RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 NOTCH3Q9UM47 2321 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 ISM1B1AKI9 464 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 RIPPLY1Q0D2K3 151 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 TEAD4Q15561 434 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 INAVAQ3KP66 663 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 XKR4Q5GH76 650 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 SLCO6A1Q86UG4 719 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 RFT1Q96AA3 541 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 RNF157Q96PX1 679 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 EURLQ9NYK6 297 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 FBXO5Q9UKT4 447 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 OTOFQ9HC10 1997 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 CD2P06729 351 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 AKT2P31751 481 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 IL18Q14116 193 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 INTS5Q6P9B9 1019 aaKnown RBP9.5□□□□□ -0.89
VEGFA-212ENST00000480614 CACUL1Q86Y37 369 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 CCDC107Q8WV48 283 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 DNASE1L2Q92874 299 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 KLHL32Q96NJ5 620 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 EFR3BQ9Y2G0 817 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 TRAF6Q9Y4K3 522 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 PEX16Q9Y5Y5 336 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 FAM86B1E9PN63 330 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 F8VP50 259 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 DHX15O43143 795 aaKnown RBP9.49□□□□□ -0.89
VEGFA-212ENST00000480614 FAM86B2P0C5J1 330 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 ZFP69Q49AA0 526 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 NBPF12Q5TAG4 269 aaPredicted RBP9.49□□□□□ -0.89
VEGFA-212ENST00000480614 PGBD2Q6P3X8 592 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 IQCF2Q8IXL9 164 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 C1GALT1C1Q96EU7 318 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 ACO2Q99798 780 aaKnown RBP9.49□□□□□ -0.89
VEGFA-212ENST00000480614 TNS2Q63HR2 1409 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 RPP40O75818 363 aaKnown RBP9.49□□□□□ -0.89
VEGFA-212ENST00000480614 METTL18O95568 372 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 CYP17A1P05093 508 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 TUBB3Q13509 450 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 ZNF311Q5JNZ3 666 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 FAM151BQ6UXP7 276 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 ADGRG6Q86SQ4 1221 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 C10orf107Q8IVU9 208 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 ADAMTS15Q8TE58 950 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 AIFM2Q9BRQ8 373 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 SGK2Q9HBY8 427 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 ASF1AQ9Y294 204 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 PITPNM1O00562 1244 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 KERAO60938 352 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 USP12O75317 370 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 ATP5A1P25705 553 aaKnown RBP9.49□□□□□ -0.89
VEGFA-212ENST00000480614 VARSP26640 1264 aaKnown RBP9.49□□□□□ -0.89
VEGFA-212ENST00000480614 CPSF7Q8N684 471 aaKnown RBP9.49□□□□□ -0.89
VEGFA-212ENST00000480614 ADCY4Q8NFM4 1077 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 BTN2A3PQ96KV6 586 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 TTPALQ9BTX7 342 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 TBC1D10AQ9BXI6 508 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 MRPS17Q9Y2R5 130 aaKnown RBP9.49□□□□□ -0.89
VEGFA-212ENST00000480614 PEX11AO75192 247 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 STK16O75716 305 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 IFNW1P05000 195 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 GNALP38405 381 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 MASP1P48740 699 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 PLCZ1Q86YW0 608 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 RAVER1Q8IY67 606 aaKnown RBP9.49□□□□□ -0.89
VEGFA-212ENST00000480614 FAM163AQ96GL9 167 aaPredicted RBP9.49□□□□□ -0.89
VEGFA-212ENST00000480614 FAM129BQ96TA1 746 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 GPATCH1Q9BRR8 931 aaKnown RBP9.49□□□□□ -0.89
VEGFA-212ENST00000480614 SCGNO76038 276 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 PRNPP04156 253 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 MTHFRP42898 656 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 ADNP2Q6IQ32 1131 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 B3GALT6Q96L58 329 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 CDH19Q9H159 772 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 MIOSQ9NXC5 875 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 MYPNQ86TC9 1320 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 C22orf31O95567 290 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 LAMP2P13473 410 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 ANPEPP15144 967 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 KLRK1P26718 216 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 HSD17B2P37059 387 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 KCTD21Q4G0X4 260 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 C11orf65Q8NCR3 313 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 RAD51AP1Q96B01 352 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.49□□□□□ -0.89
VEGFA-212ENST00000480614 SPATA31D1Q6ZQQ2 1576 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 LRRC72A6NJI9 287 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 NRG3P56975 720 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 UBE2R2Q712K3 238 aaPredicted RBP9.49□□□□□ -0.89
VEGFA-212ENST00000480614 C15orf40Q8WUR7 153 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 AGXT2Q9BYV1 514 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 NFATC1O95644 943 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 FAM153BP0C7A2 387 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 SOX10P56693 466 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 NTRK3Q16288 839 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 CERCAMQ5T4B2 595 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 FAM131AQ6UXB0 335 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 CSDE1O75534 798 aaKnown RBP9.49□□□□□ -0.89
VEGFA-212ENST00000480614 PTPN5P54829 565 aa9.49□□□□□ -0.89
VEGFA-212ENST00000480614 SUZ12Q15022 739 aaKnown RBP9.49□□□□□ -0.89
VEGFA-212ENST00000480614 RAP1GAP2Q684P5 730 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms