RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 A6NCN8 305 aa11.53□□□□□ -0.56
VARS2-208ENST00000477052 C3orf70A6NLC5 250 aaPredicted RBP11.53□□□□□ -0.56
VARS2-208ENST00000477052 ANKRD66B4E2M5 251 aa11.53□□□□□ -0.56
VARS2-208ENST00000477052 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.53□□□□□ -0.56
VARS2-208ENST00000477052 AURKAO14965 403 aa11.53□□□□□ -0.56
VARS2-208ENST00000477052 NKX2-8O15522 239 aa11.53□□□□□ -0.56
VARS2-208ENST00000477052 ZW10O43264 779 aa11.53□□□□□ -0.56
VARS2-208ENST00000477052 GRID2O43424 1007 aa11.53□□□□□ -0.56
VARS2-208ENST00000477052 RAD1O60671 282 aa11.53□□□□□ -0.56
VARS2-208ENST00000477052 WISP1O95388 367 aa11.53□□□□□ -0.56
VARS2-208ENST00000477052 ITGB2P05107 769 aa11.53□□□□□ -0.56
VARS2-208ENST00000477052 KRT7P08729 469 aa11.53□□□□□ -0.56
VARS2-208ENST00000477052 H2AFZP0C0S5 128 aa11.53□□□□□ -0.56
VARS2-208ENST00000477052 PRKAR1AP10644 381 aa11.53□□□□□ -0.56
VARS2-208ENST00000477052 TYRP1P17643 537 aa11.53□□□□□ -0.56
VARS2-208ENST00000477052 CA4P22748 312 aa11.53□□□□□ -0.56
VARS2-208ENST00000477052 CD82P27701 267 aa11.53□□□□□ -0.56
VARS2-208ENST00000477052 FASLGP48023 281 aa11.53□□□□□ -0.56
VARS2-208ENST00000477052 ATP1A2P50993 1020 aa11.53□□□□□ -0.56
VARS2-208ENST00000477052 GFERP55789 205 aa11.53□□□□□ -0.56
VARS2-208ENST00000477052 GPLD1P80108 840 aa11.53□□□□□ -0.56
VARS2-208ENST00000477052 KCNC4Q03721 635 aa11.53□□□□□ -0.56
VARS2-208ENST00000477052 SQSTM1Q13501 440 aa11.53□□□□□ -0.56
VARS2-208ENST00000477052 LRP8Q14114 963 aa11.53□□□□□ -0.56
VARS2-208ENST00000477052 NOMO1Q15155 1222 aa11.53□□□□□ -0.56
VARS2-208ENST00000477052 SEPT7Q16181 437 aaKnown RBP11.53□□□□□ -0.56
VARS2-208ENST00000477052 KHDC1Q4VXA5 237 aaKnown RBP11.53□□□□□ -0.56
VARS2-208ENST00000477052 DCAF12Q5T6F0 453 aa11.53□□□□□ -0.56
VARS2-208ENST00000477052 ATP1A1-AS1Q5TC04 95 aa11.53□□□□□ -0.56
VARS2-208ENST00000477052 H2AFVQ71UI9 128 aa11.53□□□□□ -0.56
VARS2-208ENST00000477052 TIPARPQ7Z3E1 657 aaKnown RBP11.53□□□□□ -0.56
VARS2-208ENST00000477052 NLRP8Q86W28 1048 aa11.53□□□□□ -0.56
VARS2-208ENST00000477052 MAP7D3Q8IWC1 876 aa11.53□□□□□ -0.56
VARS2-208ENST00000477052 SLC35G2Q8TBE7 412 aa11.53□□□□□ -0.56
VARS2-208ENST00000477052 CCHCR1Q8TD31 782 aa11.53□□□□□ -0.56
VARS2-208ENST00000477052 FATE1Q969F0 183 aa11.53□□□□□ -0.56
VARS2-208ENST00000477052 RNF25Q96BH1 459 aaPredicted RBP11.53□□□□□ -0.56
VARS2-208ENST00000477052 HDAC11Q96DB2 347 aa11.53□□□□□ -0.56
VARS2-208ENST00000477052 RTP4Q96DX8 246 aa11.53□□□□□ -0.56
VARS2-208ENST00000477052 TRIB3Q96RU7 358 aa11.53□□□□□ -0.56
VARS2-208ENST00000477052 LYSMD1Q96S90 227 aa11.53□□□□□ -0.56
VARS2-208ENST00000477052 CHP1Q99653 195 aa11.53□□□□□ -0.56
VARS2-208ENST00000477052 CLMPQ9H6B4 373 aa11.53□□□□□ -0.56
VARS2-208ENST00000477052 BPIFA1Q9NP55 256 aa11.53□□□□□ -0.56
VARS2-208ENST00000477052 KLC4Q9NSK0 619 aa11.53□□□□□ -0.56
VARS2-208ENST00000477052 UBP1Q9NZI7 540 aa11.53□□□□□ -0.56
VARS2-208ENST00000477052 PKD2L2Q9NZM6 624 aa11.53□□□□□ -0.56
VARS2-208ENST00000477052 VPS18Q9P253 973 aa11.53□□□□□ -0.56
VARS2-208ENST00000477052 UVRAGQ9P2Y5 699 aa11.53□□□□□ -0.56
VARS2-208ENST00000477052 SAE1Q9UBE0 346 aaPredicted RBP11.53□□□□□ -0.56
VARS2-208ENST00000477052 TRIM10Q9UDY6 481 aa11.53□□□□□ -0.56
VARS2-208ENST00000477052 DNAJC16Q9Y2G8 782 aa11.53□□□□□ -0.56
VARS2-208ENST00000477052 PCDHGA3Q9Y5H0 932 aa11.53□□□□□ -0.56
VARS2-208ENST00000477052 SPO11Q9Y5K1 396 aa11.53□□□□□ -0.56
VARS2-208ENST00000477052 TLN1Q9Y490 2541 aaKnown RBP11.52□□□□□ -0.56
VARS2-208ENST00000477052 LOC101059948A0A1B0GTJ6 334 aa11.52□□□□□ -0.57
VARS2-208ENST00000477052 NUAK1O60285 661 aa11.52□□□□□ -0.57
VARS2-208ENST00000477052 SLC25A14O95258 325 aaPredicted RBP11.52□□□□□ -0.57
VARS2-208ENST00000477052 MT-CYBP00156 380 aaPredicted RBP11.52□□□□□ -0.57
VARS2-208ENST00000477052 KRT1P04264 644 aa11.52□□□□□ -0.57
VARS2-208ENST00000477052 PYGLP06737 847 aa11.52□□□□□ -0.57
VARS2-208ENST00000477052 MX2P20592 715 aa11.52□□□□□ -0.57
VARS2-208ENST00000477052 CES1P23141 567 aa11.52□□□□□ -0.57
VARS2-208ENST00000477052 RPL26P61254 145 aaKnown RBP11.52□□□□□ -0.57
VARS2-208ENST00000477052 IFI35P80217 286 aaPredicted RBP11.52□□□□□ -0.57
VARS2-208ENST00000477052 PPIDQ08752 370 aaKnown RBP11.52□□□□□ -0.57
VARS2-208ENST00000477052 PEX6Q13608 980 aa11.52□□□□□ -0.57
VARS2-208ENST00000477052 SLC18A3Q16572 532 aa11.52□□□□□ -0.57
VARS2-208ENST00000477052 CLPPQ16740 277 aaPredicted RBP11.52□□□□□ -0.57
VARS2-208ENST00000477052 ASTE1Q2TB18 679 aaPredicted RBP11.52□□□□□ -0.57
VARS2-208ENST00000477052 ARHGAP22Q7Z5H3 698 aa11.52□□□□□ -0.57
VARS2-208ENST00000477052 ADGRG6Q86SQ4 1221 aa11.52□□□□□ -0.57
VARS2-208ENST00000477052 RFX6Q8HWS3 928 aa11.52□□□□□ -0.57
VARS2-208ENST00000477052 CCDC112Q8NEF3 446 aa11.52□□□□□ -0.57
VARS2-208ENST00000477052 ZNF830Q96NB3 372 aaPredicted RBP11.52□□□□□ -0.57
VARS2-208ENST00000477052 PLEKHG4BQ96PX9 1271 aa11.52□□□□□ -0.57
VARS2-208ENST00000477052 DDA1Q9BW61 102 aa11.52□□□□□ -0.57
VARS2-208ENST00000477052 ZFYVE1Q9HBF4 777 aa11.52□□□□□ -0.57
VARS2-208ENST00000477052 SARS2Q9NP81 518 aaKnown RBP11.52□□□□□ -0.57
VARS2-208ENST00000477052 OGFRQ9NZT2 677 aa11.52□□□□□ -0.57
VARS2-208ENST00000477052 PDP2Q9P2J9 529 aa11.52□□□□□ -0.57
VARS2-208ENST00000477052 CPNE7Q9UBL6 633 aa11.52□□□□□ -0.57
VARS2-208ENST00000477052 IL17BQ9UHF5 180 aa11.52□□□□□ -0.57
VARS2-208ENST00000477052 AMACRQ9UHK6 382 aa11.52□□□□□ -0.57
VARS2-208ENST00000477052 PILRAQ9UKJ1 303 aa11.52□□□□□ -0.57
VARS2-208ENST00000477052 TMPRSS11EQ9UL52 423 aa11.52□□□□□ -0.57
VARS2-208ENST00000477052 RPL26L1Q9UNX3 145 aaKnown RBP11.52□□□□□ -0.57
VARS2-208ENST00000477052 SLC30A1Q9Y6M5 507 aa11.52□□□□□ -0.57
VARS2-208ENST00000477052 BSNQ9UPA5 3926 aa11.51□□□□□ -0.57
VARS2-208ENST00000477052 B4E171 279 aa11.51□□□□□ -0.57
VARS2-208ENST00000477052 APOL1O14791 398 aa11.51□□□□□ -0.57
VARS2-208ENST00000477052 GPR39O43194 453 aa11.51□□□□□ -0.57
VARS2-208ENST00000477052 PMPCBO75439 489 aa11.51□□□□□ -0.57
VARS2-208ENST00000477052 F3P13726 295 aa11.51□□□□□ -0.57
VARS2-208ENST00000477052 BPIP17213 487 aa11.51□□□□□ -0.57
VARS2-208ENST00000477052 RPL10P27635 214 aaKnown RBP11.51□□□□□ -0.57
VARS2-208ENST00000477052 TSPAN7P41732 249 aa11.51□□□□□ -0.57
VARS2-208ENST00000477052 LEPRP48357 1165 aaKnown RBP11.51□□□□□ -0.57
VARS2-208ENST00000477052 SEPHS1P49903 392 aa11.51□□□□□ -0.57
VARS2-208ENST00000477052 DRG2P55039 364 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms