RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 FAM83DQ9H4H8 585 aa11.53□□□□□ -0.56
HPS4-212ENST00000481910 MRM3Q9HC36 420 aaKnown RBP11.53□□□□□ -0.56
HPS4-212ENST00000481910 SLC2A6Q9UGQ3 507 aa11.53□□□□□ -0.56
HPS4-212ENST00000481910 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.53□□□□□ -0.56
HPS4-212ENST00000481910 THADAQ6YHU6 1953 aa11.53□□□□□ -0.56
HPS4-212ENST00000481910 RGSL1A5PLK6 1076 aa11.52□□□□□ -0.56
HPS4-212ENST00000481910 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.52□□□□□ -0.56
HPS4-212ENST00000481910 CCL22O00626 93 aa11.52□□□□□ -0.56
HPS4-212ENST00000481910 LIN7AO14910 233 aaPredicted RBP11.52□□□□□ -0.56
HPS4-212ENST00000481910 LATO43561 262 aa11.52□□□□□ -0.56
HPS4-212ENST00000481910 HRO43593 1189 aa11.52□□□□□ -0.56
HPS4-212ENST00000481910 SGTAO43765 313 aa11.52□□□□□ -0.56
HPS4-212ENST00000481910 IGHV4-34P06331 123 aa11.52□□□□□ -0.56
HPS4-212ENST00000481910 TUBBP07437 444 aa11.52□□□□□ -0.56
HPS4-212ENST00000481910 FAM153BP0C7A2 387 aa11.52□□□□□ -0.56
HPS4-212ENST00000481910 CNR2P34972 360 aa11.52□□□□□ -0.56
HPS4-212ENST00000481910 MAGEA4P43358 317 aa11.52□□□□□ -0.56
HPS4-212ENST00000481910 CCR5P51681 352 aa11.52□□□□□ -0.56
HPS4-212ENST00000481910 CREB5Q02930 508 aa11.52□□□□□ -0.56
HPS4-212ENST00000481910 FGL2Q14314 439 aa11.52□□□□□ -0.56
HPS4-212ENST00000481910 FAM153CQ494X1 144 aa11.52□□□□□ -0.56
HPS4-212ENST00000481910 ANKRD20A4Q4UJ75 823 aa11.52□□□□□ -0.56
HPS4-212ENST00000481910 SETMARQ53H47 684 aaPredicted RBP11.52□□□□□ -0.56
HPS4-212ENST00000481910 ALS2CLQ60I27 953 aa11.52□□□□□ -0.56
HPS4-212ENST00000481910 ESRP1Q6NXG1 681 aaKnown RBP11.52□□□□□ -0.56
HPS4-212ENST00000481910 CYP2U1Q7Z449 544 aa11.52□□□□□ -0.56
HPS4-212ENST00000481910 TMEM135Q86UB9 458 aa11.52□□□□□ -0.56
HPS4-212ENST00000481910 PALM2Q8IXS6 379 aa11.52□□□□□ -0.56
HPS4-212ENST00000481910 NRSN1Q8IZ57 195 aa11.52□□□□□ -0.56
HPS4-212ENST00000481910 OR13J1Q8NGT2 312 aa11.52□□□□□ -0.56
HPS4-212ENST00000481910 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.52□□□□□ -0.56
HPS4-212ENST00000481910 SNX19Q92543 992 aa11.52□□□□□ -0.56
HPS4-212ENST00000481910 FOXJ1Q92949 421 aa11.52□□□□□ -0.56
HPS4-212ENST00000481910 SCAMP4Q969E2 229 aa11.52□□□□□ -0.56
HPS4-212ENST00000481910 ZNF669Q96BR6 464 aaPredicted RBP11.52□□□□□ -0.56
HPS4-212ENST00000481910 AP2M1Q96CW1 435 aa11.52□□□□□ -0.56
HPS4-212ENST00000481910 NUS1Q96E22 293 aa11.52□□□□□ -0.56
HPS4-212ENST00000481910 DTD2Q96FN9 168 aa11.52□□□□□ -0.56
HPS4-212ENST00000481910 CFAP36Q96G28 342 aa11.52□□□□□ -0.56
HPS4-212ENST00000481910 CDKN2AIPNLQ96HQ2 116 aa11.52□□□□□ -0.56
HPS4-212ENST00000481910 C9orf72Q96LT7 481 aa11.52□□□□□ -0.56
HPS4-212ENST00000481910 TBATAQ96M53 351 aa11.52□□□□□ -0.56
HPS4-212ENST00000481910 C19orf43Q9BQ61 176 aa11.52□□□□□ -0.56
HPS4-212ENST00000481910 WDR83Q9BRX9 315 aaKnown RBP11.52□□□□□ -0.56
HPS4-212ENST00000481910 C1QTNF7Q9BXJ2 289 aa11.52□□□□□ -0.56
HPS4-212ENST00000481910 CDH19Q9H159 772 aa11.52□□□□□ -0.56
HPS4-212ENST00000481910 ZNF304Q9HCX3 659 aa11.52□□□□□ -0.56
HPS4-212ENST00000481910 IL26Q9NPH9 171 aa11.52□□□□□ -0.56
HPS4-212ENST00000481910 RAD18Q9NS91 495 aa11.52□□□□□ -0.56
HPS4-212ENST00000481910 TREX1Q9NSU2 369 aa11.52□□□□□ -0.56
HPS4-212ENST00000481910 KCTD5Q9NXV2 234 aa11.52□□□□□ -0.56
HPS4-212ENST00000481910 RIMKLBQ9ULI2 386 aa11.52□□□□□ -0.56
HPS4-212ENST00000481910 GON4LQ3T8J9 2241 aa11.52□□□□□ -0.56
HPS4-212ENST00000481910 ZNF318Q5VUA4 2279 aa11.52□□□□□ -0.56
HPS4-212ENST00000481910 USP1O94782 785 aa11.52□□□□□ -0.57
HPS4-212ENST00000481910 TTC4O95801 387 aa11.52□□□□□ -0.57
HPS4-212ENST00000481910 PAMP19021 973 aa11.52□□□□□ -0.57
HPS4-212ENST00000481910 SPAM1P38567 509 aa11.52□□□□□ -0.57
HPS4-212ENST00000481910 PRAMEP78395 509 aa11.52□□□□□ -0.57
HPS4-212ENST00000481910 LRRC14Q15048 493 aa11.52□□□□□ -0.57
HPS4-212ENST00000481910 AGERQ15109 404 aa11.52□□□□□ -0.57
HPS4-212ENST00000481910 SH2D4BQ5SQS7 431 aa11.52□□□□□ -0.57
HPS4-212ENST00000481910 CCBE1Q6UXH8 406 aaPredicted RBP11.52□□□□□ -0.57
HPS4-212ENST00000481910 CEP68Q76N32 757 aa11.52□□□□□ -0.57
HPS4-212ENST00000481910 LPCAT2Q7L5N7 544 aa11.52□□□□□ -0.57
HPS4-212ENST00000481910 C11orf74Q86VG3 221 aa11.52□□□□□ -0.57
HPS4-212ENST00000481910 ZBTB44Q8NCP5 570 aa11.52□□□□□ -0.57
HPS4-212ENST00000481910 ASB12Q8WXK4 309 aa11.52□□□□□ -0.57
HPS4-212ENST00000481910 HDAC10Q969S8 669 aa11.52□□□□□ -0.57
HPS4-212ENST00000481910 HSPA12BQ96MM6 686 aa11.52□□□□□ -0.57
HPS4-212ENST00000481910 FCRL3Q96P31 734 aaPredicted RBP11.52□□□□□ -0.57
HPS4-212ENST00000481910 RIOK2Q9BVS4 552 aaKnown RBP11.52□□□□□ -0.57
HPS4-212ENST00000481910 DUSP15Q9H1R2 295 aaPredicted RBP11.52□□□□□ -0.57
HPS4-212ENST00000481910 ABCG8Q9H221 673 aa11.52□□□□□ -0.57
HPS4-212ENST00000481910 ACBD3Q9H3P7 528 aa11.52□□□□□ -0.57
HPS4-212ENST00000481910 EBF2Q9HAK2 575 aa11.52□□□□□ -0.57
HPS4-212ENST00000481910 FKBPLQ9UIM3 349 aa11.52□□□□□ -0.57
HPS4-212ENST00000481910 MKL2Q9ULH7 1088 aa11.52□□□□□ -0.57
HPS4-212ENST00000481910 PAIP2BQ9ULR5 123 aaKnown RBP11.52□□□□□ -0.57
HPS4-212ENST00000481910 PCDHGA2Q9Y5H1 932 aa11.52□□□□□ -0.57
HPS4-212ENST00000481910 SDK1Q7Z5N4 2213 aa11.52□□□□□ -0.57
HPS4-212ENST00000481910 SCN8AQ9UQD0 1980 aa11.51□□□□□ -0.57
HPS4-212ENST00000481910 GLYATL1P3A0A0U1RQE8 302 aa11.51□□□□□ -0.57
HPS4-212ENST00000481910 MEI4A8MW99 385 aa11.51□□□□□ -0.57
HPS4-212ENST00000481910 C10orf142B7Z368 130 aa11.51□□□□□ -0.57
HPS4-212ENST00000481910 VAPBO95292 243 aa11.51□□□□□ -0.57
HPS4-212ENST00000481910 CD53P19397 219 aa11.51□□□□□ -0.57
HPS4-212ENST00000481910 ARSDP51689 593 aa11.51□□□□□ -0.57
HPS4-212ENST00000481910 PTPN5P54829 565 aa11.51□□□□□ -0.57
HPS4-212ENST00000481910 TUBA1BP68363 451 aa11.51□□□□□ -0.57
HPS4-212ENST00000481910 PHEXP78562 749 aa11.51□□□□□ -0.57
HPS4-212ENST00000481910 ACVR1Q04771 509 aa11.51□□□□□ -0.57
HPS4-212ENST00000481910 DYNC1I2Q13409 638 aaKnown RBP11.51□□□□□ -0.57
HPS4-212ENST00000481910 WSCD2Q2TBF2 565 aa11.51□□□□□ -0.57
HPS4-212ENST00000481910 FAM151BQ6UXP7 276 aa11.51□□□□□ -0.57
HPS4-212ENST00000481910 UNC5AQ6ZN44 842 aa11.51□□□□□ -0.57
HPS4-212ENST00000481910 TUBA1AQ71U36 451 aa11.51□□□□□ -0.57
HPS4-212ENST00000481910 SLC41A1Q8IVJ1 513 aa11.51□□□□□ -0.57
HPS4-212ENST00000481910 OR6P1Q8NGX9 317 aa11.51□□□□□ -0.57
HPS4-212ENST00000481910 MYOCQ99972 504 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms