RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.37■□□□□ 0.53
CLK1-211ENST00000481641 KAZNQ674X7 775 aa18.37■□□□□ 0.53
CLK1-211ENST00000481641 OR4D9Q8NGE8 314 aa18.37■□□□□ 0.53
CLK1-211ENST00000481641 TADA1Q96BN2 335 aa18.37■□□□□ 0.53
CLK1-211ENST00000481641 SLC38A3Q99624 504 aa18.37■□□□□ 0.53
CLK1-211ENST00000481641 ZMYND15Q9H091 742 aa18.37■□□□□ 0.53
CLK1-211ENST00000481641 OR2AG1Q9H205 316 aa18.37■□□□□ 0.53
CLK1-211ENST00000481641 GLOD4Q9HC38 313 aa18.37■□□□□ 0.53
CLK1-211ENST00000481641 DDX56Q9NY93 547 aaKnown RBP18.37■□□□□ 0.53
CLK1-211ENST00000481641 TFR2Q9UP52 801 aa18.37■□□□□ 0.53
CLK1-211ENST00000481641 ZNF711Q9Y462 761 aa18.37■□□□□ 0.53
CLK1-211ENST00000481641 RGSL1A5PLK6 1076 aa18.36■□□□□ 0.53
CLK1-211ENST00000481641 COL6A6A6NMZ7 2263 aa18.36■□□□□ 0.53
CLK1-211ENST00000481641 HGSO14964 777 aaPredicted RBP18.36■□□□□ 0.53
CLK1-211ENST00000481641 GRID2O43424 1007 aa18.36■□□□□ 0.53
CLK1-211ENST00000481641 SPOPO43791 374 aa18.36■□□□□ 0.53
CLK1-211ENST00000481641 NUAK1O60285 661 aa18.36■□□□□ 0.53
CLK1-211ENST00000481641 PMPCBO75439 489 aa18.36■□□□□ 0.53
CLK1-211ENST00000481641 THRAP10827 490 aa18.36■□□□□ 0.53
CLK1-211ENST00000481641 PECAM1P16284 738 aaPredicted RBP18.36■□□□□ 0.53
CLK1-211ENST00000481641 WT1P19544 449 aaPredicted RBP18.36■□□□□ 0.53
CLK1-211ENST00000481641 PTPN3P26045 913 aa18.36■□□□□ 0.53
CLK1-211ENST00000481641 SLC1A1P43005 524 aa18.36■□□□□ 0.53
CLK1-211ENST00000481641 ADCY2Q08462 1091 aa18.36■□□□□ 0.53
CLK1-211ENST00000481641 SQSTM1Q13501 440 aa18.36■□□□□ 0.53
CLK1-211ENST00000481641 TEX44Q53QW1 395 aa18.36■□□□□ 0.53
CLK1-211ENST00000481641 SNAP47Q5SQN1 464 aa18.36■□□□□ 0.53
CLK1-211ENST00000481641 MANEAQ5SRI9 462 aa18.36■□□□□ 0.53
CLK1-211ENST00000481641 IYDQ6PHW0 289 aa18.36■□□□□ 0.53
CLK1-211ENST00000481641 TMC3Q7Z5M5 1100 aa18.36■□□□□ 0.53
CLK1-211ENST00000481641 ZNF605Q86T29 641 aa18.36■□□□□ 0.53
CLK1-211ENST00000481641 DTX1Q86Y01 620 aa18.36■□□□□ 0.53
CLK1-211ENST00000481641 AHCYL2Q96HN2 611 aaKnown RBP18.36■□□□□ 0.53
CLK1-211ENST00000481641 GPR63Q9BZJ6 419 aa18.36■□□□□ 0.53
CLK1-211ENST00000481641 PRDM8Q9NQV8 689 aa18.36■□□□□ 0.53
CLK1-211ENST00000481641 OCIAD1Q9NX40 245 aa18.36■□□□□ 0.53
CLK1-211ENST00000481641 SPO11Q9Y5K1 396 aa18.36■□□□□ 0.53
CLK1-211ENST00000481641 A6NCN8 305 aa18.35■□□□□ 0.53
CLK1-211ENST00000481641 A8MU76 341 aa18.35■□□□□ 0.53
CLK1-211ENST00000481641 F5H423 210 aaPredicted RBP18.35■□□□□ 0.53
CLK1-211ENST00000481641 AURKAO14965 403 aa18.35■□□□□ 0.53
CLK1-211ENST00000481641 CST8O60676 142 aa18.35■□□□□ 0.53
CLK1-211ENST00000481641 SLC25A14O95258 325 aaPredicted RBP18.35■□□□□ 0.53
CLK1-211ENST00000481641 PLA2G2AP14555 144 aa18.35■□□□□ 0.53
CLK1-211ENST00000481641 CDKN2BP42772 138 aa18.35■□□□□ 0.53
CLK1-211ENST00000481641 HHEXQ03014 270 aa18.35■□□□□ 0.53
CLK1-211ENST00000481641 TRA2AQ13595 282 aaKnown RBP eCLIP18.35■□□□□ 0.532e-9■■■■□ 22.8
CLK1-211ENST00000481641 NOMO1Q15155 1222 aa18.35■□□□□ 0.53
CLK1-211ENST00000481641 TCEAL1Q15170 157 aa18.35■□□□□ 0.53
CLK1-211ENST00000481641 PLA2G4EQ3MJ16 856 aa18.35■□□□□ 0.53
CLK1-211ENST00000481641 ZNF569Q5MCW4 686 aa18.35■□□□□ 0.53
CLK1-211ENST00000481641 TMEM71Q6P5X7 295 aa18.35■□□□□ 0.53
CLK1-211ENST00000481641 ADGRG6Q86SQ4 1221 aa18.35■□□□□ 0.53
CLK1-211ENST00000481641 CNGA4Q8IV77 575 aa18.35■□□□□ 0.53
CLK1-211ENST00000481641 ART4Q93070 314 aa18.35■□□□□ 0.53
CLK1-211ENST00000481641 SGF29Q96ES7 293 aa18.35■□□□□ 0.53
CLK1-211ENST00000481641 TAAR9Q96RI9 348 aa18.35■□□□□ 0.53
CLK1-211ENST00000481641 CARD9Q9H257 536 aa18.35■□□□□ 0.53
CLK1-211ENST00000481641 RMI1Q9H9A7 625 aa18.35■□□□□ 0.53
CLK1-211ENST00000481641 MAGEE1Q9HCI5 957 aa18.35■□□□□ 0.53
CLK1-211ENST00000481641 BPIFA1Q9NP55 256 aa18.35■□□□□ 0.53
CLK1-211ENST00000481641 INTUQ9ULD6 942 aa18.35■□□□□ 0.53
CLK1-211ENST00000481641 A0A0A6YYK5 440 aaPredicted RBP18.34■□□□□ 0.53
CLK1-211ENST00000481641 MTX2O75431 263 aa18.34■□□□□ 0.53
CLK1-211ENST00000481641 BPIP17213 487 aa18.34■□□□□ 0.53
CLK1-211ENST00000481641 CSTF2P33240 577 aaKnown RBP eCLIP18.34■□□□□ 0.53
CLK1-211ENST00000481641 CD68P34810 354 aaPredicted RBP18.34■□□□□ 0.53
CLK1-211ENST00000481641 MAPK9P45984 424 aa18.34■□□□□ 0.53
CLK1-211ENST00000481641 GPLD1P80108 840 aa18.34■□□□□ 0.53
CLK1-211ENST00000481641 PRKD1Q15139 912 aaPredicted RBP18.34■□□□□ 0.53
CLK1-211ENST00000481641 TAZQ16635 292 aa18.34■□□□□ 0.53
CLK1-211ENST00000481641 LINC00303Q3SY05 128 aa18.34■□□□□ 0.53
CLK1-211ENST00000481641 TMEM164Q5U3C3 297 aa18.34■□□□□ 0.53
CLK1-211ENST00000481641 CRTC3Q6UUV7 619 aa18.34■□□□□ 0.53
CLK1-211ENST00000481641 SPOCD1Q6ZMY3 1216 aa18.34■□□□□ 0.53
CLK1-211ENST00000481641 AGBL5Q8NDL9 886 aa18.34■□□□□ 0.53
CLK1-211ENST00000481641 OR10G6Q8NH81 332 aa18.34■□□□□ 0.53
CLK1-211ENST00000481641 NCSTNQ92542 709 aa18.34■□□□□ 0.53
CLK1-211ENST00000481641 HAUS1Q96CS2 278 aa18.34■□□□□ 0.53
CLK1-211ENST00000481641 TEKT5Q96M29 485 aa18.34■□□□□ 0.53
CLK1-211ENST00000481641 SARS2Q9NP81 518 aaKnown RBP18.34■□□□□ 0.53
CLK1-211ENST00000481641 KLC4Q9NSK0 619 aa18.34■□□□□ 0.53
CLK1-211ENST00000481641 SLC23A2Q9UGH3 650 aa18.34■□□□□ 0.53
CLK1-211ENST00000481641 PCDHB11Q9Y5F2 797 aa18.34■□□□□ 0.53
CLK1-211ENST00000481641 B3GALT1Q9Y5Z6 326 aa18.34■□□□□ 0.53
CLK1-211ENST00000481641 ADGRG1Q9Y653 693 aa18.34■□□□□ 0.53
CLK1-211ENST00000481641 ALG6Q9Y672 507 aa18.34■□□□□ 0.53
CLK1-211ENST00000481641 EFCAB7A8K855 629 aa18.33■□□□□ 0.52
CLK1-211ENST00000481641 DUX1O43812 170 aa18.33■□□□□ 0.52
CLK1-211ENST00000481641 NDST3O95803 873 aa18.33■□□□□ 0.52
CLK1-211ENST00000481641 F3P13726 295 aa18.33■□□□□ 0.52
CLK1-211ENST00000481641 MAGEA1P43355 309 aa18.33■□□□□ 0.52
CLK1-211ENST00000481641 MARCKSL1P49006 195 aa18.33■□□□□ 0.52
CLK1-211ENST00000481641 CYP4F2P78329 520 aa18.33■□□□□ 0.52
CLK1-211ENST00000481641 WASHC5Q12768 1159 aa18.33■□□□□ 0.52
CLK1-211ENST00000481641 KHDC1Q4VXA5 237 aaKnown RBP18.33■□□□□ 0.52
CLK1-211ENST00000481641 ZC3H18Q86VM9 953 aaKnown RBP18.33■□□□□ 0.52
CLK1-211ENST00000481641 FAM129CQ86XR2 697 aa18.33■□□□□ 0.52
CLK1-211ENST00000481641 TRAM1L1Q8N609 369 aa18.33■□□□□ 0.52
CLK1-211ENST00000481641 EXD3Q8N9H8 876 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms