RNA–Protein interactions for RNA: ENST00000474929.1

USP54-211, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 590 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-211ENST00000474929 STAP1Q9ULZ2 295 aa7.92□□□□□ -1.14
USP54-211ENST00000474929 BTRCQ9Y297 605 aa7.92□□□□□ -1.14
USP54-211ENST00000474929 DOCK4Q8N1I0 1966 aa7.91□□□□□ -1.14
USP54-211ENST00000474929 A0A1W2PQ67 120 aa7.91□□□□□ -1.14
USP54-211ENST00000474929 SIX3O95343 332 aaPredicted RBP7.91□□□□□ -1.14
USP54-211ENST00000474929 ITIH2P19823 946 aa7.91□□□□□ -1.14
USP54-211ENST00000474929 AGXTP21549 392 aa7.91□□□□□ -1.14
USP54-211ENST00000474929 RPL13P26373 211 aaKnown RBP7.91□□□□□ -1.14
USP54-211ENST00000474929 FOLR3P41439 243 aa7.91□□□□□ -1.14
USP54-211ENST00000474929 SNX16P57768 344 aa7.91□□□□□ -1.14
USP54-211ENST00000474929 PITX1P78337 314 aaPredicted RBP7.91□□□□□ -1.14
USP54-211ENST00000474929 ADCY2Q08462 1091 aa7.91□□□□□ -1.14
USP54-211ENST00000474929 RALGDSQ12967 914 aa7.91□□□□□ -1.14
USP54-211ENST00000474929 PLCL1Q15111 1095 aa7.91□□□□□ -1.14
USP54-211ENST00000474929 PYCR3Q53H96 274 aa7.91□□□□□ -1.14
USP54-211ENST00000474929 TMTC4Q5T4D3 741 aa7.91□□□□□ -1.14
USP54-211ENST00000474929 TMCO4Q5TGY1 634 aa7.91□□□□□ -1.14
USP54-211ENST00000474929 RAET1GQ6H3X3 334 aa7.91□□□□□ -1.14
USP54-211ENST00000474929 FAM198BQ6UWH4 519 aa7.91□□□□□ -1.14
USP54-211ENST00000474929 TMEM26Q6ZUK4 368 aa7.91□□□□□ -1.14
USP54-211ENST00000474929 ZNF683Q8IZ20 524 aa7.91□□□□□ -1.14
USP54-211ENST00000474929 MYRIPQ8NFW9 859 aa7.91□□□□□ -1.14
USP54-211ENST00000474929 CPLX3Q8WVH0 158 aa7.91□□□□□ -1.14
USP54-211ENST00000474929 CLIP3Q96DZ5 547 aa7.91□□□□□ -1.14
USP54-211ENST00000474929 ATP13A3Q9H7F0 1226 aa7.91□□□□□ -1.14
USP54-211ENST00000474929 ZNF395Q9H8N7 513 aaPredicted RBP7.91□□□□□ -1.14
USP54-211ENST00000474929 AKIRIN1Q9H9L7 192 aaPredicted RBP7.91□□□□□ -1.14
USP54-211ENST00000474929 SYTL2Q9HCH5 934 aa7.91□□□□□ -1.14
USP54-211ENST00000474929 KCND1Q9NSA2 647 aa7.91□□□□□ -1.14
USP54-211ENST00000474929 MPP6Q9NZW5 540 aa7.91□□□□□ -1.14
USP54-211ENST00000474929 FBXO2Q9UK22 296 aaPredicted RBP7.91□□□□□ -1.14
USP54-211ENST00000474929 MEMO1Q9Y316 297 aa7.91□□□□□ -1.14
USP54-211ENST00000474929 ST14Q9Y5Y6 855 aa7.91□□□□□ -1.14
USP54-211ENST00000474929 TRBV23OR9-2A0A075B6M9 112 aa7.9□□□□□ -1.14
USP54-211ENST00000474929 TRAV17A0A0B4J275 112 aa7.9□□□□□ -1.14
USP54-211ENST00000474929 DYTNA2CJ06 578 aa7.9□□□□□ -1.14
USP54-211ENST00000474929 E5RJQ4 531 aa7.9□□□□□ -1.14
USP54-211ENST00000474929 PSMD11O00231 422 aa7.9□□□□□ -1.14
USP54-211ENST00000474929 HTRA2O43464 458 aaPredicted RBP7.9□□□□□ -1.14
USP54-211ENST00000474929 MED7O43513 233 aa7.9□□□□□ -1.14
USP54-211ENST00000474929 RAMP2O60895 175 aa7.9□□□□□ -1.14
USP54-211ENST00000474929 GADD45BO75293 160 aaPredicted RBP7.9□□□□□ -1.14
USP54-211ENST00000474929 DAB1O75553 588 aa7.9□□□□□ -1.14
USP54-211ENST00000474929 PIGNO95427 931 aa7.9□□□□□ -1.14
USP54-211ENST00000474929 VIPP01282 170 aa7.9□□□□□ -1.14
USP54-211ENST00000474929 HBQ1P09105 142 aa7.9□□□□□ -1.14
USP54-211ENST00000474929 UGT1A4P22310 534 aa7.9□□□□□ -1.14
USP54-211ENST00000474929 CA5AP35218 305 aa7.9□□□□□ -1.14
USP54-211ENST00000474929 PSMC2P35998 433 aaKnown RBP7.9□□□□□ -1.14
USP54-211ENST00000474929 GPD2P43304 727 aa7.9□□□□□ -1.14
USP54-211ENST00000474929 UBE2IP63279 158 aaKnown RBP7.9□□□□□ -1.14
USP54-211ENST00000474929 HSD11B2P80365 405 aa7.9□□□□□ -1.14
USP54-211ENST00000474929 DMPKQ09013 629 aa7.9□□□□□ -1.14
USP54-211ENST00000474929 KCNAB1Q14722 419 aa7.9□□□□□ -1.14
USP54-211ENST00000474929 NFIL3Q16649 462 aa7.9□□□□□ -1.14
USP54-211ENST00000474929 ZFYVE27Q5T4F4 411 aa7.9□□□□□ -1.14
USP54-211ENST00000474929 SHEQ5VZ18 495 aa7.9□□□□□ -1.14
USP54-211ENST00000474929 IRGCQ6NXR0 463 aa7.9□□□□□ -1.14
USP54-211ENST00000474929 TMEM270Q6UE05 265 aa7.9□□□□□ -1.14
USP54-211ENST00000474929 TMEM110Q86TL2 294 aa7.9□□□□□ -1.14
USP54-211ENST00000474929 DMRTC2Q8IXT2 367 aaPredicted RBP7.9□□□□□ -1.14
USP54-211ENST00000474929 DRC7Q8IY82 874 aa7.9□□□□□ -1.14
USP54-211ENST00000474929 SYTL1Q8IYJ3 562 aa7.9□□□□□ -1.14
USP54-211ENST00000474929 DEFB106AQ8N104 65 aa7.9□□□□□ -1.14
USP54-211ENST00000474929 VOPP1Q96AW1 172 aa7.9□□□□□ -1.14
USP54-211ENST00000474929 C7orf25Q9BPX7 421 aa7.9□□□□□ -1.14
USP54-211ENST00000474929 TMEM121Q9BTD3 319 aa7.9□□□□□ -1.14
USP54-211ENST00000474929 MLPHQ9BV36 600 aaPredicted RBP7.9□□□□□ -1.14
USP54-211ENST00000474929 POLDIP3Q9BY77 421 aaKnown RBP7.9□□□□□ -1.14
USP54-211ENST00000474929 SLC7A5P2Q9GIP4 190 aa7.9□□□□□ -1.14
USP54-211ENST00000474929 RMI1Q9H9A7 625 aa7.9□□□□□ -1.14
USP54-211ENST00000474929 SLC39A2Q9NP94 309 aa7.9□□□□□ -1.14
USP54-211ENST00000474929 SEPT11Q9NVA2 429 aaKnown RBP7.9□□□□□ -1.14
USP54-211ENST00000474929 P4HTMQ9NXG6 502 aa7.9□□□□□ -1.14
USP54-211ENST00000474929 OGFRQ9NZT2 677 aa7.9□□□□□ -1.14
USP54-211ENST00000474929 VPS18Q9P253 973 aa7.9□□□□□ -1.14
USP54-211ENST00000474929 ZNF212Q9UDV6 495 aa7.9□□□□□ -1.14
USP54-211ENST00000474929 MAPK8IP1Q9UQF2 711 aa7.9□□□□□ -1.14
USP54-211ENST00000474929 CSAG2Q9Y5P2 127 aa7.9□□□□□ -1.14
USP54-211ENST00000474929 MORC2Q9Y6X9 1032 aaPredicted RBP7.9□□□□□ -1.14
USP54-211ENST00000474929 GOLGA6CA6NDK9 693 aa7.89□□□□□ -1.15
USP54-211ENST00000474929 GOLGA6BA6NDN3 693 aa7.89□□□□□ -1.15
USP54-211ENST00000474929 SLC9B1P1A6NJY1 282 aa7.89□□□□□ -1.15
USP54-211ENST00000474929 AGPSO00116 658 aa7.89□□□□□ -1.15
USP54-211ENST00000474929 BUB1O43683 1085 aa7.89□□□□□ -1.15
USP54-211ENST00000474929 LY6G6DO95868 133 aa7.89□□□□□ -1.15
USP54-211ENST00000474929 FUCA1P04066 466 aa7.89□□□□□ -1.15
USP54-211ENST00000474929 GOLGA6DP0CG33 693 aa7.89□□□□□ -1.15
USP54-211ENST00000474929 PYGMP11217 842 aa7.89□□□□□ -1.15
USP54-211ENST00000474929 FOLR1P15328 257 aa7.89□□□□□ -1.15
USP54-211ENST00000474929 TYRP1P17643 537 aa7.89□□□□□ -1.15
USP54-211ENST00000474929 XRCC1P18887 633 aaPredicted RBP7.89□□□□□ -1.15
USP54-211ENST00000474929 NR2F2P24468 414 aa7.89□□□□□ -1.15
USP54-211ENST00000474929 BRD2P25440 801 aaKnown RBP7.89□□□□□ -1.15
USP54-211ENST00000474929 RORAP35398 523 aa7.89□□□□□ -1.15
USP54-211ENST00000474929 CXCR3P49682 368 aa7.89□□□□□ -1.15
USP54-211ENST00000474929 DPTQ07507 201 aa7.89□□□□□ -1.15
USP54-211ENST00000474929 PAK1Q13153 545 aa7.89□□□□□ -1.15
USP54-211ENST00000474929 PLEKHS1Q5SXH7 462 aa7.89□□□□□ -1.15
USP54-211ENST00000474929 PRAMEF13Q5VWM6 474 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms