RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 PJA1Q8NG27 643 aa10.91□□□□□ -0.66
VAPB-204ENST00000475243 ADAMTS15Q8TE58 950 aa10.91□□□□□ -0.66
VAPB-204ENST00000475243 C1GALT1C1Q96EU7 318 aa10.91□□□□□ -0.66
VAPB-204ENST00000475243 SLC28A3Q9HAS3 691 aa10.91□□□□□ -0.66
VAPB-204ENST00000475243 LRTM1Q9HBL6 345 aa10.91□□□□□ -0.66
VAPB-204ENST00000475243 CARNS1A5YM72 827 aa10.91□□□□□ -0.66
VAPB-204ENST00000475243 OR6C75A6NL08 312 aa10.91□□□□□ -0.66
VAPB-204ENST00000475243 STX16-NPEPL1H3BU86 382 aa10.91□□□□□ -0.66
VAPB-204ENST00000475243 STX16O14662 325 aa10.91□□□□□ -0.66
VAPB-204ENST00000475243 HAT1O14929 419 aa10.91□□□□□ -0.66
VAPB-204ENST00000475243 TRIM3O75382 744 aaPredicted RBP10.91□□□□□ -0.66
VAPB-204ENST00000475243 ASGR1P07306 291 aa10.91□□□□□ -0.66
VAPB-204ENST00000475243 PIK3R6Q5UE93 754 aa10.91□□□□□ -0.66
VAPB-204ENST00000475243 ANKRD46Q86W74 232 aa10.91□□□□□ -0.66
VAPB-204ENST00000475243 TRPV3Q8NET8 790 aa10.91□□□□□ -0.66
VAPB-204ENST00000475243 BHLHE41Q9C0J9 482 aaPredicted RBP10.91□□□□□ -0.66
VAPB-204ENST00000475243 ACSS3Q9H6R3 686 aa10.91□□□□□ -0.66
VAPB-204ENST00000475243 SYNPO2Q9UMS6 1093 aa10.91□□□□□ -0.66
VAPB-204ENST00000475243 SMIM28A0A1B0GU29 152 aa10.91□□□□□ -0.66
VAPB-204ENST00000475243 A0A1W2PQ67 120 aa10.91□□□□□ -0.66
VAPB-204ENST00000475243 CPSF4LA6NMK7 179 aaKnown RBP10.91□□□□□ -0.66
VAPB-204ENST00000475243 BTBD19C9JJ37 291 aa10.91□□□□□ -0.66
VAPB-204ENST00000475243 SLC31A1O15431 190 aa10.91□□□□□ -0.66
VAPB-204ENST00000475243 C22orf31O95567 290 aa10.91□□□□□ -0.66
VAPB-204ENST00000475243 QPCTQ16769 361 aa10.91□□□□□ -0.66
VAPB-204ENST00000475243 STRADAQ7RTN6 431 aa10.91□□□□□ -0.66
VAPB-204ENST00000475243 TAF8Q7Z7C8 310 aa10.91□□□□□ -0.66
VAPB-204ENST00000475243 RDH11Q8TC12 318 aa10.91□□□□□ -0.66
VAPB-204ENST00000475243 GPR21Q99679 349 aa10.91□□□□□ -0.66
VAPB-204ENST00000475243 RHOJQ9H4E5 214 aa10.91□□□□□ -0.66
VAPB-204ENST00000475243 TFECO14948 347 aaPredicted RBP10.91□□□□□ -0.66
VAPB-204ENST00000475243 TNFRSF8P28908 595 aa10.91□□□□□ -0.66
VAPB-204ENST00000475243 ADRA1BP35368 520 aa10.91□□□□□ -0.66
VAPB-204ENST00000475243 CTSKP43235 329 aa10.91□□□□□ -0.66
VAPB-204ENST00000475243 STARP49675 285 aa10.91□□□□□ -0.66
VAPB-204ENST00000475243 BNC1Q01954 994 aa10.91□□□□□ -0.66
VAPB-204ENST00000475243 CHADLQ6NUI6 762 aa10.91□□□□□ -0.66
VAPB-204ENST00000475243 RTL4Q6ZR62 310 aa10.91□□□□□ -0.66
VAPB-204ENST00000475243 GALNTL5Q7Z4T8 443 aa10.91□□□□□ -0.66
VAPB-204ENST00000475243 OAFQ86UD1 273 aa10.91□□□□□ -0.66
VAPB-204ENST00000475243 CADM2Q8N3J6 435 aa10.91□□□□□ -0.66
VAPB-204ENST00000475243 SMG7Q92540 1137 aaKnown RBP10.91□□□□□ -0.66
VAPB-204ENST00000475243 ALG2Q9H553 416 aa10.91□□□□□ -0.66
VAPB-204ENST00000475243 NEK6Q9HC98 313 aa10.91□□□□□ -0.66
VAPB-204ENST00000475243 EXD2Q9NVH0 621 aa10.91□□□□□ -0.66
VAPB-204ENST00000475243 IKZF2Q9UKS7 526 aa10.91□□□□□ -0.66
VAPB-204ENST00000475243 CLDN11O75508 207 aa10.91□□□□□ -0.66
VAPB-204ENST00000475243 LRIG2O94898 1065 aa10.91□□□□□ -0.66
VAPB-204ENST00000475243 FGBP02675 491 aa10.91□□□□□ -0.66
VAPB-204ENST00000475243 YAP1P46937 504 aaKnown RBP10.91□□□□□ -0.66
VAPB-204ENST00000475243 ERVK-21P61565 698 aa10.91□□□□□ -0.66
VAPB-204ENST00000475243 ZNF460Q14592 562 aa10.91□□□□□ -0.66
VAPB-204ENST00000475243 VWA5B1Q5TIE3 1220 aa10.91□□□□□ -0.66
VAPB-204ENST00000475243 ZNF433Q8N7K0 673 aaPredicted RBP10.91□□□□□ -0.66
VAPB-204ENST00000475243 HMCESQ96FZ2 354 aa10.91□□□□□ -0.66
VAPB-204ENST00000475243 ART5Q96L15 291 aa10.91□□□□□ -0.66
VAPB-204ENST00000475243 SEMA3GQ9NS98 782 aa10.91□□□□□ -0.66
VAPB-204ENST00000475243 ARL5CA6NH57 179 aa10.9□□□□□ -0.66
VAPB-204ENST00000475243 CASKO14936 926 aa10.9□□□□□ -0.66
VAPB-204ENST00000475243 PGRMC2O15173 223 aa10.9□□□□□ -0.66
VAPB-204ENST00000475243 MT-CYBP00156 380 aaPredicted RBP10.9□□□□□ -0.66
VAPB-204ENST00000475243 RPL17P18621 184 aaKnown RBP10.9□□□□□ -0.66
VAPB-204ENST00000475243 POLR2JP52435 117 aaKnown RBP10.9□□□□□ -0.66
VAPB-204ENST00000475243 TBATAQ96M53 351 aa10.9□□□□□ -0.66
VAPB-204ENST00000475243 CHID1Q9BWS9 393 aa10.9□□□□□ -0.66
VAPB-204ENST00000475243 DUS2Q9NX74 493 aaKnown RBP10.9□□□□□ -0.66
VAPB-204ENST00000475243 FBXW2Q9UKT8 454 aa10.9□□□□□ -0.66
VAPB-204ENST00000475243 TCRBV7S2A1N4TA0A589 114 aa10.9□□□□□ -0.66
VAPB-204ENST00000475243 UBE2QL1A1L167 161 aa10.9□□□□□ -0.66
VAPB-204ENST00000475243 C9P02748 559 aa10.9□□□□□ -0.66
VAPB-204ENST00000475243 C4BPAP04003 597 aaKnown RBP10.9□□□□□ -0.66
VAPB-204ENST00000475243 GIMD1P0DJR0 217 aa10.9□□□□□ -0.66
VAPB-204ENST00000475243 BNIP2Q12982 314 aa10.9□□□□□ -0.66
VAPB-204ENST00000475243 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.9□□□□□ -0.66
VAPB-204ENST00000475243 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.9□□□□□ -0.66
VAPB-204ENST00000475243 SLC24A5Q71RS6 500 aa10.9□□□□□ -0.66
VAPB-204ENST00000475243 KLRG1Q96E93 195 aa10.9□□□□□ -0.66
VAPB-204ENST00000475243 COX4I2Q96KJ9 171 aa10.9□□□□□ -0.66
VAPB-204ENST00000475243 C5orf34Q96MH7 638 aa10.9□□□□□ -0.66
VAPB-204ENST00000475243 HTATIP2Q9BUP3 242 aa10.9□□□□□ -0.66
VAPB-204ENST00000475243 FAM192AQ9GZU8 254 aa10.9□□□□□ -0.66
VAPB-204ENST00000475243 DSN1Q9H410 356 aa10.9□□□□□ -0.66
VAPB-204ENST00000475243 MARCH7Q9H992 704 aa10.9□□□□□ -0.66
VAPB-204ENST00000475243 R3HDM2Q9Y2K5 976 aaKnown RBP10.9□□□□□ -0.66
VAPB-204ENST00000475243 RIMBP3CA6NJZ7 1639 aa10.9□□□□□ -0.66
VAPB-204ENST00000475243 RIMBP3BA6NNM3 1639 aa10.9□□□□□ -0.66
VAPB-204ENST00000475243 RIMBP3Q9UFD9 1639 aa10.9□□□□□ -0.66
VAPB-204ENST00000475243 FSBPO95073 299 aa10.9□□□□□ -0.66
VAPB-204ENST00000475243 PARP15Q460N3 678 aa10.9□□□□□ -0.66
VAPB-204ENST00000475243 ADCY4Q8NFM4 1077 aa10.9□□□□□ -0.66
VAPB-204ENST00000475243 OR7D4Q8NG98 312 aa10.9□□□□□ -0.66
VAPB-204ENST00000475243 ZCCHC10Q8TBK6 192 aa10.9□□□□□ -0.66
VAPB-204ENST00000475243 KCTD5Q9NXV2 234 aa10.9□□□□□ -0.66
VAPB-204ENST00000475243 FCF1Q9Y324 198 aaKnown RBP10.9□□□□□ -0.66
VAPB-204ENST00000475243 PRMT5O14744 637 aaPredicted RBP10.9□□□□□ -0.66
VAPB-204ENST00000475243 CES1P23141 567 aa10.9□□□□□ -0.66
VAPB-204ENST00000475243 QPRTQ15274 297 aa10.9□□□□□ -0.66
VAPB-204ENST00000475243 PRSS58Q8IYP2 241 aa10.9□□□□□ -0.66
VAPB-204ENST00000475243 SLC43A3Q8NBI5 491 aa10.9□□□□□ -0.66
VAPB-204ENST00000475243 AZIN2Q96A70 460 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms