RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 SLC25A14O95258 325 aaPredicted RBP16.05■□□□□ 0.16
VHL-203ENST00000477538 HSD17B3P37058 310 aa16.05■□□□□ 0.16
VHL-203ENST00000477538 SLC1A2P43004 574 aa16.05■□□□□ 0.16
VHL-203ENST00000477538 CDK3Q00526 305 aa16.05■□□□□ 0.16
VHL-203ENST00000477538 UAP1Q16222 522 aaPredicted RBP16.05■□□□□ 0.16
VHL-203ENST00000477538 GPRC6AQ5T6X5 926 aa16.05■□□□□ 0.16
VHL-203ENST00000477538 LYPLAL1Q5VWZ2 237 aa16.05■□□□□ 0.16
VHL-203ENST00000477538 ZC3H14Q6PJT7 736 aaKnown RBP16.05■□□□□ 0.16
VHL-203ENST00000477538 KYAT3Q6YP21 454 aaKnown RBP16.05■□□□□ 0.16
VHL-203ENST00000477538 CERS6Q6ZMG9 384 aa16.05■□□□□ 0.16
VHL-203ENST00000477538 PRR23BQ6ZRT6 265 aa16.05■□□□□ 0.16
VHL-203ENST00000477538 SDCCAG8Q86SQ7 713 aaPredicted RBP16.05■□□□□ 0.16
VHL-203ENST00000477538 SERPINA9Q86WD7 417 aa16.05■□□□□ 0.16
VHL-203ENST00000477538 CILP2Q8IUL8 1156 aa16.05■□□□□ 0.16
VHL-203ENST00000477538 PHYKPLQ8IUZ5 450 aa16.05■□□□□ 0.16
VHL-203ENST00000477538 CNTN4Q8IWV2 1026 aa16.05■□□□□ 0.16
VHL-203ENST00000477538 MREGQ8N565 214 aa16.05■□□□□ 0.16
VHL-203ENST00000477538 GDAP1Q8TB36 358 aa16.05■□□□□ 0.16
VHL-203ENST00000477538 HNRNPLLQ8WVV9 542 aaKnown RBP16.05■□□□□ 0.16
VHL-203ENST00000477538 BMFQ96LC9 184 aa16.05■□□□□ 0.16
VHL-203ENST00000477538 TTC1Q99614 292 aa16.05■□□□□ 0.16
VHL-203ENST00000477538 APOOQ9BUR5 198 aa16.05■□□□□ 0.16
VHL-203ENST00000477538 TEX101Q9BY14 249 aa16.05■□□□□ 0.16
VHL-203ENST00000477538 FUT8Q9BYC5 575 aa16.05■□□□□ 0.16
VHL-203ENST00000477538 ACSS3Q9H6R3 686 aa16.05■□□□□ 0.16
VHL-203ENST00000477538 SMYD2Q9NRG4 433 aa16.05■□□□□ 0.16
VHL-203ENST00000477538 AASDHPPTQ9NRN7 309 aa16.05■□□□□ 0.16
VHL-203ENST00000477538 PHPT1Q9NRX4 125 aaPredicted RBP16.05■□□□□ 0.16
VHL-203ENST00000477538 RABGEF1Q9UJ41 708 aa16.05■□□□□ 0.16
VHL-203ENST00000477538 CNOT6Q9ULM6 557 aaKnown RBP16.05■□□□□ 0.16
VHL-203ENST00000477538 OR1A2Q9Y585 309 aa16.05■□□□□ 0.16
VHL-203ENST00000477538 R4GN57 208 aa16.05■□□□□ 0.16
VHL-203ENST00000477538 ARHGEF17Q96PE2 2063 aaPredicted RBP16.04■□□□□ 0.16
VHL-203ENST00000477538 FAM159BA6NKW6 160 aa16.04■□□□□ 0.16
VHL-203ENST00000477538 C1QAP02745 245 aa16.04■□□□□ 0.16
VHL-203ENST00000477538 ITPKAP23677 461 aa16.04■□□□□ 0.16
VHL-203ENST00000477538 ACRV1P26436 265 aa16.04■□□□□ 0.16
VHL-203ENST00000477538 PMLP29590 882 aa16.04■□□□□ 0.16
VHL-203ENST00000477538 PPARGP37231 505 aaPredicted RBP16.04■□□□□ 0.16
VHL-203ENST00000477538 TTPAP49638 278 aa16.04■□□□□ 0.16
VHL-203ENST00000477538 PFN3P60673 137 aa16.04■□□□□ 0.16
VHL-203ENST00000477538 RACK1P63244 317 aaKnown RBP16.04■□□□□ 0.16
VHL-203ENST00000477538 CTBP1Q13363 440 aa16.04■□□□□ 0.16
VHL-203ENST00000477538 SLC29A2Q14542 456 aa16.04■□□□□ 0.16
VHL-203ENST00000477538 EFTUD2Q15029 972 aaKnown RBP eCLIP16.04■□□□□ 0.16
VHL-203ENST00000477538 DBN1Q16643 649 aa16.04■□□□□ 0.16
VHL-203ENST00000477538 TYSND1Q2T9J0 566 aa16.04■□□□□ 0.16
VHL-203ENST00000477538 KBTBD12Q3ZCT8 623 aa16.04■□□□□ 0.16
VHL-203ENST00000477538 LDLRAP1Q5SW96 308 aa16.04■□□□□ 0.16
VHL-203ENST00000477538 TEDDM1Q5T9Z0 273 aa16.04■□□□□ 0.16
VHL-203ENST00000477538 ABI3BPQ7Z7G0 1075 aa16.04■□□□□ 0.16
VHL-203ENST00000477538 LDB1Q86U70 411 aaPredicted RBP16.04■□□□□ 0.16
VHL-203ENST00000477538 TRIM74Q86UV6 250 aa16.04■□□□□ 0.16
VHL-203ENST00000477538 DENND6AQ8IWF6 608 aa16.04■□□□□ 0.16
VHL-203ENST00000477538 CTAGE3PQ8IX95 158 aa16.04■□□□□ 0.16
VHL-203ENST00000477538 PNPLA1Q8N8W4 532 aa16.04■□□□□ 0.16
VHL-203ENST00000477538 DDHD1Q8NEL9 900 aa16.04■□□□□ 0.16
VHL-203ENST00000477538 FAM174AQ8TBP5 190 aa16.04■□□□□ 0.16
VHL-203ENST00000477538 FUBP1Q96AE4 644 aaKnown RBP16.04■□□□□ 0.16
VHL-203ENST00000477538 COX14Q96I36 57 aa16.04■□□□□ 0.16
VHL-203ENST00000477538 CYTH2Q99418 400 aa16.04■□□□□ 0.16
VHL-203ENST00000477538 TM9SF3Q9HD45 589 aa16.04■□□□□ 0.16
VHL-203ENST00000477538 ARFGAP3Q9NP61 516 aa16.04■□□□□ 0.16
VHL-203ENST00000477538 ZDHHC3Q9NYG2 299 aa16.04■□□□□ 0.16
VHL-203ENST00000477538 SLC17A6Q9P2U8 582 aa16.04■□□□□ 0.16
VHL-203ENST00000477538 FBXO5Q9UKT4 447 aa16.04■□□□□ 0.16
VHL-203ENST00000477538 ANKRD12Q6UB98 2062 aa16.04■□□□□ 0.16
VHL-203ENST00000477538 ATXN2Q99700 1313 aaKnown RBP16.03■□□□□ 0.16
VHL-203ENST00000477538 CXorf49A8MYA2 514 aaPredicted RBP16.03■□□□□ 0.16
VHL-203ENST00000477538 CACNB4O00305 520 aaPredicted RBP16.03■□□□□ 0.16
VHL-203ENST00000477538 TOR1BO14657 336 aa16.03■□□□□ 0.16
VHL-203ENST00000477538 PFDN6O15212 129 aa16.03■□□□□ 0.16
VHL-203ENST00000477538 PIAS1O75925 651 aa16.03■□□□□ 0.16
VHL-203ENST00000477538 MYCLP1P12525 358 aaPredicted RBP16.03■□□□□ 0.16
VHL-203ENST00000477538 H2AFXP16104 143 aaPredicted RBP16.03■□□□□ 0.16
VHL-203ENST00000477538 CD38P28907 300 aa16.03■□□□□ 0.16
VHL-203ENST00000477538 AKT1P31749 480 aa16.03■□□□□ 0.16
VHL-203ENST00000477538 RABIFP47224 123 aa16.03■□□□□ 0.16
VHL-203ENST00000477538 KIAA1024LP59773 190 aa16.03■□□□□ 0.16
VHL-203ENST00000477538 YPEL5P62699 121 aa16.03■□□□□ 0.16
VHL-203ENST00000477538 NAB1Q13506 487 aa16.03■□□□□ 0.16
VHL-203ENST00000477538 ITIH4Q14624 930 aa16.03■□□□□ 0.16
VHL-203ENST00000477538 BEND6Q5SZJ8 279 aaPredicted RBP16.03■□□□□ 0.16
VHL-203ENST00000477538 Q6ZSR6 202 aa16.03■□□□□ 0.16
VHL-203ENST00000477538 MARK2Q7KZI7 788 aaKnown RBP16.03■□□□□ 0.16
VHL-203ENST00000477538 PPM1NQ8N819 430 aa16.03■□□□□ 0.16
VHL-203ENST00000477538 C2CD4AQ8NCU7 369 aaPredicted RBP16.03■□□□□ 0.16
VHL-203ENST00000477538 PRSS33Q8NF86 280 aa16.03■□□□□ 0.16
VHL-203ENST00000477538 OR13H1Q8NG92 308 aa16.03■□□□□ 0.16
VHL-203ENST00000477538 C1orf216Q8TAB5 229 aa16.03■□□□□ 0.16
VHL-203ENST00000477538 SCG3Q8WXD2 468 aaKnown RBP16.03■□□□□ 0.16
VHL-203ENST00000477538 TCF12Q99081 682 aa16.03■□□□□ 0.16
VHL-203ENST00000477538 COPS8Q99627 209 aa16.03■□□□□ 0.16
VHL-203ENST00000477538 LGR4Q9BXB1 951 aa16.03■□□□□ 0.16
VHL-203ENST00000477538 NSMCE4AQ9NXX6 385 aa16.03■□□□□ 0.16
VHL-203ENST00000477538 OAS3Q9Y6K5 1087 aaKnown RBP16.03■□□□□ 0.16
VHL-203ENST00000477538 IGLV3-16A0A075B6K0 115 aa16.02■□□□□ 0.16
VHL-203ENST00000477538 A0A1W2PR77 199 aa16.02■□□□□ 0.16
VHL-203ENST00000477538 BCAT2O15382 392 aaPredicted RBP16.02■□□□□ 0.16
VHL-203ENST00000477538 MTX2O75431 263 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms