RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 FAM136AQ96C01 138 aa28.62■■■□□ 2.17
VEGFA-211ENST00000476772 MAGEB18Q96M61 343 aa28.62■■■□□ 2.17
VEGFA-211ENST00000476772 RIOK2Q9BVS4 552 aaKnown RBP28.62■■■□□ 2.17
VEGFA-211ENST00000476772 SLC6A17Q9H1V8 727 aa28.62■■■□□ 2.17
VEGFA-211ENST00000476772 ABCG8Q9H221 673 aa28.62■■■□□ 2.17
VEGFA-211ENST00000476772 FBRSQ9HAH7 460 aa28.62■■■□□ 2.17
VEGFA-211ENST00000476772 CD248Q9HCU0 757 aa28.62■■■□□ 2.17
VEGFA-211ENST00000476772 SERGEFQ9UGK8 458 aa28.62■■■□□ 2.17
VEGFA-211ENST00000476772 MED16Q9Y2X0 877 aa28.62■■■□□ 2.17
VEGFA-211ENST00000476772 A0A1W2PP55 124 aa28.61■■■□□ 2.17
VEGFA-211ENST00000476772 PRMT5O14744 637 aaPredicted RBP28.61■■■□□ 2.17
VEGFA-211ENST00000476772 WNT9AO14904 365 aa28.61■■■□□ 2.17
VEGFA-211ENST00000476772 PLIN3O60664 434 aa28.61■■■□□ 2.17
VEGFA-211ENST00000476772 WISP3O95389 354 aaPredicted RBP28.61■■■□□ 2.17
VEGFA-211ENST00000476772 COL6A2P12110 1019 aa28.61■■■□□ 2.17
VEGFA-211ENST00000476772 ZNF7P17097 686 aaPredicted RBP28.61■■■□□ 2.17
VEGFA-211ENST00000476772 SERPINB4P48594 390 aa28.61■■■□□ 2.17
VEGFA-211ENST00000476772 SEC24CP53992 1094 aa28.61■■■□□ 2.17
VEGFA-211ENST00000476772 DLG1Q12959 904 aa28.61■■■□□ 2.17
VEGFA-211ENST00000476772 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP28.61■■■□□ 2.17
VEGFA-211ENST00000476772 MAFAQ8NHW3 353 aaPredicted RBP28.61■■■□□ 2.17
VEGFA-211ENST00000476772 TSNARE1Q96NA8 513 aa28.61■■■□□ 2.17
VEGFA-211ENST00000476772 TMPRSS11EQ9UL52 423 aa28.61■■■□□ 2.17
VEGFA-211ENST00000476772 MMP20O60882 483 aa28.61■■■□□ 2.17
VEGFA-211ENST00000476772 ESR1P03372 595 aa28.61■■■□□ 2.17
VEGFA-211ENST00000476772 PROCP04070 461 aa28.61■■■□□ 2.17
VEGFA-211ENST00000476772 C6P13671 934 aa28.61■■■□□ 2.17
VEGFA-211ENST00000476772 TMEM207Q6UWW9 146 aa28.61■■■□□ 2.17
VEGFA-211ENST00000476772 TBC1D1Q86TI0 1168 aaPredicted RBP28.61■■■□□ 2.17
VEGFA-211ENST00000476772 ADHFE1Q8IWW8 467 aa28.61■■■□□ 2.17
VEGFA-211ENST00000476772 NRSN1Q8IZ57 195 aa28.61■■■□□ 2.17
VEGFA-211ENST00000476772 SPATA6LQ8N4H0 392 aa28.61■■■□□ 2.17
VEGFA-211ENST00000476772 ULK4Q96C45 1275 aa28.61■■■□□ 2.17
VEGFA-211ENST00000476772 DTD2Q96FN9 168 aa28.61■■■□□ 2.17
VEGFA-211ENST00000476772 CDH19Q9H159 772 aa28.61■■■□□ 2.17
VEGFA-211ENST00000476772 CA14Q9ULX7 337 aa28.61■■■□□ 2.17
VEGFA-211ENST00000476772 RUVBL2Q9Y230 463 aaKnown RBP28.61■■■□□ 2.17
VEGFA-211ENST00000476772 NIPSNAP2O75323 286 aa28.6■■■□□ 2.17
VEGFA-211ENST00000476772 TAS2R38P59533 333 aa28.6■■■□□ 2.17
VEGFA-211ENST00000476772 PDK4Q16654 411 aa28.6■■■□□ 2.17
VEGFA-211ENST00000476772 ZNF284Q2VY69 593 aa28.6■■■□□ 2.17
VEGFA-211ENST00000476772 TMPRSS6Q8IU80 811 aa28.6■■■□□ 2.17
VEGFA-211ENST00000476772 TRAM1L1Q8N609 369 aa28.6■■■□□ 2.17
VEGFA-211ENST00000476772 CCDC63Q8NA47 563 aa28.6■■■□□ 2.17
VEGFA-211ENST00000476772 DTX3LQ8TDB6 740 aa28.6■■■□□ 2.17
VEGFA-211ENST00000476772 CXorf40AQ8TE69 158 aa28.6■■■□□ 2.17
VEGFA-211ENST00000476772 NAT14Q8WUY8 206 aa28.6■■■□□ 2.17
VEGFA-211ENST00000476772 NXNL1Q96CM4 212 aa28.6■■■□□ 2.17
VEGFA-211ENST00000476772 CLPBQ9H078 707 aa28.6■■■□□ 2.17
VEGFA-211ENST00000476772 ZDHHC3Q9NYG2 299 aa28.6■■■□□ 2.17
VEGFA-211ENST00000476772 TAS2R13Q9NYV9 303 aa28.6■■■□□ 2.17
VEGFA-211ENST00000476772 PCDHB1Q9Y5F3 818 aa28.6■■■□□ 2.17
VEGFA-211ENST00000476772 COMMD10Q9Y6G5 202 aa28.6■■■□□ 2.17
VEGFA-211ENST00000476772 MAN2B1O00754 1011 aa28.59■■■□□ 2.17
VEGFA-211ENST00000476772 KLHL2O95198 593 aa28.59■■■□□ 2.17
VEGFA-211ENST00000476772 RPS3P23396 243 aaKnown RBP eCLIP28.59■■■□□ 2.174e-8■□□□□ 10.7
VEGFA-211ENST00000476772 ZP2Q05996 745 aa28.59■■■□□ 2.17
VEGFA-211ENST00000476772 LCA5Q86VQ0 697 aa28.59■■■□□ 2.17
VEGFA-211ENST00000476772 RAVER1Q8IY67 606 aaKnown RBP28.59■■■□□ 2.17
VEGFA-211ENST00000476772 AP2M1Q96CW1 435 aa28.59■■■□□ 2.17
VEGFA-211ENST00000476772 ZSCAN5AQ9BUG6 496 aa28.59■■■□□ 2.17
VEGFA-211ENST00000476772 EPN3Q9H201 632 aa28.59■■■□□ 2.17
VEGFA-211ENST00000476772 RABEP2Q9H5N1 569 aa28.59■■■□□ 2.17
VEGFA-211ENST00000476772 POPDC3Q9HBV1 291 aa28.59■■■□□ 2.17
VEGFA-211ENST00000476772 IGSF5Q9NSI5 407 aa28.59■■■□□ 2.17
VEGFA-211ENST00000476772 SMOXQ9NWM0 555 aa28.59■■■□□ 2.17
VEGFA-211ENST00000476772 PRSS21Q9Y6M0 314 aa28.59■■■□□ 2.17
VEGFA-211ENST00000476772 FADS2P1A8MWK0 482 aa28.58■■■□□ 2.17
VEGFA-211ENST00000476772 RNASEH2AO75792 299 aaKnown RBP28.58■■■□□ 2.17
VEGFA-211ENST00000476772 RECQL5O94762 991 aaPredicted RBP28.58■■■□□ 2.17
VEGFA-211ENST00000476772 PDAP1Q13442 181 aaKnown RBP28.58■■■□□ 2.17
VEGFA-211ENST00000476772 CSHL1Q14406 222 aa28.58■■■□□ 2.17
VEGFA-211ENST00000476772 ITIH4Q14624 930 aa28.58■■■□□ 2.17
VEGFA-211ENST00000476772 CCDC153Q494R4 210 aa28.58■■■□□ 2.17
VEGFA-211ENST00000476772 SETMARQ53H47 684 aaPredicted RBP28.58■■■□□ 2.17
VEGFA-211ENST00000476772 EOGTQ5NDL2 527 aa28.58■■■□□ 2.17
VEGFA-211ENST00000476772 CYP2U1Q7Z449 544 aa28.58■■■□□ 2.17
VEGFA-211ENST00000476772 ANKRD49Q8WVL7 239 aa28.58■■■□□ 2.17
VEGFA-211ENST00000476772 GPR78Q96P69 363 aa28.58■■■□□ 2.17
VEGFA-211ENST00000476772 GPR21Q99679 349 aa28.58■■■□□ 2.17
VEGFA-211ENST00000476772 MECRQ9BV79 373 aa28.58■■■□□ 2.17
VEGFA-211ENST00000476772 UNKQ9C0B0 810 aaKnown RBP28.58■■■□□ 2.17
VEGFA-211ENST00000476772 NMRAL1Q9HBL8 299 aa28.58■■■□□ 2.17
VEGFA-211ENST00000476772 GALPQ9UBC7 116 aa28.58■■■□□ 2.17
VEGFA-211ENST00000476772 GMNCA6NCL1 334 aa28.58■■■□□ 2.16
VEGFA-211ENST00000476772 AP1G1O43747 822 aa28.58■■■□□ 2.16
VEGFA-211ENST00000476772 LZTS3O60299 673 aaPredicted RBP28.58■■■□□ 2.16
VEGFA-211ENST00000476772 DNTTP04053 509 aa28.58■■■□□ 2.16
VEGFA-211ENST00000476772 CCDC166P0CW27 439 aa28.58■■■□□ 2.16
VEGFA-211ENST00000476772 GLRBP48167 497 aa28.58■■■□□ 2.16
VEGFA-211ENST00000476772 HSF5Q4G112 596 aaPredicted RBP28.58■■■□□ 2.16
VEGFA-211ENST00000476772 GPRC6AQ5T6X5 926 aa28.58■■■□□ 2.16
VEGFA-211ENST00000476772 ZNF852Q6ZMS4 543 aa28.58■■■□□ 2.16
VEGFA-211ENST00000476772 CCDC91Q7Z6B0 441 aa28.58■■■□□ 2.16
VEGFA-211ENST00000476772 NUS1Q96E22 293 aa28.58■■■□□ 2.16
VEGFA-211ENST00000476772 UBXN10Q96LJ8 280 aa28.58■■■□□ 2.16
VEGFA-211ENST00000476772 ZNF317Q96PQ6 595 aaPredicted RBP28.58■■■□□ 2.16
VEGFA-211ENST00000476772 COPS8Q99627 209 aa28.58■■■□□ 2.16
VEGFA-211ENST00000476772 SRRM3A6NNA2 597 aaPredicted RBP28.57■■■□□ 2.16
VEGFA-211ENST00000476772 IQCF5A8MTL0 148 aa28.57■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms