RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 SIX6OS1Q8N1H7 587 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 GUF1Q8N442 669 aaKnown RBP4.68□□□□□ -1.66
CKS1B-207ENST00000477676 ZNF248Q8NDW4 579 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 ENGASEQ8NFI3 743 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 IRGQQ8WZA9 623 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 ARRDC3Q96B67 414 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 MIEF2Q96C03 454 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 WBP1Q96G27 269 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 FAXDC2Q96IV6 333 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 VCPIP1Q96JH7 1222 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 BMFQ96LC9 184 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 APOLD1Q96LR9 279 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 ZNF578Q96N58 590 aaPredicted RBP4.68□□□□□ -1.66
CKS1B-207ENST00000477676 ZNF396Q96N95 335 aaPredicted RBP4.68□□□□□ -1.66
CKS1B-207ENST00000477676 DHRS4Q9BTZ2 278 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 IMPG2Q9BZV3 1241 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 MIS12Q9H081 205 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 PIF1Q9H611 641 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 ACP6Q9NPH0 428 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 ANLNQ9NQW6 1124 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 KLHL11Q9NVR0 708 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 SAE1Q9UBE0 346 aaPredicted RBP4.68□□□□□ -1.66
CKS1B-207ENST00000477676 CBLCQ9ULV8 474 aa4.68□□□□□ -1.66
CKS1B-207ENST00000477676 CELSR1Q9NYQ6 3014 aa4.67□□□□□ -1.66
CKS1B-207ENST00000477676 TRIM49BA6NDI0 452 aa4.67□□□□□ -1.66
CKS1B-207ENST00000477676 POM121BA6NF01 834 aa4.67□□□□□ -1.66
CKS1B-207ENST00000477676 KRTAP29-1A8MX34 341 aaPredicted RBP4.67□□□□□ -1.66
CKS1B-207ENST00000477676 CDRT15L2A8MXV6 281 aa4.67□□□□□ -1.66
CKS1B-207ENST00000477676 KCNU1A8MYU2 1149 aa4.67□□□□□ -1.66
CKS1B-207ENST00000477676 K7ERQ8 282 aa4.67□□□□□ -1.66
CKS1B-207ENST00000477676 M0QYV0 167 aa4.67□□□□□ -1.66
CKS1B-207ENST00000477676 PPP1R12AO14974 1030 aaPredicted RBP4.67□□□□□ -1.66
CKS1B-207ENST00000477676 RAD51BO15315 384 aa4.67□□□□□ -1.66
CKS1B-207ENST00000477676 KLK10O43240 276 aa4.67□□□□□ -1.66
CKS1B-207ENST00000477676 SNAP91O60641 907 aa4.67□□□□□ -1.66
CKS1B-207ENST00000477676 RNASEH1O60930 286 aaKnown RBP4.67□□□□□ -1.66
CKS1B-207ENST00000477676 ZNF821O75541 412 aaPredicted RBP4.67□□□□□ -1.66
CKS1B-207ENST00000477676 CNTN5O94779 1100 aa4.67□□□□□ -1.66
CKS1B-207ENST00000477676 CENPBP07199 599 aaPredicted RBP4.67□□□□□ -1.66
CKS1B-207ENST00000477676 MMEP08473 750 aa4.67□□□□□ -1.66
CKS1B-207ENST00000477676 THEGLP0DJG4 465 aa4.67□□□□□ -1.66
CKS1B-207ENST00000477676 KRT13P13646 458 aa4.67□□□□□ -1.66
CKS1B-207ENST00000477676 ITGB6P18564 788 aa4.67□□□□□ -1.66
CKS1B-207ENST00000477676 CMA1P23946 247 aa4.67□□□□□ -1.66
CKS1B-207ENST00000477676 PRCPP42785 496 aa4.67□□□□□ -1.66
CKS1B-207ENST00000477676 GPD2P43304 727 aa4.67□□□□□ -1.66
CKS1B-207ENST00000477676 PLK1P53350 603 aa4.67□□□□□ -1.66
CKS1B-207ENST00000477676 TMPRSS3P57727 454 aa4.67□□□□□ -1.66
CKS1B-207ENST00000477676 KRTAP10-11P60412 298 aa4.67□□□□□ -1.66
CKS1B-207ENST00000477676 ST8SIA6P61647 398 aa4.67□□□□□ -1.66
CKS1B-207ENST00000477676 E2F1Q01094 437 aa4.67□□□□□ -1.66
CKS1B-207ENST00000477676 RHDQ02161 417 aa4.67□□□□□ -1.66
CKS1B-207ENST00000477676 SERINC3Q13530 473 aa4.67□□□□□ -1.66
CKS1B-207ENST00000477676 CDH18Q13634 790 aa4.67□□□□□ -1.66
CKS1B-207ENST00000477676 RIN1Q13671 783 aa4.67□□□□□ -1.66
CKS1B-207ENST00000477676 FZD2Q14332 565 aa4.67□□□□□ -1.66
CKS1B-207ENST00000477676 ELAVL3Q14576 367 aaKnown RBP4.67□□□□□ -1.66
CKS1B-207ENST00000477676 DLG2Q15700 870 aa4.67□□□□□ -1.66
CKS1B-207ENST00000477676 TBR1Q16650 682 aa4.67□□□□□ -1.66
CKS1B-207ENST00000477676 ISXQ2M1V0 245 aa4.67□□□□□ -1.66
CKS1B-207ENST00000477676 LINC00303Q3SY05 128 aa4.67□□□□□ -1.66
CKS1B-207ENST00000477676 TAF1BQ53T94 588 aaPredicted RBP4.67□□□□□ -1.66
CKS1B-207ENST00000477676 OTUD1Q5VV17 481 aaPredicted RBP4.67□□□□□ -1.66
CKS1B-207ENST00000477676 KANK2Q63ZY3 851 aa4.67□□□□□ -1.66
CKS1B-207ENST00000477676 SEL1L3Q68CR1 1132 aa4.67□□□□□ -1.66
CKS1B-207ENST00000477676 ANKRD40Q6AI12 368 aa4.67□□□□□ -1.66
CKS1B-207ENST00000477676 OR6B2Q6IFH4 312 aa4.67□□□□□ -1.66
CKS1B-207ENST00000477676 FBXL22Q6P050 247 aa4.67□□□□□ -1.66
CKS1B-207ENST00000477676 DENND1BQ6P3S1 775 aa4.67□□□□□ -1.66
CKS1B-207ENST00000477676 GUSBP11Q6P575 273 aa4.67□□□□□ -1.66
CKS1B-207ENST00000477676 TMEM270Q6UE05 265 aa4.67□□□□□ -1.66
CKS1B-207ENST00000477676 CRTC1Q6UUV9 634 aa4.67□□□□□ -1.66
CKS1B-207ENST00000477676 ABI3BPQ7Z7G0 1075 aa4.67□□□□□ -1.66
CKS1B-207ENST00000477676 PRPF39Q86UA1 669 aaKnown RBP4.67□□□□□ -1.66
CKS1B-207ENST00000477676 LURAP1LQ8IV03 231 aa4.67□□□□□ -1.66
CKS1B-207ENST00000477676 CCAR2Q8N163 923 aaKnown RBP4.67□□□□□ -1.66
CKS1B-207ENST00000477676 TTC39CQ8N584 583 aa4.67□□□□□ -1.66
CKS1B-207ENST00000477676 SH2D3CQ8N5H7 860 aa4.67□□□□□ -1.66
CKS1B-207ENST00000477676 CHST14Q8NCH0 376 aa4.67□□□□□ -1.66
CKS1B-207ENST00000477676 UBE2Q2Q8WVN8 375 aa4.67□□□□□ -1.66
CKS1B-207ENST00000477676 CFHR4Q92496 578 aa4.67□□□□□ -1.66
CKS1B-207ENST00000477676 SLC35C1Q96A29 364 aa4.67□□□□□ -1.66
CKS1B-207ENST00000477676 FUBP1Q96AE4 644 aaKnown RBP4.67□□□□□ -1.66
CKS1B-207ENST00000477676 SLC7A6OSQ96CW6 309 aaPredicted RBP4.67□□□□□ -1.66
CKS1B-207ENST00000477676 ATXN7L3BQ96GX2 97 aa4.67□□□□□ -1.66
CKS1B-207ENST00000477676 HSFY1Q96LI6 401 aa4.67□□□□□ -1.66
CKS1B-207ENST00000477676 SLC46A1Q96NT5 459 aa4.67□□□□□ -1.66
CKS1B-207ENST00000477676 SPAG5Q96R06 1193 aa4.67□□□□□ -1.66
CKS1B-207ENST00000477676 PSMB7Q99436 277 aa4.67□□□□□ -1.66
CKS1B-207ENST00000477676 KLF6Q99612 283 aaPredicted RBP4.67□□□□□ -1.66
CKS1B-207ENST00000477676 FEM1AQ9BSK4 669 aa4.67□□□□□ -1.66
CKS1B-207ENST00000477676 TRIM4Q9C037 500 aa4.67□□□□□ -1.66
CKS1B-207ENST00000477676 SLC6A15Q9H2J7 730 aa4.67□□□□□ -1.66
CKS1B-207ENST00000477676 TCEAL2Q9H3H9 227 aaPredicted RBP4.67□□□□□ -1.66
CKS1B-207ENST00000477676 CLMPQ9H6B4 373 aa4.67□□□□□ -1.66
CKS1B-207ENST00000477676 POLR1BQ9H9Y6 1135 aa4.67□□□□□ -1.66
CKS1B-207ENST00000477676 SATB2Q9UPW6 733 aa4.67□□□□□ -1.66
CKS1B-207ENST00000477676 DMTF1Q9Y222 760 aa4.67□□□□□ -1.66
CKS1B-207ENST00000477676 PCDHA9Q9Y5H5 950 aa4.67□□□□□ -1.66
CKS1B-207ENST00000477676 ENTPD2Q9Y5L3 495 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms