RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 SFTPA2Q8IWL1 248 aa9.95□□□□□ -0.82
CPSF4-213ENST00000484112 FAM46DQ8NEK8 389 aa9.95□□□□□ -0.82
CPSF4-213ENST00000484112 PDXPQ96GD0 296 aa9.95□□□□□ -0.82
CPSF4-213ENST00000484112 COQ10AQ96MF6 247 aa9.95□□□□□ -0.82
CPSF4-213ENST00000484112 WDR92Q96MX6 357 aa9.95□□□□□ -0.82
CPSF4-213ENST00000484112 MLPHQ9BV36 600 aaPredicted RBP9.95□□□□□ -0.82
CPSF4-213ENST00000484112 DPEP2Q9H4A9 486 aa9.95□□□□□ -0.82
CPSF4-213ENST00000484112 TRABDQ9H4I3 376 aa9.95□□□□□ -0.82
CPSF4-213ENST00000484112 MAGEE1Q9HCI5 957 aa9.95□□□□□ -0.82
CPSF4-213ENST00000484112 HOMER3Q9NSC5 361 aa9.95□□□□□ -0.82
CPSF4-213ENST00000484112 KLHL8Q9P2G9 620 aaPredicted RBP9.95□□□□□ -0.82
CPSF4-213ENST00000484112 LRIT1Q9P2V4 623 aa9.95□□□□□ -0.82
CPSF4-213ENST00000484112 MOSPD1Q9UJG1 213 aa9.95□□□□□ -0.82
CPSF4-213ENST00000484112 ACSL6Q9UKU0 697 aa9.95□□□□□ -0.82
CPSF4-213ENST00000484112 PACSIN2Q9UNF0 486 aaPredicted RBP9.95□□□□□ -0.82
CPSF4-213ENST00000484112 AAR2Q9Y312 384 aaKnown RBP9.95□□□□□ -0.82
CPSF4-213ENST00000484112 JRKLQ9Y4A0 524 aa9.95□□□□□ -0.82
CPSF4-213ENST00000484112 RNF215Q9Y6U7 377 aa9.95□□□□□ -0.82
CPSF4-213ENST00000484112 CFAP46Q8IYW2 2715 aa9.94□□□□□ -0.82
CPSF4-213ENST00000484112 LOC285095A0A1B0GVY8 99 aa9.94□□□□□ -0.82
CPSF4-213ENST00000484112 GOLGA6CA6NDK9 693 aa9.94□□□□□ -0.82
CPSF4-213ENST00000484112 GOLGA6BA6NDN3 693 aa9.94□□□□□ -0.82
CPSF4-213ENST00000484112 C5orf60A6NFR6 353 aa9.94□□□□□ -0.82
CPSF4-213ENST00000484112 NPIPB15A6NHN6 443 aaPredicted RBP9.94□□□□□ -0.82
CPSF4-213ENST00000484112 B4DGG1 531 aa9.94□□□□□ -0.82
CPSF4-213ENST00000484112 C9orf172C9J069 976 aa9.94□□□□□ -0.82
CPSF4-213ENST00000484112 TNFRSF10CO14798 259 aa9.94□□□□□ -0.82
CPSF4-213ENST00000484112 NDST3O95803 873 aa9.94□□□□□ -0.82
CPSF4-213ENST00000484112 PRKCGP05129 697 aa9.94□□□□□ -0.82
CPSF4-213ENST00000484112 GOLGA6DP0CG33 693 aa9.94□□□□□ -0.82
CPSF4-213ENST00000484112 GLB1P16278 677 aa9.94□□□□□ -0.82
CPSF4-213ENST00000484112 HLA-DPA1P20036 260 aa9.94□□□□□ -0.82
CPSF4-213ENST00000484112 RBL1P28749 1068 aa9.94□□□□□ -0.82
CPSF4-213ENST00000484112 GEMP55040 296 aa9.94□□□□□ -0.82
CPSF4-213ENST00000484112 KIAA1024LP59773 190 aa9.94□□□□□ -0.82
CPSF4-213ENST00000484112 TLE1Q04724 770 aa9.94□□□□□ -0.82
CPSF4-213ENST00000484112 ZFP36L1Q07352 338 aaKnown RBP9.94□□□□□ -0.82
CPSF4-213ENST00000484112 PRPSAP1Q14558 356 aa9.94□□□□□ -0.82
CPSF4-213ENST00000484112 CLCA4Q14CN2 919 aa9.94□□□□□ -0.82
CPSF4-213ENST00000484112 ACOX1Q15067 660 aa9.94□□□□□ -0.82
CPSF4-213ENST00000484112 CNGA3Q16281 694 aa9.94□□□□□ -0.82
CPSF4-213ENST00000484112 AMZ1Q400G9 498 aa9.94□□□□□ -0.82
CPSF4-213ENST00000484112 TMEM164Q5U3C3 297 aa9.94□□□□□ -0.82
CPSF4-213ENST00000484112 ZDHHC20Q5W0Z9 365 aa9.94□□□□□ -0.82
CPSF4-213ENST00000484112 DRICH1Q6PGQ1 229 aaPredicted RBP9.94□□□□□ -0.82
CPSF4-213ENST00000484112 DARS2Q6PI48 645 aaKnown RBP9.94□□□□□ -0.82
CPSF4-213ENST00000484112 SLC13A5Q86YT5 568 aaPredicted RBP9.94□□□□□ -0.82
CPSF4-213ENST00000484112 ZNF567Q8N184 647 aa9.94□□□□□ -0.82
CPSF4-213ENST00000484112 GPR156Q8NFN8 814 aa9.94□□□□□ -0.82
CPSF4-213ENST00000484112 SLC35B2Q8TB61 432 aa9.94□□□□□ -0.82
CPSF4-213ENST00000484112 CCHCR1Q8TD31 782 aa9.94□□□□□ -0.82
CPSF4-213ENST00000484112 TMEM159Q96B96 161 aa9.94□□□□□ -0.82
CPSF4-213ENST00000484112 NUS1Q96E22 293 aa9.94□□□□□ -0.82
CPSF4-213ENST00000484112 DTD2Q96FN9 168 aa9.94□□□□□ -0.82
CPSF4-213ENST00000484112 TRIB3Q96RU7 358 aa9.94□□□□□ -0.82
CPSF4-213ENST00000484112 RBM15Q96T37 977 aaKnown RBP eCLIP9.94□□□□□ -0.82
CPSF4-213ENST00000484112 C19orf43Q9BQ61 176 aa9.94□□□□□ -0.82
CPSF4-213ENST00000484112 HERPUD2Q9BSE4 406 aa9.94□□□□□ -0.82
CPSF4-213ENST00000484112 SLC25A18Q9H1K4 315 aa9.94□□□□□ -0.82
CPSF4-213ENST00000484112 GBA3Q9H227 469 aa9.94□□□□□ -0.82
CPSF4-213ENST00000484112 SEMA6CQ9H3T2 930 aa9.94□□□□□ -0.82
CPSF4-213ENST00000484112 SUDS3Q9H7L9 328 aaPredicted RBP9.94□□□□□ -0.82
CPSF4-213ENST00000484112 MRPL40Q9NQ50 206 aaKnown RBP9.94□□□□□ -0.82
CPSF4-213ENST00000484112 GOLGA6AQ9NYA3 693 aa9.94□□□□□ -0.82
CPSF4-213ENST00000484112 HACD3Q9P035 362 aa9.94□□□□□ -0.82
CPSF4-213ENST00000484112 NFKBIL1Q9UBC1 381 aaPredicted RBP9.94□□□□□ -0.82
CPSF4-213ENST00000484112 FEZ2Q9UHY8 353 aaPredicted RBP9.94□□□□□ -0.82
CPSF4-213ENST00000484112 APPL1Q9UKG1 709 aa9.94□□□□□ -0.82
CPSF4-213ENST00000484112 CHKBQ9Y259 395 aa9.94□□□□□ -0.82
CPSF4-213ENST00000484112 TENM4Q6N022 2769 aa9.94□□□□□ -0.82
CPSF4-213ENST00000484112 CACNB4O00305 520 aaPredicted RBP9.93□□□□□ -0.82
CPSF4-213ENST00000484112 KCNN4O15554 427 aa9.93□□□□□ -0.82
CPSF4-213ENST00000484112 CCL4P13236 92 aa9.93□□□□□ -0.82
CPSF4-213ENST00000484112 GM2AP17900 193 aa9.93□□□□□ -0.82
CPSF4-213ENST00000484112 NFKB1P19838 968 aa9.93□□□□□ -0.82
CPSF4-213ENST00000484112 LHCGRP22888 699 aa9.93□□□□□ -0.82
CPSF4-213ENST00000484112 CD68P34810 354 aaPredicted RBP9.93□□□□□ -0.82
CPSF4-213ENST00000484112 STC1P52823 247 aa9.93□□□□□ -0.82
CPSF4-213ENST00000484112 PTSQ03393 145 aa9.93□□□□□ -0.82
CPSF4-213ENST00000484112 IHHQ14623 411 aa9.93□□□□□ -0.82
CPSF4-213ENST00000484112 LLGL1Q15334 1064 aa9.93□□□□□ -0.82
CPSF4-213ENST00000484112 QPCTQ16769 361 aa9.93□□□□□ -0.82
CPSF4-213ENST00000484112 P3H1Q32P28 736 aa9.93□□□□□ -0.82
CPSF4-213ENST00000484112 MAP9Q49MG5 647 aa9.93□□□□□ -0.82
CPSF4-213ENST00000484112 C14orf28Q4W4Y0 310 aa9.93□□□□□ -0.82
CPSF4-213ENST00000484112 ANKRD20A2Q5SQ80 823 aa9.93□□□□□ -0.82
CPSF4-213ENST00000484112 CERCAMQ5T4B2 595 aa9.93□□□□□ -0.82
CPSF4-213ENST00000484112 ANKRD20A1Q5TYW2 823 aa9.93□□□□□ -0.82
CPSF4-213ENST00000484112 ANKRD20A3Q5VUR7 823 aa9.93□□□□□ -0.82
CPSF4-213ENST00000484112 LRRC66Q68CR7 880 aa9.93□□□□□ -0.82
CPSF4-213ENST00000484112 PNCKQ6P2M8 343 aa9.93□□□□□ -0.82
CPSF4-213ENST00000484112 C4orf22Q6V702 233 aa9.93□□□□□ -0.82
CPSF4-213ENST00000484112 TMPRSS9Q7Z410 1059 aa9.93□□□□□ -0.82
CPSF4-213ENST00000484112 SPRED1Q7Z699 444 aa9.93□□□□□ -0.82
CPSF4-213ENST00000484112 TECPR1Q7Z6L1 1165 aa9.93□□□□□ -0.82
CPSF4-213ENST00000484112 KLHDC8BQ8IXV7 354 aa9.93□□□□□ -0.82
CPSF4-213ENST00000484112 PLA2G15Q8NCC3 412 aa9.93□□□□□ -0.82
CPSF4-213ENST00000484112 LPCAT1Q8NF37 534 aa9.93□□□□□ -0.82
CPSF4-213ENST00000484112 OR56A4Q8NGH8 313 aa9.93□□□□□ -0.82
CPSF4-213ENST00000484112 CCL4L1Q8NHW4 92 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms