00000486254 WDR55Q9H6Y2 383 aaPredicted RBP11.86□□□□□ -0.51
PKP4-213ENST00000486254 PFDN4Q9NQP4 134 aa11.86□□□□□ -0.51
PKP4-213ENST00000486254 TMEM45AQ9NWC5 275 aa11.86□□□□□ -0.51
PKP4-213ENST00000486254 DKK3Q9UBP4 350 aa11.86□□□□□ -0.51
PKP4-213ENST00000486254 RNF112Q9ULX5 631 aa11.86□□□□□ -0.51
PKP4-213ENST00000486254 SLC27A6Q9Y2P4 619 aa11.86□□□□□ -0.51
PKP4-213ENST00000486254 NEDD8-MDP1E9PL57 170 aa11.85□□□□□ -0.51
PKP4-213ENST00000486254 UBXN8O00124 270 aa11.85□□□□□ -0.51
PKP4-213ENST00000486254 OR1I1O60431 355 aa11.85□□□□□ -0.51
PKP4-213ENST00000486254 NIPSNAP2O75323 286 aa11.85□□□□□ -0.51
PKP4-213ENST00000486254 ECI2O75521 394 aa11.85□□□□□ -0.51
PKP4-213ENST00000486254 CDK14O94921 469 aa11.85□□□□□ -0.51
PKP4-213ENST00000486254 CBSLP0DN79 551 aa11.85□□□□□ -0.51
PKP4-213ENST00000486254 GFAPP14136 432 aa11.85□□□□□ -0.51
PKP4-213ENST00000486254 HNRNPLP14866 589 aaKnown RBP eCLIP11.85□□□□□ -0.51
PKP4-213ENST00000486254 CTPS1P17812 591 aa11.85□□□□□ -0.51
PKP4-213ENST00000486254 CBSP35520 551 aa11.85□□□□□ -0.51
PKP4-213ENST00000486254 RGS4P49798 205 aa11.85□□□□□ -0.51
PKP4-213ENST00000486254 CDKN1CP49918 316 aaPredicted RBP11.85□□□□□ -0.51
PKP4-213ENST00000486254 ERVK-21P61565 698 aa11.85□□□□□ -0.51
PKP4-213ENST00000486254 TSNQ15631 228 aaKnown RBP11.85□□□□□ -0.51
PKP4-213ENST00000486254 PDCD2Q16342 344 aaPredicted RBP11.85□□□□□ -0.51
PKP4-213ENST00000486254 PREPLQ4J6C6 727 aaPredicted RBP11.85□□□□□ -0.51
PKP4-213ENST00000486254 LY6G5CQ5SRR4 150 aa11.85□□□□□ -0.51
PKP4-213ENST00000486254 KANK2Q63ZY3 851 aa11.85□□□□□ -0.51
PKP4-213ENST00000486254 ASTLQ6HA08 431 aaPredicted RBP11.85□□□□□ -0.51
PKP4-213ENST00000486254 C16orf89Q6UX73 402 aa11.85□□□□□ -0.51
PKP4-213ENST00000486254 TAS2R42Q7RTR8 314 aa11.85□□□□□ -0.51
PKP4-213ENST00000486254 ZSWIM9Q86XI8 627 aa11.85□□□□□ -0.51
PKP4-213ENST00000486254 ADGRG2Q8IZP9 1017 aa11.85□□□□□ -0.51
PKP4-213ENST00000486254 PNPLA1Q8N8W4 532 aa11.85□□□□□ -0.51
PKP4-213ENST00000486254 MICAL1Q8TDZ2 1067 aa11.85□□□□□ -0.51
PKP4-213ENST00000486254 JADE3Q92613 823 aa11.85□□□□□ -0.51
PKP4-213ENST00000486254 TACO1Q9BSH4 297 aaKnown RBP11.85□□□□□ -0.51
PKP4-213ENST00000486254 UNKQ9C0B0 810 aaKnown RBP11.85□□□□□ -0.51
PKP4-213ENST00000486254 SMG9Q9H0W8 520 aaKnown RBP11.85□□□□□ -0.51
PKP4-213ENST00000486254 ASB8Q9H765 288 aa11.85□□□□□ -0.51
PKP4-213ENST00000486254 BPIFA1Q9NP55 256 aa11.85□□□□□ -0.51
PKP4-213ENST00000486254 OBP2AQ9NY56 170 aa11.85□□□□□ -0.51
PKP4-213ENST00000486254 UTP6Q9NYH9 597 aaKnown RBP11.85□□□□□ -0.51
PKP4-213ENST00000486254 SLC8A2Q9UPR5 921 aa11.85□□□□□ -0.51
PKP4-213ENST00000486254 TNPO3Q9Y5L0 923 aaKnown RBP11.85□□□□□ -0.51
PKP4-213ENST00000486254 PIKFYVEQ9Y2I7 2098 aa11.85□□□□□ -0.51
PKP4-213ENST00000486254 PLXNB3Q9ULL4 1909 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 A0A088AWK7 358 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 NPIPB15A6NHN6 443 aaPredicted RBP11.84□□□□□ -0.51
PKP4-213ENST00000486254 SUPT3HB4E1H0 165 aa11.84□□□□□ -0.51
PKP4-213ENST00000486254 BTN3A1O00481 513 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms