RNA–Protein interactions for RNA: ENST00000478085.5

SGSM3-209, Transcript of small G protein signaling modulator 3, humanhuman

TSL 2

Gene SGSM3, Length 4,218 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGSM3-209ENST00000478085 VITQ6UXI7 678 aa11.79□□□□□ -0.52
SGSM3-209ENST00000478085 ZNF621Q6ZSS3 439 aa11.79□□□□□ -0.52
SGSM3-209ENST00000478085 SYT12Q8IV01 421 aa11.79□□□□□ -0.52
SGSM3-209ENST00000478085 ATL1Q8WXF7 558 aa11.79□□□□□ -0.52
SGSM3-209ENST00000478085 LZICQ8WZA0 190 aa11.79□□□□□ -0.52
SGSM3-209ENST00000478085 SEC14L1Q92503 715 aa11.79□□□□□ -0.52
SGSM3-209ENST00000478085 TIFAQ96CG3 184 aa11.79□□□□□ -0.52
SGSM3-209ENST00000478085 FAM120BQ96EK7 910 aaKnown RBP11.79□□□□□ -0.52
SGSM3-209ENST00000478085 SLC25A23Q9BV35 468 aa11.79□□□□□ -0.52
SGSM3-209ENST00000478085 DCLRE1BQ9H816 532 aa11.79□□□□□ -0.52
SGSM3-209ENST00000478085 PADI4Q9UM07 663 aa11.79□□□□□ -0.52
SGSM3-209ENST00000478085 ACTL7AQ9Y615 435 aa11.79□□□□□ -0.52
SGSM3-209ENST00000478085 PTPRZ1P23471 2315 aaPredicted RBP11.79□□□□□ -0.52
SGSM3-209ENST00000478085 TUBGCP6Q96RT7 1819 aa11.79□□□□□ -0.52
SGSM3-209ENST00000478085 OTCP00480 354 aa11.79□□□□□ -0.52
SGSM3-209ENST00000478085 RPL38P63173 70 aaKnown RBP11.79□□□□□ -0.52
SGSM3-209ENST00000478085 KRT72Q14CN4 511 aa11.79□□□□□ -0.52
SGSM3-209ENST00000478085 FAM9CQ8IZT9 166 aa11.79□□□□□ -0.52
SGSM3-209ENST00000478085 CNTD1Q8N815 330 aa11.79□□□□□ -0.52
SGSM3-209ENST00000478085 PNPLA1Q8N8W4 532 aa11.79□□□□□ -0.52
SGSM3-209ENST00000478085 OVCA2Q8WZ82 227 aa11.79□□□□□ -0.52
SGSM3-209ENST00000478085 TBCDQ9BTW9 1192 aa11.79□□□□□ -0.52
SGSM3-209ENST00000478085 CDH19Q9H159 772 aa11.79□□□□□ -0.52
SGSM3-209ENST00000478085 PSMD13Q9UNM6 376 aa11.79□□□□□ -0.52
SGSM3-209ENST00000478085 TMEM189-UBE2V1I3L0A0 370 aa11.78□□□□□ -0.52
SGSM3-209ENST00000478085 ESR1P03372 595 aa11.78□□□□□ -0.52
SGSM3-209ENST00000478085 S100A3P33764 101 aa11.78□□□□□ -0.52
SGSM3-209ENST00000478085 ZNF33AQ06730 810 aa11.78□□□□□ -0.52
SGSM3-209ENST00000478085 MGAT3Q09327 533 aa11.78□□□□□ -0.52
SGSM3-209ENST00000478085 DYNC1I2Q13409 638 aaKnown RBP11.78□□□□□ -0.52
SGSM3-209ENST00000478085 MED21Q13503 144 aa11.78□□□□□ -0.52
SGSM3-209ENST00000478085 RAB30Q15771 203 aa11.78□□□□□ -0.52
SGSM3-209ENST00000478085 MYLK3Q32MK0 819 aa11.78□□□□□ -0.52
SGSM3-209ENST00000478085 PITRM1Q5JRX3 1037 aa11.78□□□□□ -0.52
SGSM3-209ENST00000478085 EMC10Q5UCC4 262 aa11.78□□□□□ -0.52
SGSM3-209ENST00000478085 TMEM220Q6QAJ8 160 aa11.78□□□□□ -0.52
SGSM3-209ENST00000478085 ZC3HC1Q86WB0 502 aaKnown RBP11.78□□□□□ -0.52
SGSM3-209ENST00000478085 FITM2Q8N6M3 262 aa11.78□□□□□ -0.52
SGSM3-209ENST00000478085 ZNF781Q8N8C0 355 aa11.78□□□□□ -0.52
SGSM3-209ENST00000478085 INPP5DQ92835 1189 aa11.78□□□□□ -0.52
SGSM3-209ENST00000478085 VPS50Q96JG6 964 aa11.78□□□□□ -0.52
SGSM3-209ENST00000478085 PSKH2Q96QS6 385 aa11.78□□□□□ -0.52
SGSM3-209ENST00000478085 CSNK1G1Q9HCP0 422 aa11.78□□□□□ -0.52
SGSM3-209ENST00000478085 NDUFS2O75306 463 aa11.78□□□□□ -0.52
SGSM3-209ENST00000478085 PCCBP05166 539 aa11.78□□□□□ -0.52
SGSM3-209ENST00000478085 NAE1Q13564 534 aa11.78□□□□□ -0.52
SGSM3-209ENST00000478085 CHRNA6Q15825 494 aa11.78□□□□□ -0.52
SGSM3-209ENST00000478085 CYP2A13Q16696 494 aa11.78□□□□□ -0.52
SGSM3-209ENST00000478085 PIM3Q86V86 326 aa11.78□□□□□ -0.52
SGSM3-209ENST00000478085 ZBTB2Q8N680 514 aa11.78□□□□□ -0.52
SGSM3-209ENST00000478085 DNAJB14Q8TBM8 379 aa11.78□□□□□ -0.52
SGSM3-209ENST00000478085 CXorf40BQ96DE9 158 aa11.78□□□□□ -0.52
SGSM3-209ENST00000478085 AHSPQ9NZD4 102 aa11.78□□□□□ -0.52
SGSM3-209ENST00000478085 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.78□□□□□ -0.52
SGSM3-209ENST00000478085 ISM1B1AKI9 464 aa11.78□□□□□ -0.52
SGSM3-209ENST00000478085 CACNB4O00305 520 aaPredicted RBP11.78□□□□□ -0.52
SGSM3-209ENST00000478085 ZNF682O95780 498 aa11.78□□□□□ -0.52
SGSM3-209ENST00000478085 EIF2S1P05198 315 aaKnown RBP11.78□□□□□ -0.52
SGSM3-209ENST00000478085 MSX2P35548 267 aaPredicted RBP11.78□□□□□ -0.52
SGSM3-209ENST00000478085 CHI3L1P36222 383 aaPredicted RBP11.78□□□□□ -0.52
SGSM3-209ENST00000478085 LMAN2Q12907 356 aa11.78□□□□□ -0.52
SGSM3-209ENST00000478085 MBTPS1Q14703 1052 aa11.78□□□□□ -0.52
SGSM3-209ENST00000478085 XKR4Q5GH76 650 aa11.78□□□□□ -0.52
SGSM3-209ENST00000478085 FAM26DQ5JW98 314 aa11.78□□□□□ -0.52
SGSM3-209ENST00000478085 UBAP2Q5T6F2 1119 aaKnown RBP11.78□□□□□ -0.52
SGSM3-209ENST00000478085 MTSS1LQ765P7 747 aa11.78□□□□□ -0.52
SGSM3-209ENST00000478085 TMEM25Q86YD3 366 aa11.78□□□□□ -0.52
SGSM3-209ENST00000478085 TCEAL8Q8IYN2 117 aa11.78□□□□□ -0.52
SGSM3-209ENST00000478085 ST13P4Q8IZP2 240 aaPredicted RBP11.78□□□□□ -0.52
SGSM3-209ENST00000478085 MTMR10Q9NXD2 777 aa11.78□□□□□ -0.52
SGSM3-209ENST00000478085 SNX6Q9UNH7 406 aa11.78□□□□□ -0.52
SGSM3-209ENST00000478085 KANSL1LA0AUZ9 987 aa11.78□□□□□ -0.52
SGSM3-209ENST00000478085 ATG13O75143 517 aa11.78□□□□□ -0.52
SGSM3-209ENST00000478085 STK16O75716 305 aa11.78□□□□□ -0.52
SGSM3-209ENST00000478085 PSMA4P25789 261 aaKnown RBP11.78□□□□□ -0.52
SGSM3-209ENST00000478085 MAD2L1Q13257 205 aaPredicted RBP11.78□□□□□ -0.52
SGSM3-209ENST00000478085 ACAP2Q15057 778 aa11.78□□□□□ -0.52
SGSM3-209ENST00000478085 AGAP11Q8TF27 550 aa11.78□□□□□ -0.52
SGSM3-209ENST00000478085 FCRL3Q96P31 734 aaPredicted RBP11.78□□□□□ -0.52
SGSM3-209ENST00000478085 LINC00597Q9H2U6 94 aa11.78□□□□□ -0.52
SGSM3-209ENST00000478085 IPPKQ9H8X2 491 aa11.78□□□□□ -0.52
SGSM3-209ENST00000478085 PHPT1Q9NRX4 125 aaPredicted RBP11.78□□□□□ -0.52
SGSM3-209ENST00000478085 TRPC4Q9UBN4 977 aa11.78□□□□□ -0.52
SGSM3-209ENST00000478085 FETUBQ9UGM5 382 aa11.78□□□□□ -0.52
SGSM3-209ENST00000478085 WARS2Q9UGM6 360 aaKnown RBP11.78□□□□□ -0.52
SGSM3-209ENST00000478085 WNK3Q9BYP7 1800 aa11.77□□□□□ -0.52
SGSM3-209ENST00000478085 MGRN1O60291 552 aa11.77□□□□□ -0.52
SGSM3-209ENST00000478085 COX4I1P13073 169 aa11.77□□□□□ -0.52
SGSM3-209ENST00000478085 ME2P23368 584 aa11.77□□□□□ -0.52
SGSM3-209ENST00000478085 PLOD1Q02809 727 aaPredicted RBP11.77□□□□□ -0.52
SGSM3-209ENST00000478085 CHST15Q7LFX5 561 aaPredicted RBP11.77□□□□□ -0.52
SGSM3-209ENST00000478085 CLNKQ7Z7G1 428 aa11.77□□□□□ -0.52
SGSM3-209ENST00000478085 HDDC3Q8N4P3 179 aa11.77□□□□□ -0.52
SGSM3-209ENST00000478085 CYGBQ8WWM9 190 aa11.77□□□□□ -0.52
SGSM3-209ENST00000478085 HERVK_113Q902F9 699 aa11.77□□□□□ -0.52
SGSM3-209ENST00000478085 NOL11Q9H8H0 719 aaKnown RBP11.77□□□□□ -0.52
SGSM3-209ENST00000478085 SPHK2Q9NRA0 654 aa11.77□□□□□ -0.52
SGSM3-209ENST00000478085 C9JVG2 144 aa11.77□□□□□ -0.53
SGSM3-209ENST00000478085 H0Y858 1186 aa11.77□□□□□ -0.53
SGSM3-209ENST00000478085 LRATO95237 230 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms