RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 ANKMY1Q9P2S6 941 aa15.48■□□□□ 0.07
SRRT-209ENST00000474896 KLHL3Q9UH77 587 aa15.48■□□□□ 0.07
SRRT-209ENST00000474896 CNOT6Q9ULM6 557 aaKnown RBP15.48■□□□□ 0.07
SRRT-209ENST00000474896 KCNK6Q9Y257 313 aa15.48■□□□□ 0.07
SRRT-209ENST00000474896 OAS3Q9Y6K5 1087 aaKnown RBP15.48■□□□□ 0.07
SRRT-209ENST00000474896 SNX2O60749 519 aa15.47■□□□□ 0.07
SRRT-209ENST00000474896 IL4RP24394 825 aa15.47■□□□□ 0.07
SRRT-209ENST00000474896 MAN1A1P33908 653 aa15.47■□□□□ 0.07
SRRT-209ENST00000474896 DSC2Q02487 901 aa15.47■□□□□ 0.07
SRRT-209ENST00000474896 ABHD18Q0P651 414 aa15.47■□□□□ 0.07
SRRT-209ENST00000474896 MMRN1Q13201 1228 aa15.47■□□□□ 0.07
SRRT-209ENST00000474896 KRT81Q14533 505 aa15.47■□□□□ 0.07
SRRT-209ENST00000474896 DEFB109BQ30KR1 87 aa15.47■□□□□ 0.07
SRRT-209ENST00000474896 CCDC122Q5T0U0 273 aa15.47■□□□□ 0.07
SRRT-209ENST00000474896 SLC9B2Q86UD5 537 aa15.47■□□□□ 0.07
SRRT-209ENST00000474896 TEKT4Q8WW24 435 aa15.47■□□□□ 0.07
SRRT-209ENST00000474896 ABHD17AQ96GS6 310 aa15.47■□□□□ 0.07
SRRT-209ENST00000474896 BTBD6Q96KE9 485 aa15.47■□□□□ 0.07
SRRT-209ENST00000474896 CCDC42Q96M95 316 aa15.47■□□□□ 0.07
SRRT-209ENST00000474896 STN1Q9H668 368 aaKnown RBP15.47■□□□□ 0.07
SRRT-209ENST00000474896 RBM22Q9NW64 420 aaKnown RBP eCLIP15.47■□□□□ 0.074e-14■■□□□ 13.5
SRRT-209ENST00000474896 VPS18Q9P253 973 aa15.47■□□□□ 0.07
SRRT-209ENST00000474896 ANAPC2Q9UJX6 822 aa15.47■□□□□ 0.07
SRRT-209ENST00000474896 NBASA2RRP1 2371 aa15.47■□□□□ 0.07
SRRT-209ENST00000474896 POLR1CO15160 346 aaPredicted RBP15.46■□□□□ 0.07
SRRT-209ENST00000474896 AKR1B10O60218 316 aa15.46■□□□□ 0.07
SRRT-209ENST00000474896 STK17BO94768 372 aa15.46■□□□□ 0.07
SRRT-209ENST00000474896 PRLP01236 227 aa15.46■□□□□ 0.07
SRRT-209ENST00000474896 CES1P23141 567 aa15.46■□□□□ 0.07
SRRT-209ENST00000474896 OAS2P29728 719 aaKnown RBP15.46■□□□□ 0.07
SRRT-209ENST00000474896 FOXK1P85037 733 aa15.46■□□□□ 0.07
SRRT-209ENST00000474896 CDC20Q12834 499 aa15.46■□□□□ 0.07
SRRT-209ENST00000474896 SLC18A3Q16572 532 aa15.46■□□□□ 0.07
SRRT-209ENST00000474896 C16orf46Q6P387 395 aa15.46■□□□□ 0.07
SRRT-209ENST00000474896 LYSMD3Q7Z3D4 306 aa15.46■□□□□ 0.07
SRRT-209ENST00000474896 TMTC1Q8IUR5 882 aa15.46■□□□□ 0.07
SRRT-209ENST00000474896 TMEM139Q8IV31 216 aa15.46■□□□□ 0.07
SRRT-209ENST00000474896 APOBEC4Q8WW27 367 aaKnown RBP15.46■□□□□ 0.07
SRRT-209ENST00000474896 WDR24Q96S15 920 aa15.46■□□□□ 0.07
SRRT-209ENST00000474896 BAG1Q99933 345 aaPredicted RBP15.46■□□□□ 0.07
SRRT-209ENST00000474896 TRIT1Q9H3H1 467 aaKnown RBP15.46■□□□□ 0.07
SRRT-209ENST00000474896 DNPEPQ9ULA0 475 aa15.46■□□□□ 0.07
SRRT-209ENST00000474896 NENFQ9UMX5 172 aa15.46■□□□□ 0.07
SRRT-209ENST00000474896 TTLL3Q9Y4R7 772 aa15.46■□□□□ 0.07
SRRT-209ENST00000474896 TMEM184BQ9Y519 407 aaPredicted RBP15.46■□□□□ 0.07
SRRT-209ENST00000474896 COL12A1Q99715 3063 aa15.45■□□□□ 0.06
SRRT-209ENST00000474896 SOWAHDA6NJG2 315 aa15.45■□□□□ 0.06
SRRT-209ENST00000474896 MATN3O15232 486 aa15.45■□□□□ 0.06
SRRT-209ENST00000474896 CD48P09326 243 aa15.45■□□□□ 0.06
SRRT-209ENST00000474896 ACP5P13686 325 aa15.45■□□□□ 0.06
SRRT-209ENST00000474896 TCN2P20062 427 aa15.45■□□□□ 0.06
SRRT-209ENST00000474896 GARSP41250 739 aaKnown RBP15.45■□□□□ 0.06
SRRT-209ENST00000474896 EPHA4P54764 986 aa15.45■□□□□ 0.06
SRRT-209ENST00000474896 MC1RQ01726 317 aa15.45■□□□□ 0.06
SRRT-209ENST00000474896 SLC25A11Q02978 314 aaKnown RBP15.45■□□□□ 0.06
SRRT-209ENST00000474896 ALKBH5Q6P6C2 394 aaKnown RBP15.45■□□□□ 0.06
SRRT-209ENST00000474896 RAVER1Q8IY67 606 aaKnown RBP15.45■□□□□ 0.06
SRRT-209ENST00000474896 LPCAT1Q8NF37 534 aa15.45■□□□□ 0.06
SRRT-209ENST00000474896 ARRDC2Q8TBH0 407 aa15.45■□□□□ 0.06
SRRT-209ENST00000474896 MAML1Q92585 1016 aa15.45■□□□□ 0.06
SRRT-209ENST00000474896 HERPUD2Q9BSE4 406 aa15.45■□□□□ 0.06
SRRT-209ENST00000474896 TBC1D10AQ9BXI6 508 aa15.45■□□□□ 0.06
SRRT-209ENST00000474896 TDRD1Q9BXT4 1180 aaKnown RBP15.45■□□□□ 0.06
SRRT-209ENST00000474896 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.45■□□□□ 0.06
SRRT-209ENST00000474896 FAM83DQ9H4H8 585 aa15.45■□□□□ 0.06
SRRT-209ENST00000474896 RMI1Q9H9A7 625 aa15.45■□□□□ 0.06
SRRT-209ENST00000474896 SPTLC3Q9NUV7 552 aa15.45■□□□□ 0.06
SRRT-209ENST00000474896 CPNE7Q9UBL6 633 aa15.45■□□□□ 0.06
SRRT-209ENST00000474896 IP6K2Q9UHH9 426 aa15.45■□□□□ 0.06
SRRT-209ENST00000474896 KIR2DS5A0A0G2JLQ3 304 aa15.44■□□□□ 0.06
SRRT-209ENST00000474896 A0A0G2JNG1 304 aa15.44■□□□□ 0.06
SRRT-209ENST00000474896 C1orf232A0A0U1RR37 186 aa15.44■□□□□ 0.06
SRRT-209ENST00000474896 A6NCN8 305 aa15.44■□□□□ 0.06
SRRT-209ENST00000474896 FADS2P1A8MWK0 482 aa15.44■□□□□ 0.06
SRRT-209ENST00000474896 KIR2DS3K7RE56 304 aa15.44■□□□□ 0.06
SRRT-209ENST00000474896 GRID2O43424 1007 aa15.44■□□□□ 0.06
SRRT-209ENST00000474896 MFSD11O43934 449 aa15.44■□□□□ 0.06
SRRT-209ENST00000474896 DLGAP3O95886 979 aa15.44■□□□□ 0.06
SRRT-209ENST00000474896 F3P13726 295 aa15.44■□□□□ 0.06
SRRT-209ENST00000474896 SLC2A4P14672 509 aa15.44■□□□□ 0.06
SRRT-209ENST00000474896 CCNCP24863 283 aa15.44■□□□□ 0.06
SRRT-209ENST00000474896 CYLC1P35663 651 aaPredicted RBP15.44■□□□□ 0.06
SRRT-209ENST00000474896 SSR1P43307 286 aaKnown RBP15.44■□□□□ 0.06
SRRT-209ENST00000474896 NOP2P46087 812 aaKnown RBP15.44■□□□□ 0.06
SRRT-209ENST00000474896 SPINT3P49223 89 aa15.44■□□□□ 0.06
SRRT-209ENST00000474896 NIPAL4Q0D2K0 466 aa15.44■□□□□ 0.06
SRRT-209ENST00000474896 GALNT2Q10471 571 aa15.44■□□□□ 0.06
SRRT-209ENST00000474896 KIR2DS5Q14953 304 aa15.44■□□□□ 0.06
SRRT-209ENST00000474896 ATP1A1-AS1Q5TC04 95 aa15.44■□□□□ 0.06
SRRT-209ENST00000474896 ALG1LQ6GMV1 187 aa15.44■□□□□ 0.06
SRRT-209ENST00000474896 TIGD7Q6NT04 549 aaPredicted RBP15.44■□□□□ 0.06
SRRT-209ENST00000474896 PLXDC1Q8IUK5 500 aa15.44■□□□□ 0.06
SRRT-209ENST00000474896 CCDC170Q8IYT3 715 aa15.44■□□□□ 0.06
SRRT-209ENST00000474896 NIPA2Q8N8Q9 360 aa15.44■□□□□ 0.06
SRRT-209ENST00000474896 LRRN4Q8WUT4 740 aa15.44■□□□□ 0.06
SRRT-209ENST00000474896 STARD8Q92502 1023 aa15.44■□□□□ 0.06
SRRT-209ENST00000474896 RNF31Q96EP0 1072 aa15.44■□□□□ 0.06
SRRT-209ENST00000474896 THAP2Q9H0W7 228 aa15.44■□□□□ 0.06
SRRT-209ENST00000474896 PCDH9Q9HC56 1237 aa15.44■□□□□ 0.06
SRRT-209ENST00000474896 PRDM8Q9NQV8 689 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms