RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	HAO1	Q9UJM8	370 aa		3.04	□□□□□ -1.92
CCNL1-223	ENST00000481173	INTS6	Q9UL03	887 aa	Known RBP	3.04	□□□□□ -1.92
CCNL1-223	ENST00000481173	MKLN1	Q9UL63	735 aa		3.04	□□□□□ -1.92
CCNL1-223	ENST00000481173	CAPN7	Q9Y6W3	813 aa		3.04	□□□□□ -1.92
CCNL1-223	ENST00000481173	IGKV6D-41	A0A0C4DH26	115 aa		3.03	□□□□□ -1.92
CCNL1-223	ENST00000481173	RRN3P2	A6NIE6	340 aa		3.03	□□□□□ -1.92
CCNL1-223	ENST00000481173	TTC36	A6NLP5	189 aa		3.03	□□□□□ -1.92
CCNL1-223	ENST00000481173	BLOC1S5-TXNDC5	H3BN57	136 aa		3.03	□□□□□ -1.92
CCNL1-223	ENST00000481173	HS3ST1	O14792	307 aa		3.03	□□□□□ -1.92
CCNL1-223	ENST00000481173	PCDH7	O60245	1069 aa		3.03	□□□□□ -1.92
CCNL1-223	ENST00000481173	CTSV	O60911	334 aa		3.03	□□□□□ -1.92
CCNL1-223	ENST00000481173	KCNK5	O95279	499 aa		3.03	□□□□□ -1.92
CCNL1-223	ENST00000481173	CAVIN2	O95810	425 aa		3.03	□□□□□ -1.92
CCNL1-223	ENST00000481173	PYGL	P06737	847 aa		3.03	□□□□□ -1.92
CCNL1-223	ENST00000481173	HOXB5	P09067	269 aa		3.03	□□□□□ -1.92
CCNL1-223	ENST00000481173	CD48	P09326	243 aa		3.03	□□□□□ -1.92
CCNL1-223	ENST00000481173	MAPK9	P45984	424 aa		3.03	□□□□□ -1.92
CCNL1-223	ENST00000481173	TUB	P50607	506 aa		3.03	□□□□□ -1.92
CCNL1-223	ENST00000481173	LMO4	P61968	165 aa		3.03	□□□□□ -1.92
CCNL1-223	ENST00000481173	PLIN5	Q00G26	463 aa		3.03	□□□□□ -1.92
CCNL1-223	ENST00000481173	PTP4A2	Q12974	167 aa		3.03	□□□□□ -1.92
CCNL1-223	ENST00000481173	GAGE5	Q13069	117 aa		3.03	□□□□□ -1.92
CCNL1-223	ENST00000481173	GAGE6	Q13070	117 aa		3.03	□□□□□ -1.92
CCNL1-223	ENST00000481173	TBX2	Q13207	712 aa	Predicted RBP	3.03	□□□□□ -1.92
CCNL1-223	ENST00000481173	PPIG	Q13427	754 aa	Known RBP eCLIP	3.03	□□□□□ -1.92	5e-11	■□□□□ 9.8
CCNL1-223	ENST00000481173	ZC2HC1B	Q5TFG8	222 aa		3.03	□□□□□ -1.92
CCNL1-223	ENST00000481173	C15orf39	Q6ZRI6	1047 aa		3.03	□□□□□ -1.92
CCNL1-223	ENST00000481173	CACNA2D4	Q7Z3S7	1137 aa		3.03	□□□□□ -1.92
CCNL1-223	ENST00000481173	RBM15B	Q8NDT2	890 aa	Known RBP	3.03	□□□□□ -1.92
CCNL1-223	ENST00000481173	PSPC1	Q8WXF1	523 aa	Known RBP	3.03	□□□□□ -1.92
CCNL1-223	ENST00000481173	TM9SF4	Q92544	642 aa		3.03	□□□□□ -1.92
CCNL1-223	ENST00000481173	TAAR8	Q969N4	342 aa		3.03	□□□□□ -1.92
CCNL1-223	ENST00000481173	SMC6	Q96SB8	1091 aa		3.03	□□□□□ -1.92
CCNL1-223	ENST00000481173	EGFL8	Q99944	293 aa		3.03	□□□□□ -1.92
CCNL1-223	ENST00000481173	BRF2	Q9HAW0	419 aa		3.03	□□□□□ -1.92
CCNL1-223	ENST00000481173	MARCH4	Q9P2E8	410 aa	Predicted RBP	3.03	□□□□□ -1.92
CCNL1-223	ENST00000481173	NAALADL1	Q9UQQ1	740 aa		3.03	□□□□□ -1.92
CCNL1-223	ENST00000481173	CYP46A1	Q9Y6A2	500 aa		3.03	□□□□□ -1.92
CCNL1-223	ENST00000481173	C1orf226	A1L170	272 aa		3.02	□□□□□ -1.93
CCNL1-223	ENST00000481173	FAM90A26	D6RGX4	464 aa		3.02	□□□□□ -1.93
CCNL1-223	ENST00000481173		M0QZ24	198 aa		3.02	□□□□□ -1.93
CCNL1-223	ENST00000481173	ANKRD28	O15084	1053 aa		3.02	□□□□□ -1.93
CCNL1-223	ENST00000481173	HOXC11	O43248	304 aa	Predicted RBP	3.02	□□□□□ -1.93
CCNL1-223	ENST00000481173	TNFSF14	O43557	240 aa		3.02	□□□□□ -1.93
CCNL1-223	ENST00000481173	PRKN	O60260	465 aa	Predicted RBP	3.02	□□□□□ -1.93
CCNL1-223	ENST00000481173	NKX2-2	O95096	273 aa		3.02	□□□□□ -1.93
CCNL1-223	ENST00000481173	INHBA	P08476	426 aa		3.02	□□□□□ -1.93
CCNL1-223	ENST00000481173	ABCD3	P28288	659 aa		3.02	□□□□□ -1.93
CCNL1-223	ENST00000481173	FASLG	P48023	281 aa		3.02	□□□□□ -1.93
CCNL1-223	ENST00000481173	VAMP2	P63027	116 aa		3.02	□□□□□ -1.93
CCNL1-223	ENST00000481173	CDC16	Q13042	620 aa		3.02	□□□□□ -1.93
CCNL1-223	ENST00000481173	DCTN2	Q13561	401 aa	Known RBP	3.02	□□□□□ -1.93
CCNL1-223	ENST00000481173	CXorf66	Q5JRM2	361 aa	Predicted RBP	3.02	□□□□□ -1.93
CCNL1-223	ENST00000481173	TSSK4	Q6SA08	328 aa		3.02	□□□□□ -1.93
CCNL1-223	ENST00000481173	ANO5	Q75V66	913 aa		3.02	□□□□□ -1.93
CCNL1-223	ENST00000481173	PIWIL4	Q7Z3Z4	852 aa	Known RBP	3.02	□□□□□ -1.93
CCNL1-223	ENST00000481173	GTSCR1	Q86UQ5	136 aa		3.02	□□□□□ -1.93
CCNL1-223	ENST00000481173	CNTROB	Q8N137	903 aa		3.02	□□□□□ -1.93
CCNL1-223	ENST00000481173	LYG1	Q8N1E2	194 aa		3.02	□□□□□ -1.93
CCNL1-223	ENST00000481173	ADAD2	Q8NCV1	583 aa	Known RBP	3.02	□□□□□ -1.93
CCNL1-223	ENST00000481173	FCAMR	Q8WWV6	532 aa		3.02	□□□□□ -1.93
CCNL1-223	ENST00000481173	ST8SIA4	Q92187	359 aa		3.02	□□□□□ -1.93
CCNL1-223	ENST00000481173	SCRN2	Q96FV2	425 aa		3.02	□□□□□ -1.93
CCNL1-223	ENST00000481173	C17orf77	Q96MU5	243 aa		3.02	□□□□□ -1.93
CCNL1-223	ENST00000481173	ATOH8	Q96SQ7	321 aa		3.02	□□□□□ -1.93
CCNL1-223	ENST00000481173	BICC1	Q9H694	974 aa	Known RBP	3.02	□□□□□ -1.93
CCNL1-223	ENST00000481173	PRKRIP1	Q9H875	184 aa	Predicted RBP	3.02	□□□□□ -1.93
CCNL1-223	ENST00000481173	SLC52A3	Q9NQ40	469 aa		3.02	□□□□□ -1.93
CCNL1-223	ENST00000481173	KLHL9	Q9P2J3	617 aa		3.02	□□□□□ -1.93
CCNL1-223	ENST00000481173	ZNF624	Q9P2J8	865 aa	Predicted RBP	3.02	□□□□□ -1.93
CCNL1-223	ENST00000481173	CNOT8	Q9UFF9	292 aa	Known RBP	3.02	□□□□□ -1.93
CCNL1-223	ENST00000481173	KIAA1210	Q9ULL0	1709 aa		3.02	□□□□□ -1.93
CCNL1-223	ENST00000481173	PRAG1	Q86YV5	1406 aa		3.02	□□□□□ -1.93
CCNL1-223	ENST00000481173	OR5K3	A6NET4	321 aa		3.01	□□□□□ -1.93
CCNL1-223	ENST00000481173	C5orf60	A6NFR6	353 aa		3.01	□□□□□ -1.93
CCNL1-223	ENST00000481173	HHLA1	C9JL84	531 aa		3.01	□□□□□ -1.93
CCNL1-223	ENST00000481173	KCNN4	O15554	427 aa		3.01	□□□□□ -1.93
CCNL1-223	ENST00000481173	F9	P00740	461 aa		3.01	□□□□□ -1.93
CCNL1-223	ENST00000481173	ZNF182	P17025	639 aa	Predicted RBP	3.01	□□□□□ -1.93
CCNL1-223	ENST00000481173	AHR	P35869	848 aa		3.01	□□□□□ -1.93
CCNL1-223	ENST00000481173	HARS2	P49590	506 aa	Known RBP	3.01	□□□□□ -1.93
CCNL1-223	ENST00000481173	PPM1F	P49593	454 aa	Predicted RBP	3.01	□□□□□ -1.93
CCNL1-223	ENST00000481173	GNB1	P62873	340 aa		3.01	□□□□□ -1.93
CCNL1-223	ENST00000481173	MAD2L1	Q13257	205 aa	Predicted RBP	3.01	□□□□□ -1.93
CCNL1-223	ENST00000481173	BIRC3	Q13489	604 aa		3.01	□□□□□ -1.93
CCNL1-223	ENST00000481173	KRTAP13-3	Q3SY46	172 aa		3.01	□□□□□ -1.93
CCNL1-223	ENST00000481173	ZNF704	Q6ZNC4	412 aa	Predicted RBP	3.01	□□□□□ -1.93
CCNL1-223	ENST00000481173	TRPT1	Q86TN4	253 aa	Known RBP	3.01	□□□□□ -1.93
CCNL1-223	ENST00000481173	TRIM58	Q8NG06	486 aa		3.01	□□□□□ -1.93
CCNL1-223	ENST00000481173	THAP6	Q8TBB0	222 aa		3.01	□□□□□ -1.93
CCNL1-223	ENST00000481173	PHF21A	Q96BD5	680 aa		3.01	□□□□□ -1.93
CCNL1-223	ENST00000481173	SAAL1	Q96ER3	474 aa		3.01	□□□□□ -1.93
CCNL1-223	ENST00000481173	RRNAD1	Q96FB5	475 aa	Known RBP	3.01	□□□□□ -1.93
CCNL1-223	ENST00000481173	HARBI1	Q96MB7	349 aa		3.01	□□□□□ -1.93
CCNL1-223	ENST00000481173	TRPC7	Q9HCX4	862 aa		3.01	□□□□□ -1.93
CCNL1-223	ENST00000481173	LTB4R2	Q9NPC1	389 aa		3.01	□□□□□ -1.93
CCNL1-223	ENST00000481173	OR14J1	Q9UGF5	321 aa		3.01	□□□□□ -1.93
CCNL1-223	ENST00000481173	ARHGAP26	Q9UNA1	814 aa		3.01	□□□□□ -1.93
CCNL1-223	ENST00000481173	JRKL	Q9Y4A0	524 aa		3.01	□□□□□ -1.93
CCNL1-223	ENST00000481173	DUXA	A6NLW8	204 aa		3	□□□□□ -1.93

Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms