RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 GPR1P46091 355 aa9.23□□□□□ -0.93
VCL-204ENST00000472585 HCAR3P49019 387 aa9.23□□□□□ -0.93
VCL-204ENST00000472585 PMS2P54278 862 aa9.23□□□□□ -0.93
VCL-204ENST00000472585 GFERP55789 205 aa9.23□□□□□ -0.93
VCL-204ENST00000472585 UBE2HP62256 183 aa9.23□□□□□ -0.93
VCL-204ENST00000472585 SH3BP2P78314 561 aa9.23□□□□□ -0.93
VCL-204ENST00000472585 MRPL49Q13405 166 aaKnown RBP9.23□□□□□ -0.93
VCL-204ENST00000472585 SYCP1Q15431 976 aa9.23□□□□□ -0.93
VCL-204ENST00000472585 PPP6R3Q5H9R7 873 aaPredicted RBP9.23□□□□□ -0.93
VCL-204ENST00000472585 FAM182AQ5T1J6 154 aa9.23□□□□□ -0.93
VCL-204ENST00000472585 TMCO4Q5TGY1 634 aa9.23□□□□□ -0.93
VCL-204ENST00000472585 LRRC66Q68CR7 880 aa9.23□□□□□ -0.93
VCL-204ENST00000472585 TXNRD3NBQ6F5E7 133 aa9.23□□□□□ -0.93
VCL-204ENST00000472585 PLEKHA7Q6IQ23 1121 aa9.23□□□□□ -0.93
VCL-204ENST00000472585 APTXQ7Z2E3 356 aaKnown RBP9.23□□□□□ -0.93
VCL-204ENST00000472585 SLC34A3Q8N130 599 aa9.23□□□□□ -0.93
VCL-204ENST00000472585 PAF1Q8N7H5 531 aa9.23□□□□□ -0.93
VCL-204ENST00000472585 AP2M1Q96CW1 435 aa9.23□□□□□ -0.93
VCL-204ENST00000472585 C5orf34Q96MH7 638 aa9.23□□□□□ -0.93
VCL-204ENST00000472585 ZNF599Q96NL3 588 aa9.23□□□□□ -0.93
VCL-204ENST00000472585 RUFY1Q96T51 708 aa9.23□□□□□ -0.93
VCL-204ENST00000472585 MGME1Q9BQP7 344 aa9.23□□□□□ -0.93
VCL-204ENST00000472585 RIOK2Q9BVS4 552 aaKnown RBP9.23□□□□□ -0.93
VCL-204ENST00000472585 TRIM55Q9BYV6 548 aa9.23□□□□□ -0.93
VCL-204ENST00000472585 GOLGA6AQ9NYA3 693 aa9.23□□□□□ -0.93
VCL-204ENST00000472585 DTLQ9NZJ0 730 aa9.23□□□□□ -0.93
VCL-204ENST00000472585 SLC30A1Q9Y6M5 507 aa9.23□□□□□ -0.93
VCL-204ENST00000472585 DIDO1Q9BTC0 2240 aaKnown RBP9.22□□□□□ -0.93
VCL-204ENST00000472585 WIPF3A6NGB9 483 aa9.22□□□□□ -0.93
VCL-204ENST00000472585 FADS2P1A8MWK0 482 aa9.22□□□□□ -0.93
VCL-204ENST00000472585 TMCO5BA8MYB1 307 aa9.22□□□□□ -0.93
VCL-204ENST00000472585 TCP11X1B4DZS4 312 aa9.22□□□□□ -0.93
VCL-204ENST00000472585 PSMD11O00231 422 aa9.22□□□□□ -0.93
VCL-204ENST00000472585 DAPK3O43293 454 aa9.22□□□□□ -0.93
VCL-204ENST00000472585 SOCS5O75159 536 aa9.22□□□□□ -0.93
VCL-204ENST00000472585 LRCH4O75427 683 aa9.22□□□□□ -0.93
VCL-204ENST00000472585 LDLRP01130 860 aa9.22□□□□□ -0.93
VCL-204ENST00000472585 PSMA2P25787 234 aa9.22□□□□□ -0.93
VCL-204ENST00000472585 RENBPP51606 427 aa9.22□□□□□ -0.93
VCL-204ENST00000472585 PGDP52209 483 aa9.22□□□□□ -0.93
VCL-204ENST00000472585 HHEXQ03014 270 aa9.22□□□□□ -0.93
VCL-204ENST00000472585 MAP7Q14244 749 aa9.22□□□□□ -0.93
VCL-204ENST00000472585 INPP5JQ15735 1006 aaPredicted RBP9.22□□□□□ -0.93
VCL-204ENST00000472585 NADK2Q4G0N4 442 aa9.22□□□□□ -0.93
VCL-204ENST00000472585 ZNF648Q5T619 568 aaPredicted RBP9.22□□□□□ -0.93
VCL-204ENST00000472585 DCUN1D2Q6PH85 259 aa9.22□□□□□ -0.93
VCL-204ENST00000472585 NLRP8Q86W28 1048 aa9.22□□□□□ -0.93
VCL-204ENST00000472585 GALNT6Q8NCL4 622 aa9.22□□□□□ -0.93
VCL-204ENST00000472585 OR10G6Q8NH81 332 aa9.22□□□□□ -0.93
VCL-204ENST00000472585 EID2BQ96D98 161 aa9.22□□□□□ -0.93
VCL-204ENST00000472585 TWSG1Q9GZX9 223 aa9.22□□□□□ -0.93
VCL-204ENST00000472585 SARS2Q9NP81 518 aaKnown RBP9.22□□□□□ -0.93
VCL-204ENST00000472585 SLAMF7Q9NQ25 335 aa9.22□□□□□ -0.93
VCL-204ENST00000472585 SEPT11Q9NVA2 429 aaKnown RBP9.22□□□□□ -0.93
VCL-204ENST00000472585 FANCLQ9NW38 375 aa9.22□□□□□ -0.93
VCL-204ENST00000472585 ZNHIT2Q9UHR6 403 aa9.22□□□□□ -0.93
VCL-204ENST00000472585 KCND3Q9UK17 655 aa9.22□□□□□ -0.93
VCL-204ENST00000472585 CROTQ9UKG9 612 aa9.22□□□□□ -0.93
VCL-204ENST00000472585 KCNK6Q9Y257 313 aa9.22□□□□□ -0.93
VCL-204ENST00000472585 CSMD1Q96PZ7 3565 aa9.22□□□□□ -0.93
VCL-204ENST00000472585 CELSR1Q9NYQ6 3014 aa9.22□□□□□ -0.93
VCL-204ENST00000472585 A0A0J9YYE9 177 aa9.21□□□□□ -0.94
VCL-204ENST00000472585 PIPSLA2A3N6 862 aa9.21□□□□□ -0.94
VCL-204ENST00000472585 KIF1CO43896 1103 aaKnown RBP9.21□□□□□ -0.94
VCL-204ENST00000472585 TIAF1O95411 115 aa9.21□□□□□ -0.94
VCL-204ENST00000472585 CLDN7O95471 211 aa9.21□□□□□ -0.94
VCL-204ENST00000472585 TRBC1P01850 177 aa9.21□□□□□ -0.94
VCL-204ENST00000472585 C9P02748 559 aa9.21□□□□□ -0.94
VCL-204ENST00000472585 CYP2A6P11509 494 aaPredicted RBP9.21□□□□□ -0.94
VCL-204ENST00000472585 IL4RP24394 825 aa9.21□□□□□ -0.94
VCL-204ENST00000472585 GRNP28799 593 aaKnown RBP9.21□□□□□ -0.94
VCL-204ENST00000472585 MAPK9P45984 424 aa9.21□□□□□ -0.94
VCL-204ENST00000472585 LEPRP48357 1165 aaKnown RBP9.21□□□□□ -0.94
VCL-204ENST00000472585 STC1P52823 247 aa9.21□□□□□ -0.94
VCL-204ENST00000472585 COPS2P61201 443 aa9.21□□□□□ -0.94
VCL-204ENST00000472585 UBE2IP63279 158 aaKnown RBP9.21□□□□□ -0.94
VCL-204ENST00000472585 C6orf15Q6UXA7 325 aaPredicted RBP9.21□□□□□ -0.94
VCL-204ENST00000472585 CHST15Q7LFX5 561 aaPredicted RBP9.21□□□□□ -0.94
VCL-204ENST00000472585 POLNQ7Z5Q5 900 aa9.21□□□□□ -0.94
VCL-204ENST00000472585 ZC3H18Q86VM9 953 aaKnown RBP9.21□□□□□ -0.94
VCL-204ENST00000472585 GALNT13Q8IUC8 556 aa9.21□□□□□ -0.94
VCL-204ENST00000472585 APLFQ8IW19 511 aaPredicted RBP9.21□□□□□ -0.94
VCL-204ENST00000472585 TEX26Q8N6G2 289 aa9.21□□□□□ -0.94
VCL-204ENST00000472585 ENOX1Q8TC92 643 aaKnown RBP9.21□□□□□ -0.94
VCL-204ENST00000472585 LRRN4Q8WUT4 740 aa9.21□□□□□ -0.94
VCL-204ENST00000472585 C9orf72Q96LT7 481 aa9.21□□□□□ -0.94
VCL-204ENST00000472585 PLEKHG4BQ96PX9 1271 aa9.21□□□□□ -0.94
VCL-204ENST00000472585 SLC25A23Q9BV35 468 aa9.21□□□□□ -0.94
VCL-204ENST00000472585 ULBP3Q9BZM4 244 aa9.21□□□□□ -0.94
VCL-204ENST00000472585 HSD3B7Q9H2F3 369 aa9.21□□□□□ -0.94
VCL-204ENST00000472585 ARFGAP3Q9NP61 516 aa9.21□□□□□ -0.94
VCL-204ENST00000472585 KCTD5Q9NXV2 234 aa9.21□□□□□ -0.94
VCL-204ENST00000472585 ZNF624Q9P2J8 865 aaPredicted RBP9.21□□□□□ -0.94
VCL-204ENST00000472585 SLC23A2Q9UGH3 650 aa9.21□□□□□ -0.94
VCL-204ENST00000472585 ERRFI1Q9UJM3 462 aaPredicted RBP9.21□□□□□ -0.94
VCL-204ENST00000472585 SLC5A6Q9Y289 635 aa9.21□□□□□ -0.94
VCL-204ENST00000472585 ADGRG4Q8IZF6 3080 aa9.2□□□□□ -0.94
VCL-204ENST00000472585 PDZD2O15018 2839 aa9.2□□□□□ -0.94
VCL-204ENST00000472585 A0A1W2PQ67 120 aa9.2□□□□□ -0.94
VCL-204ENST00000472585 ANKRD62A6NC57 917 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms