RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 CLEC4EQ9ULY5 219 aa21.6■■□□□ 1.05
CCM2-206ENST00000474617 TNPO3Q9Y5L0 923 aaKnown RBP21.6■■□□□ 1.05
CCM2-206ENST00000474617 NEDD8-MDP1E9PL57 170 aa21.59■■□□□ 1.05
CCM2-206ENST00000474617 CCNT2O60583 730 aaKnown RBP21.59■■□□□ 1.05
CCM2-206ENST00000474617 TYRP14679 529 aa21.59■■□□□ 1.05
CCM2-206ENST00000474617 HNRNPLP14866 589 aaKnown RBP eCLIP21.59■■□□□ 1.05
CCM2-206ENST00000474617 ZNF30P17039 623 aa21.59■■□□□ 1.05
CCM2-206ENST00000474617 CTPS1P17812 591 aa21.59■■□□□ 1.05
CCM2-206ENST00000474617 ACRV1P26436 265 aa21.59■■□□□ 1.05
CCM2-206ENST00000474617 CPA2P48052 419 aa21.59■■□□□ 1.05
CCM2-206ENST00000474617 C1QTNF8P60827 252 aa21.59■■□□□ 1.05
CCM2-206ENST00000474617 SQLEQ14534 574 aa21.59■■□□□ 1.05
CCM2-206ENST00000474617 NXNQ6DKJ4 435 aa21.59■■□□□ 1.05
CCM2-206ENST00000474617 PTRHD1Q6GMV3 140 aaKnown RBP21.59■■□□□ 1.05
CCM2-206ENST00000474617 MACC1Q6ZN28 852 aa21.59■■□□□ 1.05
CCM2-206ENST00000474617 PELI3Q8N2H9 469 aa21.59■■□□□ 1.05
CCM2-206ENST00000474617 CELF5Q8N6W0 485 aaKnown RBP21.59■■□□□ 1.05
CCM2-206ENST00000474617 FUBP1Q96AE4 644 aaKnown RBP21.59■■□□□ 1.05
CCM2-206ENST00000474617 TCEAL4Q96EI5 215 aa21.59■■□□□ 1.05
CCM2-206ENST00000474617 SERPINI1Q99574 410 aa21.59■■□□□ 1.05
CCM2-206ENST00000474617 NUSAP1Q9BXS6 441 aaKnown RBP21.59■■□□□ 1.05
CCM2-206ENST00000474617 OSBPL1AQ9BXW6 950 aa21.59■■□□□ 1.05
CCM2-206ENST00000474617 WDR55Q9H6Y2 383 aaPredicted RBP21.59■■□□□ 1.05
CCM2-206ENST00000474617 ASB8Q9H765 288 aa21.59■■□□□ 1.05
CCM2-206ENST00000474617 STOML1Q9UBI4 398 aa21.59■■□□□ 1.05
CCM2-206ENST00000474617 CCL26Q9Y258 94 aa21.59■■□□□ 1.05
CCM2-206ENST00000474617 SUPT3HB4E1H0 165 aa21.58■■□□□ 1.04
CCM2-206ENST00000474617 SUPT3HO75486 399 aa21.58■■□□□ 1.04
CCM2-206ENST00000474617 RFPL2O75678 378 aa21.58■■□□□ 1.04
CCM2-206ENST00000474617 TSPAN12O95859 305 aa21.58■■□□□ 1.04
CCM2-206ENST00000474617 RPS17P08708 135 aaKnown RBP21.58■■□□□ 1.04
CCM2-206ENST00000474617 ALPIP09923 528 aa21.58■■□□□ 1.04
CCM2-206ENST00000474617 GCKP35557 465 aa21.58■■□□□ 1.04
CCM2-206ENST00000474617 KCNC1P48547 511 aa21.58■■□□□ 1.04
CCM2-206ENST00000474617 CLCN7P51798 805 aa21.58■■□□□ 1.04
CCM2-206ENST00000474617 PFKFB4Q16877 469 aa21.58■■□□□ 1.04
CCM2-206ENST00000474617 TTLL9Q3SXZ7 439 aa21.58■■□□□ 1.04
CCM2-206ENST00000474617 SERPINA9Q86WD7 417 aa21.58■■□□□ 1.04
CCM2-206ENST00000474617 GPSM1Q86YR5 675 aa21.58■■□□□ 1.04
CCM2-206ENST00000474617 PHTF2Q8N3S3 785 aa21.58■■□□□ 1.04
CCM2-206ENST00000474617 JADE3Q92613 823 aa21.58■■□□□ 1.04
CCM2-206ENST00000474617 ASIC4Q96FT7 647 aa21.58■■□□□ 1.04
CCM2-206ENST00000474617 FAM161BQ96MY7 647 aa21.58■■□□□ 1.04
CCM2-206ENST00000474617 THTPAQ9BU02 230 aa21.58■■□□□ 1.04
CCM2-206ENST00000474617 IL26Q9NPH9 171 aa21.58■■□□□ 1.04
CCM2-206ENST00000474617 LATS2Q9NRM7 1088 aa21.58■■□□□ 1.04
CCM2-206ENST00000474617 UBXN8O00124 270 aa21.57■■□□□ 1.04
CCM2-206ENST00000474617 BTN3A1O00481 513 aa21.57■■□□□ 1.04
CCM2-206ENST00000474617 NEMP1O14524 444 aa21.57■■□□□ 1.04
CCM2-206ENST00000474617 SNX2O60749 519 aa21.57■■□□□ 1.04
CCM2-206ENST00000474617 ECI2O75521 394 aa21.57■■□□□ 1.04
CCM2-206ENST00000474617 SRPRAP08240 638 aaKnown RBP21.57■■□□□ 1.04
CCM2-206ENST00000474617 PRSS56P0CW18 603 aa21.57■■□□□ 1.04
CCM2-206ENST00000474617 CBSLP0DN79 551 aa21.57■■□□□ 1.04
CCM2-206ENST00000474617 POLR2EP19388 210 aaKnown RBP21.57■■□□□ 1.04
CCM2-206ENST00000474617 DGKAP23743 735 aa21.57■■□□□ 1.04
CCM2-206ENST00000474617 CBSP35520 551 aa21.57■■□□□ 1.04
CCM2-206ENST00000474617 CCR10P46092 362 aa21.57■■□□□ 1.04
CCM2-206ENST00000474617 CCNHP51946 323 aaPredicted RBP21.57■■□□□ 1.04
CCM2-206ENST00000474617 PREPLQ4J6C6 727 aaPredicted RBP21.57■■□□□ 1.04
CCM2-206ENST00000474617 RAVER1Q8IY67 606 aaKnown RBP21.57■■□□□ 1.04
CCM2-206ENST00000474617 KYQ8NBH2 561 aa21.57■■□□□ 1.04
CCM2-206ENST00000474617 EID2BQ96D98 161 aa21.57■■□□□ 1.04
CCM2-206ENST00000474617 LINGO1Q96FE5 620 aa21.57■■□□□ 1.04
CCM2-206ENST00000474617 LENG8Q96PV6 779 aaPredicted RBP21.57■■□□□ 1.04
CCM2-206ENST00000474617 SMG9Q9H0W8 520 aaKnown RBP21.57■■□□□ 1.04
CCM2-206ENST00000474617 TNKS2Q9H2K2 1166 aa21.57■■□□□ 1.04
CCM2-206ENST00000474617 CD248Q9HCU0 757 aa21.57■■□□□ 1.04
CCM2-206ENST00000474617 BCAP29Q9UHQ4 241 aa21.57■■□□□ 1.04
CCM2-206ENST00000474617 CRLS1Q9UJA2 301 aa21.57■■□□□ 1.04
CCM2-206ENST00000474617 GIPC1O14908 333 aa21.56■■□□□ 1.04
CCM2-206ENST00000474617 AZIN1O14977 448 aa21.56■■□□□ 1.04
CCM2-206ENST00000474617 NIPSNAP2O75323 286 aa21.56■■□□□ 1.04
CCM2-206ENST00000474617 FKBP6O75344 327 aa21.56■■□□□ 1.04
CCM2-206ENST00000474617 GPC4O75487 556 aa21.56■■□□□ 1.04
CCM2-206ENST00000474617 CYP2A6P11509 494 aaPredicted RBP21.56■■□□□ 1.04
CCM2-206ENST00000474617 BPIP17213 487 aa21.56■■□□□ 1.04
CCM2-206ENST00000474617 NSG1P42857 185 aa21.56■■□□□ 1.04
CCM2-206ENST00000474617 ACADVLP49748 655 aa21.56■■□□□ 1.04
CCM2-206ENST00000474617 CDKN1CP49918 316 aaPredicted RBP21.56■■□□□ 1.04
CCM2-206ENST00000474617 ACTR3P61158 418 aa21.56■■□□□ 1.04
CCM2-206ENST00000474617 STX5Q13190 355 aa21.56■■□□□ 1.04
CCM2-206ENST00000474617 TSNQ15631 228 aaKnown RBP21.56■■□□□ 1.04
CCM2-206ENST00000474617 TTC23LQ6PF05 361 aa21.56■■□□□ 1.04
CCM2-206ENST00000474617 ADGRG2Q8IZP9 1017 aa21.56■■□□□ 1.04
CCM2-206ENST00000474617 NXPE1Q8N323 547 aa21.56■■□□□ 1.04
CCM2-206ENST00000474617 OR6K2Q8NGY2 324 aa21.56■■□□□ 1.04
CCM2-206ENST00000474617 PANX3Q96QZ0 392 aa21.56■■□□□ 1.04
CCM2-206ENST00000474617 LBHD1Q9BQE6 289 aaPredicted RBP21.56■■□□□ 1.04
CCM2-206ENST00000474617 C17orf80Q9BSJ5 609 aa21.56■■□□□ 1.04
CCM2-206ENST00000474617 EFCAB1Q9HAE3 211 aa21.56■■□□□ 1.04
CCM2-206ENST00000474617 MRPL40Q9NQ50 206 aaKnown RBP21.56■■□□□ 1.04
CCM2-206ENST00000474617 UTP6Q9NYH9 597 aaKnown RBP21.56■■□□□ 1.04
CCM2-206ENST00000474617 FBXO10Q9UK96 956 aa21.56■■□□□ 1.04
CCM2-206ENST00000474617 NRG2O14511 850 aaPredicted RBP21.55■■□□□ 1.04
CCM2-206ENST00000474617 GAPDHSO14556 408 aaPredicted RBP21.55■■□□□ 1.04
CCM2-206ENST00000474617 UBDO15205 165 aa21.55■■□□□ 1.04
CCM2-206ENST00000474617 OR1I1O60431 355 aa21.55■■□□□ 1.04
CCM2-206ENST00000474617 CLDN7O95471 211 aa21.55■■□□□ 1.04
CCM2-206ENST00000474617 CHEK2O96017 543 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms