RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 RASGEF1CQ8N431 466 aa5.64□□□□□ -1.51
SF3B1-210ENST00000482158 SMRP1Q8NCR6 262 aa5.64□□□□□ -1.51
SF3B1-210ENST00000482158 OR5R1Q8NH85 324 aa5.64□□□□□ -1.51
SF3B1-210ENST00000482158 DUSP19Q8WTR2 217 aa5.64□□□□□ -1.51
SF3B1-210ENST00000482158 NEUROG1Q92886 237 aa5.64□□□□□ -1.51
SF3B1-210ENST00000482158 ERP27Q96DN0 273 aa5.64□□□□□ -1.51
SF3B1-210ENST00000482158 CCDC34Q96HJ3 373 aa5.64□□□□□ -1.51
SF3B1-210ENST00000482158 FIZ1Q96SL8 496 aa5.64□□□□□ -1.51
SF3B1-210ENST00000482158 GFI1Q99684 422 aa5.64□□□□□ -1.51
SF3B1-210ENST00000482158 GAREM1Q9H706 876 aa5.64□□□□□ -1.51
SF3B1-210ENST00000482158 NKIRAS2Q9NYR9 191 aa5.64□□□□□ -1.51
SF3B1-210ENST00000482158 PLAGL1Q9UM63 463 aa5.64□□□□□ -1.51
SF3B1-210ENST00000482158 GOLGA6L9A6NEM1 432 aa5.63□□□□□ -1.51
SF3B1-210ENST00000482158 CENPBP07199 599 aaPredicted RBP5.63□□□□□ -1.51
SF3B1-210ENST00000482158 IL11P20809 199 aa5.63□□□□□ -1.51
SF3B1-210ENST00000482158 S1PR1P21453 382 aa5.63□□□□□ -1.51
SF3B1-210ENST00000482158 RRM1P23921 792 aa5.63□□□□□ -1.51
SF3B1-210ENST00000482158 NNMTP40261 264 aa5.63□□□□□ -1.51
SF3B1-210ENST00000482158 PNLIPRP2P54317 469 aa5.63□□□□□ -1.51
SF3B1-210ENST00000482158 CLDN20P56880 219 aa5.63□□□□□ -1.51
SF3B1-210ENST00000482158 NUCB1Q02818 461 aa5.63□□□□□ -1.51
SF3B1-210ENST00000482158 MAD2L1Q13257 205 aaPredicted RBP5.63□□□□□ -1.51
SF3B1-210ENST00000482158 MYLK3Q32MK0 819 aa5.63□□□□□ -1.51
SF3B1-210ENST00000482158 KCNT1Q5JUK3 1230 aa5.63□□□□□ -1.51
SF3B1-210ENST00000482158 RGMBQ6NW40 437 aa5.63□□□□□ -1.51
SF3B1-210ENST00000482158 PAPD4Q6PIY7 484 aaKnown RBP5.63□□□□□ -1.51
SF3B1-210ENST00000482158 CEP97Q8IW35 865 aa5.63□□□□□ -1.51
SF3B1-210ENST00000482158 JAKMIP2Q96AA8 810 aa5.63□□□□□ -1.51
SF3B1-210ENST00000482158 C3orf30Q96M34 536 aa5.63□□□□□ -1.51
SF3B1-210ENST00000482158 PAFAH2Q99487 392 aa5.63□□□□□ -1.51
SF3B1-210ENST00000482158 TEX12Q9BXU0 123 aa5.63□□□□□ -1.51
SF3B1-210ENST00000482158 SEZ6LQ9BYH1 1024 aa5.63□□□□□ -1.51
SF3B1-210ENST00000482158 GIMAP4Q9NUV9 329 aa5.63□□□□□ -1.51
SF3B1-210ENST00000482158 TRMT1Q9NXH9 659 aaKnown RBP5.63□□□□□ -1.51
SF3B1-210ENST00000482158 MCM9Q9NXL9 1143 aa5.63□□□□□ -1.51
SF3B1-210ENST00000482158 WNT16Q9UBV4 365 aa5.63□□□□□ -1.51
SF3B1-210ENST00000482158 LOXL2Q9Y4K0 774 aa5.63□□□□□ -1.51
SF3B1-210ENST00000482158 TTLL3Q9Y4R7 772 aa5.63□□□□□ -1.51
SF3B1-210ENST00000482158 TMEM184BQ9Y519 407 aaPredicted RBP5.63□□□□□ -1.51
SF3B1-210ENST00000482158 IGLV5-37A0A075B6J1 123 aa5.62□□□□□ -1.51
SF3B1-210ENST00000482158 LNP1A1A4G5 178 aa5.62□□□□□ -1.51
SF3B1-210ENST00000482158 TMEM8BA6NDV4 472 aa5.62□□□□□ -1.51
SF3B1-210ENST00000482158 EIF4E1BA6NMX2 242 aaKnown RBP5.62□□□□□ -1.51
SF3B1-210ENST00000482158 A8MV72 311 aaPredicted RBP5.62□□□□□ -1.51
SF3B1-210ENST00000482158 ANKRD28O15084 1053 aa5.62□□□□□ -1.51
SF3B1-210ENST00000482158 KCNN4O15554 427 aa5.62□□□□□ -1.51
SF3B1-210ENST00000482158 TIMM44O43615 452 aa5.62□□□□□ -1.51
SF3B1-210ENST00000482158 NGFRP08138 427 aa5.62□□□□□ -1.51
SF3B1-210ENST00000482158 LINC00271P0C7V0 271 aa5.62□□□□□ -1.51
SF3B1-210ENST00000482158 PLA2G2AP14555 144 aa5.62□□□□□ -1.51
SF3B1-210ENST00000482158 CDKN2AP42771 156 aaKnown RBP5.62□□□□□ -1.51
SF3B1-210ENST00000482158 KCNJ4P48050 445 aa5.62□□□□□ -1.51
SF3B1-210ENST00000482158 THBS3P49746 956 aa5.62□□□□□ -1.51
SF3B1-210ENST00000482158 FOXG1P55316 489 aaPredicted RBP5.62□□□□□ -1.51
SF3B1-210ENST00000482158 CXCL9Q07325 125 aa5.62□□□□□ -1.51
SF3B1-210ENST00000482158 DLG1Q12959 904 aa5.62□□□□□ -1.51
SF3B1-210ENST00000482158 KCNC3Q14003 757 aa5.62□□□□□ -1.51
SF3B1-210ENST00000482158 NTRK2Q16620 822 aa5.62□□□□□ -1.51
SF3B1-210ENST00000482158 MCEMP1Q8IX19 187 aa5.62□□□□□ -1.51
SF3B1-210ENST00000482158 SLC38A9Q8NBW4 561 aa5.62□□□□□ -1.51
SF3B1-210ENST00000482158 TANKQ92844 425 aa5.62□□□□□ -1.51
SF3B1-210ENST00000482158 CEP295NLQ96MC4 621 aa5.62□□□□□ -1.51
SF3B1-210ENST00000482158 SLF1Q9BQI6 1058 aa5.62□□□□□ -1.51
SF3B1-210ENST00000482158 DNAJB4Q9UDY4 337 aa5.62□□□□□ -1.51
SF3B1-210ENST00000482158 CHORDC1Q9UHD1 332 aaPredicted RBP5.62□□□□□ -1.51
SF3B1-210ENST00000482158 POLG2Q9UHN1 485 aa5.62□□□□□ -1.51
SF3B1-210ENST00000482158 TSPYL4Q9UJ04 414 aa5.62□□□□□ -1.51
SF3B1-210ENST00000482158 NFS1Q9Y697 457 aa5.62□□□□□ -1.51
SF3B1-210ENST00000482158 A0A1W2PP11 408 aa5.61□□□□□ -1.51
SF3B1-210ENST00000482158 ZNF587BE7ETH6 402 aa5.61□□□□□ -1.51
SF3B1-210ENST00000482158 P4HA2O15460 535 aa5.61□□□□□ -1.51
SF3B1-210ENST00000482158 FCGR1AP12314 374 aa5.61□□□□□ -1.51
SF3B1-210ENST00000482158 PRLRP16471 622 aa5.61□□□□□ -1.51
SF3B1-210ENST00000482158 CORO1AP31146 461 aaKnown RBP5.61□□□□□ -1.51
SF3B1-210ENST00000482158 SEC61A1P61619 476 aaKnown RBP5.61□□□□□ -1.51
SF3B1-210ENST00000482158 TUBA1BP68363 451 aa5.61□□□□□ -1.51
SF3B1-210ENST00000482158 KIF5AQ12840 1032 aa5.61□□□□□ -1.51
SF3B1-210ENST00000482158 HLFQ16534 295 aa5.61□□□□□ -1.51
SF3B1-210ENST00000482158 SYT16Q17RD7 645 aa5.61□□□□□ -1.51
SF3B1-210ENST00000482158 PDS5AQ29RF7 1337 aaKnown RBP5.61□□□□□ -1.51
SF3B1-210ENST00000482158 KRTCAP3Q53RY4 240 aa5.61□□□□□ -1.51
SF3B1-210ENST00000482158 GARNL3Q5VVW2 1013 aa5.61□□□□□ -1.51
SF3B1-210ENST00000482158 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.61□□□□□ -1.51
SF3B1-210ENST00000482158 ADGRA1Q86SQ6 560 aa5.61□□□□□ -1.51
SF3B1-210ENST00000482158 CCDC190Q86UF4 302 aa5.61□□□□□ -1.51
SF3B1-210ENST00000482158 SATL1Q86VE3 508 aa5.61□□□□□ -1.51
SF3B1-210ENST00000482158 EPHX4Q8IUS5 362 aa5.61□□□□□ -1.51
SF3B1-210ENST00000482158 ARID3BQ8IVW6 561 aaPredicted RBP5.61□□□□□ -1.51
SF3B1-210ENST00000482158 RBMXL3Q8N7X1 1067 aaKnown RBP5.61□□□□□ -1.51
SF3B1-210ENST00000482158 MAGEC3Q8TD91 643 aa5.61□□□□□ -1.51
SF3B1-210ENST00000482158 PRPF31Q8WWY3 499 aaKnown RBP5.61□□□□□ -1.51
SF3B1-210ENST00000482158 NUDCD1Q96RS6 583 aa5.61□□□□□ -1.51
SF3B1-210ENST00000482158 ABHD1Q96SE0 405 aa5.61□□□□□ -1.51
SF3B1-210ENST00000482158 MTERF1Q99551 399 aaKnown RBP5.61□□□□□ -1.51
SF3B1-210ENST00000482158 TMEM39BQ9GZU3 492 aa5.61□□□□□ -1.51
SF3B1-210ENST00000482158 SIL1Q9H173 461 aa5.61□□□□□ -1.51
SF3B1-210ENST00000482158 PPIL3Q9H2H8 161 aaKnown RBP5.61□□□□□ -1.51
SF3B1-210ENST00000482158 ARHGEF38Q9NXL2 777 aa5.61□□□□□ -1.51
SF3B1-210ENST00000482158 SMARCAL1Q9NZC9 954 aa5.61□□□□□ -1.51
SF3B1-210ENST00000482158 MRPL15Q9P015 296 aaKnown RBP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms