RNA–Protein interactions for RNA: ENST00000472883.1

CDK5RAP2-208, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 3

Gene CDK5RAP2, Length 389 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-208	ENST00000472883		Q6ZPB1	254 aa	Predicted RBP	7.09	□□□□□ -1.27
CDK5RAP2-208	ENST00000472883	TMEM26	Q6ZUK4	368 aa		7.09	□□□□□ -1.27
CDK5RAP2-208	ENST00000472883	INTS8	Q75QN2	995 aa	Known RBP	7.09	□□□□□ -1.27
CDK5RAP2-208	ENST00000472883	KMT5C	Q86Y97	462 aa		7.09	□□□□□ -1.27
CDK5RAP2-208	ENST00000472883	EID3	Q8N140	333 aa		7.09	□□□□□ -1.27
CDK5RAP2-208	ENST00000472883	PELI3	Q8N2H9	469 aa		7.09	□□□□□ -1.27
CDK5RAP2-208	ENST00000472883	DNAAF3	Q8N9W5	541 aa		7.09	□□□□□ -1.27
CDK5RAP2-208	ENST00000472883	CPT1B	Q92523	772 aa		7.09	□□□□□ -1.27
CDK5RAP2-208	ENST00000472883	MAGEB10	Q96LZ2	347 aa	Predicted RBP	7.09	□□□□□ -1.27
CDK5RAP2-208	ENST00000472883	PCMTD1	Q96MG8	357 aa	Predicted RBP	7.09	□□□□□ -1.27
CDK5RAP2-208	ENST00000472883	ZNF641	Q96N77	438 aa	Predicted RBP	7.09	□□□□□ -1.27
CDK5RAP2-208	ENST00000472883	TAAR6	Q96RI8	345 aa		7.09	□□□□□ -1.27
CDK5RAP2-208	ENST00000472883	TUBB2B	Q9BVA1	445 aa		7.09	□□□□□ -1.27
CDK5RAP2-208	ENST00000472883	POLDIP3	Q9BY77	421 aa	Known RBP	7.09	□□□□□ -1.27
CDK5RAP2-208	ENST00000472883	SUV39H2	Q9H5I1	410 aa		7.09	□□□□□ -1.27
CDK5RAP2-208	ENST00000472883	RETREG1	Q9H6L5	497 aa		7.09	□□□□□ -1.27
CDK5RAP2-208	ENST00000472883	ZNF358	Q9NW07	568 aa		7.09	□□□□□ -1.27
CDK5RAP2-208	ENST00000472883	TMEM51	Q9NW97	253 aa		7.09	□□□□□ -1.27
CDK5RAP2-208	ENST00000472883	P4HTM	Q9NXG6	502 aa		7.09	□□□□□ -1.27
CDK5RAP2-208	ENST00000472883	COQ3	Q9NZJ6	369 aa		7.09	□□□□□ -1.27
CDK5RAP2-208	ENST00000472883	MPP6	Q9NZW5	540 aa		7.09	□□□□□ -1.27
CDK5RAP2-208	ENST00000472883	TINAG	Q9UJW2	476 aa		7.09	□□□□□ -1.27
CDK5RAP2-208	ENST00000472883	ACTL7A	Q9Y615	435 aa		7.09	□□□□□ -1.27
CDK5RAP2-208	ENST00000472883	USF3	Q68DE3	2245 aa		7.09	□□□□□ -1.27
CDK5RAP2-208	ENST00000472883	ZNF407	Q9C0G0	2248 aa		7.08	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	SYNJ2BP-COX16	A0A087WUM0	186 aa		7.08	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	TRIM49B	A6NDI0	452 aa		7.08	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883		C9J4A7	227 aa		7.08	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	HTRA2	O43464	458 aa	Predicted RBP	7.08	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	KIF1C	O43896	1103 aa	Known RBP	7.08	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	SNRNP200	O75643	2136 aa	Known RBP	7.08	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	CD63	P08962	238 aa		7.08	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	TYRP1	P17643	537 aa		7.08	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	GM2A	P17900	193 aa		7.08	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	UGT1A4	P22310	534 aa		7.08	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	MSX1	P28360	303 aa		7.08	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	RORA	P35398	523 aa		7.08	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	UBE2I	P63279	158 aa	Known RBP	7.08	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	DEFB113	Q30KQ7	82 aa		7.08	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	INO80D	Q53TQ3	878 aa	Predicted RBP	7.08	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	BRMS1L	Q5PSV4	323 aa		7.08	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	FAM69B	Q5VUD6	431 aa		7.08	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	SHE	Q5VZ18	495 aa		7.08	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	LCN10	Q6JVE6	187 aa		7.08	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	GALNT13	Q8IUC8	556 aa		7.08	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	SYTL1	Q8IYJ3	562 aa		7.08	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	LZTR1	Q8N653	840 aa		7.08	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	SLC38A9	Q8NBW4	561 aa		7.08	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	C3orf20	Q8ND61	904 aa		7.08	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	FBXL13	Q8NEE6	735 aa		7.08	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	STK32A	Q8WU08	396 aa		7.08	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	PTCD2	Q8WV60	388 aa	Known RBP	7.08	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	TFAP2B	Q92481	460 aa		7.08	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	NACC2	Q96BF6	587 aa		7.08	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	NUS1	Q96E22	293 aa		7.08	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	SLC2A13	Q96QE2	648 aa		7.08	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	LMF1	Q96S06	567 aa		7.08	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	NCAPG	Q9BPX3	1015 aa		7.08	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	C17orf62	Q9BQA9	187 aa		7.08	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	NDC1	Q9BTX1	674 aa		7.08	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	MLPH	Q9BV36	600 aa	Predicted RBP	7.08	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	LIME1	Q9H400	295 aa		7.08	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	NPDC1	Q9NQX5	325 aa	Predicted RBP	7.08	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	ST7	Q9NRC1	585 aa		7.08	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	KCND1	Q9NSA2	647 aa		7.08	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	NDFIP2	Q9NV92	336 aa		7.08	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	KBTBD4	Q9NVX7	518 aa		7.08	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	RAB20	Q9NX57	234 aa		7.08	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	COX16	Q9P0S2	106 aa		7.08	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	TBC1D29	Q9UFV1	150 aa		7.08	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	LIMCH1	Q9UPQ0	1083 aa		7.08	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	ZNF835	Q9Y2P0	537 aa		7.08	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	TRAV17	A0A0B4J275	112 aa		7.07	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	CCDC78	A2IDD5	438 aa		7.07	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	IDS	B3KWA1	339 aa		7.07	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	PRAMEF2	O60811	474 aa		7.07	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	KLF7	O75840	302 aa	Predicted RBP	7.07	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	TMCC1	O94876	653 aa		7.07	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	SLCO2B1	O94956	709 aa		7.07	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	ZRANB2	O95218	330 aa	Known RBP eCLIP	7.07	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	NR3C1	P04150	777 aa		7.07	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	EBLN1	P0CF75	366 aa		7.07	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	KRT13	P13646	458 aa		7.07	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	XRCC1	P18887	633 aa	Predicted RBP	7.07	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	IDS	P22304	550 aa		7.07	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	POLD2	P49005	469 aa		7.07	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	NASP	P49321	788 aa	Predicted RBP	7.07	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	CXCR3	P49682	368 aa		7.07	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	NEK4	P51957	841 aa		7.07	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	RHOA	P61586	193 aa		7.07	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	TFF3	Q07654	80 aa		7.07	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	NME3	Q13232	169 aa		7.07	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	CUL2	Q13617	745 aa		7.07	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	BECN1	Q14457	450 aa		7.07	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	ACOX1	Q15067	660 aa		7.07	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	PLCL1	Q15111	1095 aa		7.07	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	CYP2A13	Q16696	494 aa		7.07	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	PRAMEF13	Q5VWM6	474 aa		7.07	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	HMBOX1	Q6NT76	420 aa		7.07	□□□□□ -1.28
CDK5RAP2-208	ENST00000472883	FAM92B	Q6ZTR7	304 aa		7.07	□□□□□ -1.28

Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms