RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 NKD1Q969G9 470 aa8□□□□□ -1.13
USP48-207ENST00000471752 TADA1Q96BN2 335 aa8□□□□□ -1.13
USP48-207ENST00000471752 IMP4Q96G21 291 aaKnown RBP8□□□□□ -1.13
USP48-207ENST00000471752 TMEM74Q96NL1 305 aa8□□□□□ -1.13
USP48-207ENST00000471752 OLFM3Q96PB7 478 aa8□□□□□ -1.13
USP48-207ENST00000471752 LYSMD1Q96S90 227 aa8□□□□□ -1.13
USP48-207ENST00000471752 SPRY4Q9C004 299 aa8□□□□□ -1.13
USP48-207ENST00000471752 STRADBQ9C0K7 418 aa8□□□□□ -1.13
USP48-207ENST00000471752 FAM83DQ9H4H8 585 aa8□□□□□ -1.13
USP48-207ENST00000471752 OGFRQ9NZT2 677 aa8□□□□□ -1.13
USP48-207ENST00000471752 TRIM10Q9UDY6 481 aa8□□□□□ -1.13
USP48-207ENST00000471752 KLHL3Q9UH77 587 aa8□□□□□ -1.13
USP48-207ENST00000471752 ADGRG1Q9Y653 693 aa8□□□□□ -1.13
USP48-207ENST00000471752 SLC30A1Q9Y6M5 507 aa8□□□□□ -1.13
USP48-207ENST00000471752 USP9XQ93008 2570 aaPredicted RBP8□□□□□ -1.13
USP48-207ENST00000471752 PTPN13Q12923 2485 aa8□□□□□ -1.13
USP48-207ENST00000471752 SCN8AQ9UQD0 1980 aa7.99□□□□□ -1.13
USP48-207ENST00000471752 RCCD1A6NED2 376 aa7.99□□□□□ -1.13
USP48-207ENST00000471752 EFCAB7A8K855 629 aa7.99□□□□□ -1.13
USP48-207ENST00000471752 GOLGA6L19H0YKK7 550 aa7.99□□□□□ -1.13
USP48-207ENST00000471752 PDE2AO00408 941 aaPredicted RBP7.99□□□□□ -1.13
USP48-207ENST00000471752 NKX2-8O15522 239 aa7.99□□□□□ -1.13
USP48-207ENST00000471752 DUX1O43812 170 aa7.99□□□□□ -1.13
USP48-207ENST00000471752 KIF1CO43896 1103 aaKnown RBP7.99□□□□□ -1.13
USP48-207ENST00000471752 AKR1B10O60218 316 aa7.99□□□□□ -1.13
USP48-207ENST00000471752 UGT1A9O60656 530 aa7.99□□□□□ -1.13
USP48-207ENST00000471752 PMPCBO75439 489 aa7.99□□□□□ -1.13
USP48-207ENST00000471752 THRAP10827 490 aa7.99□□□□□ -1.13
USP48-207ENST00000471752 BRAFP15056 766 aa7.99□□□□□ -1.13
USP48-207ENST00000471752 BPIP17213 487 aa7.99□□□□□ -1.13
USP48-207ENST00000471752 UGT1A6P19224 532 aa7.99□□□□□ -1.13
USP48-207ENST00000471752 UGT1A1P22309 533 aa7.99□□□□□ -1.13
USP48-207ENST00000471752 UGT1A4P22310 534 aa7.99□□□□□ -1.13
USP48-207ENST00000471752 PTPN3P26045 913 aa7.99□□□□□ -1.13
USP48-207ENST00000471752 UGT1A3P35503 534 aa7.99□□□□□ -1.13
USP48-207ENST00000471752 MAPK9P45984 424 aa7.99□□□□□ -1.13
USP48-207ENST00000471752 GFERP55789 205 aa7.99□□□□□ -1.13
USP48-207ENST00000471752 PPP1CAP62136 330 aa7.99□□□□□ -1.13
USP48-207ENST00000471752 RHDQ02161 417 aa7.99□□□□□ -1.13
USP48-207ENST00000471752 SDK2Q58EX2 2172 aa7.99□□□□□ -1.13
USP48-207ENST00000471752 ZFYVE27Q5T4F4 411 aa7.99□□□□□ -1.13
USP48-207ENST00000471752 ATP1A1-AS1Q5TC04 95 aa7.99□□□□□ -1.13
USP48-207ENST00000471752 ANKS6Q68DC2 871 aa7.99□□□□□ -1.13
USP48-207ENST00000471752 CRTC3Q6UUV7 619 aa7.99□□□□□ -1.13
USP48-207ENST00000471752 XKR5Q6UX68 686 aa7.99□□□□□ -1.13
USP48-207ENST00000471752 ARHGAP22Q7Z5H3 698 aa7.99□□□□□ -1.13
USP48-207ENST00000471752 TMC3Q7Z5M5 1100 aa7.99□□□□□ -1.13
USP48-207ENST00000471752 NLRP8Q86W28 1048 aa7.99□□□□□ -1.13
USP48-207ENST00000471752 RFX6Q8HWS3 928 aa7.99□□□□□ -1.13
USP48-207ENST00000471752 GALNT13Q8IUC8 556 aa7.99□□□□□ -1.13
USP48-207ENST00000471752 LRRC49Q8IUZ0 686 aa7.99□□□□□ -1.13
USP48-207ENST00000471752 NRSN1Q8IZ57 195 aa7.99□□□□□ -1.13
USP48-207ENST00000471752 BBS5Q8N3I7 341 aa7.99□□□□□ -1.13
USP48-207ENST00000471752 LSM14AQ8ND56 463 aaKnown RBP7.99□□□□□ -1.13
USP48-207ENST00000471752 EXD1Q8NHP7 514 aa7.99□□□□□ -1.13
USP48-207ENST00000471752 KIAA1524Q8TCG1 905 aa7.99□□□□□ -1.13
USP48-207ENST00000471752 CTNNBL1Q8WYA6 563 aaPredicted RBP7.99□□□□□ -1.13
USP48-207ENST00000471752 NCSTNQ92542 709 aa7.99□□□□□ -1.13
USP48-207ENST00000471752 FATE1Q969F0 183 aa7.99□□□□□ -1.13
USP48-207ENST00000471752 HAUS1Q96CS2 278 aa7.99□□□□□ -1.13
USP48-207ENST00000471752 HDAC11Q96DB2 347 aa7.99□□□□□ -1.13
USP48-207ENST00000471752 OXNAD1Q96HP4 312 aaPredicted RBP7.99□□□□□ -1.13
USP48-207ENST00000471752 PLEKHG4BQ96PX9 1271 aa7.99□□□□□ -1.13
USP48-207ENST00000471752 FAM118BQ9BPY3 351 aa7.99□□□□□ -1.13
USP48-207ENST00000471752 GORASP1Q9BQQ3 440 aa7.99□□□□□ -1.13
USP48-207ENST00000471752 MLPHQ9BV36 600 aaPredicted RBP7.99□□□□□ -1.13
USP48-207ENST00000471752 TRIM4Q9C037 500 aa7.99□□□□□ -1.13
USP48-207ENST00000471752 UGT1A7Q9HAW7 530 aa7.99□□□□□ -1.13
USP48-207ENST00000471752 UGT1A10Q9HAW8 530 aa7.99□□□□□ -1.13
USP48-207ENST00000471752 UGT1A8Q9HAW9 530 aa7.99□□□□□ -1.13
USP48-207ENST00000471752 GLOD4Q9HC38 313 aa7.99□□□□□ -1.13
USP48-207ENST00000471752 KLC4Q9NSK0 619 aa7.99□□□□□ -1.13
USP48-207ENST00000471752 ABHD10Q9NUJ1 306 aa7.99□□□□□ -1.13
USP48-207ENST00000471752 KCNK4Q9NYG8 393 aa7.99□□□□□ -1.13
USP48-207ENST00000471752 ZNF624Q9P2J8 865 aaPredicted RBP7.99□□□□□ -1.13
USP48-207ENST00000471752 PDP2Q9P2J9 529 aa7.99□□□□□ -1.13
USP48-207ENST00000471752 UVRAGQ9P2Y5 699 aa7.99□□□□□ -1.13
USP48-207ENST00000471752 IL17BQ9UHF5 180 aa7.99□□□□□ -1.13
USP48-207ENST00000471752 ACSL6Q9UKU0 697 aa7.99□□□□□ -1.13
USP48-207ENST00000471752 DNAJC16Q9Y2G8 782 aa7.99□□□□□ -1.13
USP48-207ENST00000471752 WDR37Q9Y2I8 494 aa7.99□□□□□ -1.13
USP48-207ENST00000471752 KCTD3Q9Y597 815 aa7.99□□□□□ -1.13
USP48-207ENST00000471752 PCDHGA4Q9Y5G9 962 aa7.99□□□□□ -1.13
USP48-207ENST00000471752 CENPEQ02224 2701 aa7.99□□□□□ -1.13
USP48-207ENST00000471752 NBPF19A0A087WUL8 3843 aa7.99□□□□□ -1.13
USP48-207ENST00000471752 A0A0U1RQJ8 604 aa7.98□□□□□ -1.13
USP48-207ENST00000471752 LOC101059948A0A1B0GTJ6 334 aa7.98□□□□□ -1.13
USP48-207ENST00000471752 A0A1W2PQ67 120 aa7.98□□□□□ -1.13
USP48-207ENST00000471752 PRR19A6NJB7 356 aa7.98□□□□□ -1.13
USP48-207ENST00000471752 GAPDHSO14556 408 aaPredicted RBP7.98□□□□□ -1.13
USP48-207ENST00000471752 GRID2O43424 1007 aa7.98□□□□□ -1.13
USP48-207ENST00000471752 NUAK1O60285 661 aa7.98□□□□□ -1.13
USP48-207ENST00000471752 MFAP3LO75121 409 aa7.98□□□□□ -1.13
USP48-207ENST00000471752 MTA2O94776 668 aa7.98□□□□□ -1.13
USP48-207ENST00000471752 KRT1P04264 644 aa7.98□□□□□ -1.13
USP48-207ENST00000471752 KRT7P08729 469 aa7.98□□□□□ -1.13
USP48-207ENST00000471752 LIPCP11150 499 aa7.98□□□□□ -1.13
USP48-207ENST00000471752 LIFP15018 202 aa7.98□□□□□ -1.13
USP48-207ENST00000471752 ZNF28P17035 718 aa7.98□□□□□ -1.13
USP48-207ENST00000471752 ZNF30P17039 623 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms