RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 IL17RCQ8NAC3 791 aa4.12□□□□□ -1.75
UBR3-209ENST00000477461 ZCCHC10Q8TBK6 192 aa4.12□□□□□ -1.75
UBR3-209ENST00000477461 EYA3Q99504 573 aa4.12□□□□□ -1.75
UBR3-209ENST00000477461 GPR63Q9BZJ6 419 aa4.12□□□□□ -1.75
UBR3-209ENST00000477461 LRRC4Q9HBW1 653 aa4.12□□□□□ -1.75
UBR3-209ENST00000477461 GPR108Q9NPR9 543 aa4.12□□□□□ -1.75
UBR3-209ENST00000477461 GGA3Q9NZ52 723 aa4.12□□□□□ -1.75
UBR3-209ENST00000477461 CNPY2Q9Y2B0 182 aa4.12□□□□□ -1.75
UBR3-209ENST00000477461 PAM16Q9Y3D7 125 aa4.12□□□□□ -1.75
UBR3-209ENST00000477461 ATP6V0A2Q9Y487 856 aa4.12□□□□□ -1.75
UBR3-209ENST00000477461 MYH13Q9UKX3 1938 aa4.12□□□□□ -1.75
UBR3-209ENST00000477461 LRP5O75197 1615 aa4.12□□□□□ -1.75
UBR3-209ENST00000477461 LRRC37AA6NMS7 1700 aa4.12□□□□□ -1.75
UBR3-209ENST00000477461 A0A1B0GUL6 1792 aa4.12□□□□□ -1.75
UBR3-209ENST00000477461 ARFGEF1Q9Y6D6 1849 aa4.11□□□□□ -1.75
UBR3-209ENST00000477461 BRCA1P38398 1863 aaKnown RBP4.11□□□□□ -1.75
UBR3-209ENST00000477461 CHD4Q14839 1912 aa4.11□□□□□ -1.75
UBR3-209ENST00000477461 AK9Q5TCS8 1911 aa4.11□□□□□ -1.75
UBR3-209ENST00000477461 HNRNPCL2B2RXH8 293 aa4.11□□□□□ -1.75
UBR3-209ENST00000477461 FRAT2O75474 233 aaPredicted RBP4.11□□□□□ -1.75
UBR3-209ENST00000477461 TFPIP10646 304 aa4.11□□□□□ -1.75
UBR3-209ENST00000477461 MX1P20591 662 aa4.11□□□□□ -1.75
UBR3-209ENST00000477461 FMO4P31512 558 aa4.11□□□□□ -1.75
UBR3-209ENST00000477461 PIGAP37287 484 aa4.11□□□□□ -1.75
UBR3-209ENST00000477461 RBBP5Q15291 538 aaKnown RBP4.11□□□□□ -1.75
UBR3-209ENST00000477461 BAK1Q16611 211 aa4.11□□□□□ -1.75
UBR3-209ENST00000477461 NAPEPLDQ6IQ20 393 aa4.11□□□□□ -1.75
UBR3-209ENST00000477461 C17orf99Q6UX52 265 aa4.11□□□□□ -1.75
UBR3-209ENST00000477461 UNQ6126/PRO20091Q6UXV3 157 aa4.11□□□□□ -1.75
UBR3-209ENST00000477461 SMIM29Q86T20 159 aa4.11□□□□□ -1.75
UBR3-209ENST00000477461 LURAP1LQ8IV03 231 aa4.11□□□□□ -1.75
UBR3-209ENST00000477461 DCUN1D3Q8IWE4 304 aa4.11□□□□□ -1.75
UBR3-209ENST00000477461 NAGSQ8N159 534 aa4.11□□□□□ -1.75
UBR3-209ENST00000477461 AADATQ8N5Z0 425 aa4.11□□□□□ -1.75
UBR3-209ENST00000477461 SECTM1Q8WVN6 248 aa4.11□□□□□ -1.75
UBR3-209ENST00000477461 CNOT9Q92600 299 aaKnown RBP4.11□□□□□ -1.75
UBR3-209ENST00000477461 OR1F2PQ96R84 312 aa4.11□□□□□ -1.75
UBR3-209ENST00000477461 SYT17Q9BSW7 474 aa4.11□□□□□ -1.75
UBR3-209ENST00000477461 FUZQ9BT04 418 aa4.11□□□□□ -1.75
UBR3-209ENST00000477461 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.11□□□□□ -1.75
UBR3-209ENST00000477461 LMAN2LQ9H0V9 348 aa4.11□□□□□ -1.75
UBR3-209ENST00000477461 ENTPD7Q9NQZ7 604 aa4.11□□□□□ -1.75
UBR3-209ENST00000477461 BEX4Q9NWD9 120 aaPredicted RBP4.11□□□□□ -1.75
UBR3-209ENST00000477461 PPP1R14DQ9NXH3 145 aa4.11□□□□□ -1.75
UBR3-209ENST00000477461 ALKBH4Q9NXW9 302 aa4.11□□□□□ -1.75
UBR3-209ENST00000477461 HCN3Q9P1Z3 774 aa4.11□□□□□ -1.75
UBR3-209ENST00000477461 SLC25A10Q9UBX3 287 aaPredicted RBP4.11□□□□□ -1.75
UBR3-209ENST00000477461 CNOT7Q9UIV1 285 aaKnown RBP4.11□□□□□ -1.75
UBR3-209ENST00000477461 TBX20Q9UMR3 447 aa4.11□□□□□ -1.75
UBR3-209ENST00000477461 ARAP2Q8WZ64 1704 aa4.11□□□□□ -1.75
UBR3-209ENST00000477461 KIAA1551Q9HCM1 1747 aa4.11□□□□□ -1.75
UBR3-209ENST00000477461 TTC41PQ6P2S7 1318 aa4.11□□□□□ -1.75
UBR3-209ENST00000477461 ZNF609O15014 1411 aa4.11□□□□□ -1.75
UBR3-209ENST00000477461 COL4A1P02462 1669 aa4.1□□□□□ -1.75
UBR3-209ENST00000477461 CCDC88AQ3V6T2 1871 aa4.1□□□□□ -1.75
UBR3-209ENST00000477461 TEX22C9J3V5 150 aa4.1□□□□□ -1.75
UBR3-209ENST00000477461 PPIP5K2O43314 1243 aa4.1□□□□□ -1.75
UBR3-209ENST00000477461 KDM4BO94953 1096 aa4.1□□□□□ -1.75
UBR3-209ENST00000477461 CLDN14O95500 239 aa4.1□□□□□ -1.75
UBR3-209ENST00000477461 PMS2P2O95744 297 aa4.1□□□□□ -1.75
UBR3-209ENST00000477461 ADAP00813 363 aa4.1□□□□□ -1.75
UBR3-209ENST00000477461 POLBP06746 335 aa4.1□□□□□ -1.75
UBR3-209ENST00000477461 UQCRFS1P1P0C7P4 283 aa4.1□□□□□ -1.75
UBR3-209ENST00000477461 DGKAP23743 735 aa4.1□□□□□ -1.75
UBR3-209ENST00000477461 ADORA1P30542 326 aa4.1□□□□□ -1.75
UBR3-209ENST00000477461 PGM1P36871 562 aa4.1□□□□□ -1.75
UBR3-209ENST00000477461 ZNF132P52740 706 aa4.1□□□□□ -1.75
UBR3-209ENST00000477461 ARSFP54793 590 aa4.1□□□□□ -1.75
UBR3-209ENST00000477461 TIMM10P62072 90 aa4.1□□□□□ -1.75
UBR3-209ENST00000477461 SLC18A2Q05940 514 aa4.1□□□□□ -1.75
UBR3-209ENST00000477461 FAM27E3Q08E93 113 aa4.1□□□□□ -1.75
UBR3-209ENST00000477461 CAMK1Q14012 370 aa4.1□□□□□ -1.75
UBR3-209ENST00000477461 RBM39Q14498 530 aaKnown RBP4.1□□□□□ -1.75
UBR3-209ENST00000477461 ALFQ53S48 1182 aa4.1□□□□□ -1.75
UBR3-209ENST00000477461 CEP85LQ5SZL2 805 aa4.1□□□□□ -1.75
UBR3-209ENST00000477461 INTS11Q5TA45 600 aaKnown RBP4.1□□□□□ -1.75
UBR3-209ENST00000477461 OLFM4Q6UX06 510 aa4.1□□□□□ -1.75
UBR3-209ENST00000477461 GDPD4Q6W3E5 623 aa4.1□□□□□ -1.75
UBR3-209ENST00000477461 PRSS45Q7RTY3 260 aa4.1□□□□□ -1.75
UBR3-209ENST00000477461 CCDC105Q8IYK2 499 aa4.1□□□□□ -1.75
UBR3-209ENST00000477461 MCPH1Q8NEM0 835 aa4.1□□□□□ -1.75
UBR3-209ENST00000477461 TNIP2Q8NFZ5 429 aa4.1□□□□□ -1.75
UBR3-209ENST00000477461 ARRDC2Q8TBH0 407 aa4.1□□□□□ -1.75
UBR3-209ENST00000477461 TBC1D16Q8TBP0 767 aa4.1□□□□□ -1.75
UBR3-209ENST00000477461 NOC3LQ8WTT2 800 aaKnown RBP4.1□□□□□ -1.75
UBR3-209ENST00000477461 HSPH1Q92598 858 aa4.1□□□□□ -1.75
UBR3-209ENST00000477461 HTRA1Q92743 480 aa4.1□□□□□ -1.75
UBR3-209ENST00000477461 STAMQ92783 540 aa4.1□□□□□ -1.75
UBR3-209ENST00000477461 EPHX3Q9H6B9 360 aa4.1□□□□□ -1.75
UBR3-209ENST00000477461 EVA1AQ9H8M9 152 aa4.1□□□□□ -1.75
UBR3-209ENST00000477461 ECHDC1Q9NTX5 307 aa4.1□□□□□ -1.75
UBR3-209ENST00000477461 SLC9A2Q9UBY0 812 aa4.1□□□□□ -1.75
UBR3-209ENST00000477461 DBNLQ9UJU6 430 aaKnown RBP4.1□□□□□ -1.75
UBR3-209ENST00000477461 KCNS2Q9ULS6 477 aa4.1□□□□□ -1.75
UBR3-209ENST00000477461 TMEM98Q9Y2Y6 226 aa4.1□□□□□ -1.75
UBR3-209ENST00000477461 MED23Q9ULK4 1368 aa4.1□□□□□ -1.75
UBR3-209ENST00000477461 FER1L6Q2WGJ9 1857 aa4.09□□□□□ -1.75
UBR3-209ENST00000477461 SNAP23O00161 211 aa4.09□□□□□ -1.75
UBR3-209ENST00000477461 EBAG9O00559 213 aa4.09□□□□□ -1.75
UBR3-209ENST00000477461 PER2O15055 1255 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms