RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 ADARP55265 1226 aaKnown RBP9.8□□□□□ -0.84
SF3A1-207ENST00000471342 CDKN2DP55273 166 aa9.8□□□□□ -0.84
SF3A1-207ENST00000471342 CSTF1Q05048 431 aaKnown RBP9.8□□□□□ -0.84
SF3A1-207ENST00000471342 CACNG1Q06432 222 aa9.8□□□□□ -0.84
SF3A1-207ENST00000471342 PDE1CQ14123 709 aaPredicted RBP9.8□□□□□ -0.84
SF3A1-207ENST00000471342 INPP5AQ14642 412 aa9.8□□□□□ -0.84
SF3A1-207ENST00000471342 ACOX1Q15067 660 aa9.8□□□□□ -0.84
SF3A1-207ENST00000471342 ZKSCAN8Q15776 578 aaPredicted RBP9.8□□□□□ -0.84
SF3A1-207ENST00000471342 PLK5Q496M5 336 aa9.8□□□□□ -0.84
SF3A1-207ENST00000471342 PMS2CLQ68D20 193 aa9.8□□□□□ -0.84
SF3A1-207ENST00000471342 PDPK2PQ6A1A2 396 aa9.8□□□□□ -0.84
SF3A1-207ENST00000471342 TBC1D3GQ6DHY5 549 aa9.8□□□□□ -0.84
SF3A1-207ENST00000471342 TBC1D3CQ6IPX1 549 aa9.8□□□□□ -0.84
SF3A1-207ENST00000471342 CASC4Q6P4E1 433 aa9.8□□□□□ -0.84
SF3A1-207ENST00000471342 AFTPHQ6ULP2 937 aa9.8□□□□□ -0.84
SF3A1-207ENST00000471342 SERPINA9Q86WD7 417 aa9.8□□□□□ -0.84
SF3A1-207ENST00000471342 PALM2Q8IXS6 379 aa9.8□□□□□ -0.84
SF3A1-207ENST00000471342 TBC1D3Q8IZP1 549 aaPredicted RBP9.8□□□□□ -0.84
SF3A1-207ENST00000471342 TMEM151AQ8N4L1 468 aa9.8□□□□□ -0.84
SF3A1-207ENST00000471342 DEFB119Q8N690 84 aa9.8□□□□□ -0.84
SF3A1-207ENST00000471342 CLDN19Q8N6F1 224 aa9.8□□□□□ -0.84
SF3A1-207ENST00000471342 RASGEF1AQ8N9B8 481 aa9.8□□□□□ -0.84
SF3A1-207ENST00000471342 PRSS33Q8NF86 280 aa9.8□□□□□ -0.84
SF3A1-207ENST00000471342 EPS8L3Q8TE67 593 aaKnown RBP9.8□□□□□ -0.84
SF3A1-207ENST00000471342 CXorf40AQ8TE69 158 aa9.8□□□□□ -0.84
SF3A1-207ENST00000471342 GLYATL1Q969I3 302 aa9.8□□□□□ -0.84
SF3A1-207ENST00000471342 AP2M1Q96CW1 435 aa9.8□□□□□ -0.84
SF3A1-207ENST00000471342 NUS1Q96E22 293 aa9.8□□□□□ -0.84
SF3A1-207ENST00000471342 TTC25Q96NG3 672 aa9.8□□□□□ -0.84
SF3A1-207ENST00000471342 OLFM1Q99784 485 aa9.8□□□□□ -0.84
SF3A1-207ENST00000471342 LRFN3Q9BTN0 628 aa9.8□□□□□ -0.84
SF3A1-207ENST00000471342 FAM126AQ9BYI3 521 aaPredicted RBP9.8□□□□□ -0.84
SF3A1-207ENST00000471342 PCED1AQ9H1Q7 454 aa9.8□□□□□ -0.84
SF3A1-207ENST00000471342 FBXO6Q9NRD1 293 aaPredicted RBP9.8□□□□□ -0.84
SF3A1-207ENST00000471342 SLC23A2Q9UGH3 650 aa9.8□□□□□ -0.84
SF3A1-207ENST00000471342 LGALS13Q9UHV8 139 aa9.8□□□□□ -0.84
SF3A1-207ENST00000471342 ZNF180Q9UJW8 692 aa9.8□□□□□ -0.84
SF3A1-207ENST00000471342 IKZF3Q9UKT9 509 aa9.8□□□□□ -0.84
SF3A1-207ENST00000471342 PLAAQ9Y263 795 aa9.8□□□□□ -0.84
SF3A1-207ENST00000471342 SLC17A4Q9Y2C5 497 aa9.8□□□□□ -0.84
SF3A1-207ENST00000471342 MTO1Q9Y2Z2 717 aaKnown RBP9.8□□□□□ -0.84
SF3A1-207ENST00000471342 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.79□□□□□ -0.84
SF3A1-207ENST00000471342 IQCF5A8MTL0 148 aa9.79□□□□□ -0.84
SF3A1-207ENST00000471342 SLC31A1O15431 190 aa9.79□□□□□ -0.84
SF3A1-207ENST00000471342 LAMTOR5O43504 91 aa9.79□□□□□ -0.84
SF3A1-207ENST00000471342 GALR2O43603 387 aaPredicted RBP9.79□□□□□ -0.84
SF3A1-207ENST00000471342 SPAG6O75602 509 aa9.79□□□□□ -0.84
SF3A1-207ENST00000471342 PCDH8O95206 1070 aa9.79□□□□□ -0.84
SF3A1-207ENST00000471342 TSPAN12O95859 305 aa9.79□□□□□ -0.84
SF3A1-207ENST00000471342 ALDOAP04075 364 aaKnown RBP9.79□□□□□ -0.84
SF3A1-207ENST00000471342 ACADMP11310 421 aa9.79□□□□□ -0.84
SF3A1-207ENST00000471342 OGNP20774 298 aaKnown RBP9.79□□□□□ -0.84
SF3A1-207ENST00000471342 MCM3P25205 808 aa9.79□□□□□ -0.84
SF3A1-207ENST00000471342 HADHAP40939 763 aa9.79□□□□□ -0.84
SF3A1-207ENST00000471342 POLD2P49005 469 aa9.79□□□□□ -0.84
SF3A1-207ENST00000471342 CDK3Q00526 305 aa9.79□□□□□ -0.84
SF3A1-207ENST00000471342 PDE1BQ01064 536 aa9.79□□□□□ -0.84
SF3A1-207ENST00000471342 DLG1Q12959 904 aa9.79□□□□□ -0.84
SF3A1-207ENST00000471342 ANGPT1Q15389 498 aa9.79□□□□□ -0.84
SF3A1-207ENST00000471342 SHBQ15464 509 aa9.79□□□□□ -0.84
SF3A1-207ENST00000471342 TTC31Q49AM3 519 aaPredicted RBP9.79□□□□□ -0.84
SF3A1-207ENST00000471342 GPR33Q49SQ1 333 aa9.79□□□□□ -0.84
SF3A1-207ENST00000471342 LAYNQ6UX15 382 aa9.79□□□□□ -0.84
SF3A1-207ENST00000471342 CYHR1Q6ZMK1 362 aa9.79□□□□□ -0.84
SF3A1-207ENST00000471342 MACC1Q6ZN28 852 aa9.79□□□□□ -0.84
SF3A1-207ENST00000471342 TIFABQ6ZNK6 161 aa9.79□□□□□ -0.84
SF3A1-207ENST00000471342 SLC26A11Q86WA9 606 aa9.79□□□□□ -0.84
SF3A1-207ENST00000471342 CEP97Q8IW35 865 aa9.79□□□□□ -0.84
SF3A1-207ENST00000471342 TMEFF1Q8IYR6 380 aa9.79□□□□□ -0.84
SF3A1-207ENST00000471342 LILRA3Q8N6C8 439 aaPredicted RBP9.79□□□□□ -0.84
SF3A1-207ENST00000471342 DENND6BQ8NEG7 585 aa9.79□□□□□ -0.84
SF3A1-207ENST00000471342 GAB3Q8WWW8 586 aa9.79□□□□□ -0.84
SF3A1-207ENST00000471342 SCG3Q8WXD2 468 aaKnown RBP9.79□□□□□ -0.84
SF3A1-207ENST00000471342 ARL8AQ96BM9 186 aa9.79□□□□□ -0.84
SF3A1-207ENST00000471342 SLC6A18Q96N87 628 aa9.79□□□□□ -0.84
SF3A1-207ENST00000471342 GPR78Q96P69 363 aa9.79□□□□□ -0.84
SF3A1-207ENST00000471342 PAFAH2Q99487 392 aa9.79□□□□□ -0.84
SF3A1-207ENST00000471342 GPR22Q99680 433 aa9.79□□□□□ -0.84
SF3A1-207ENST00000471342 C1QTNF1Q9BXJ1 281 aa9.79□□□□□ -0.84
SF3A1-207ENST00000471342 CDH19Q9H159 772 aa9.79□□□□□ -0.84
SF3A1-207ENST00000471342 DYRK4Q9NR20 520 aa9.79□□□□□ -0.84
SF3A1-207ENST00000471342 LATS2Q9NRM7 1088 aa9.79□□□□□ -0.84
SF3A1-207ENST00000471342 PKD2L2Q9NZM6 624 aa9.79□□□□□ -0.84
SF3A1-207ENST00000471342 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.79□□□□□ -0.84
SF3A1-207ENST00000471342 ATXN10Q9UBB4 475 aa9.79□□□□□ -0.84
SF3A1-207ENST00000471342 NCKAP1Q9Y2A7 1128 aa9.79□□□□□ -0.84
SF3A1-207ENST00000471342 OR1A2Q9Y585 309 aa9.79□□□□□ -0.84
SF3A1-207ENST00000471342 HS3ST3A1Q9Y663 406 aa9.79□□□□□ -0.84
SF3A1-207ENST00000471342 CACNA1HO95180 2353 aa9.79□□□□□ -0.84
SF3A1-207ENST00000471342 A0A087WUV0 522 aaPredicted RBP9.78□□□□□ -0.84
SF3A1-207ENST00000471342 A0A1W2PPM1 405 aa9.78□□□□□ -0.84
SF3A1-207ENST00000471342 PRR23AA6NEV1 266 aa9.78□□□□□ -0.84
SF3A1-207ENST00000471342 FAM47DPA6NHR8 397 aa9.78□□□□□ -0.84
SF3A1-207ENST00000471342 SBK3P0C264 359 aa9.78□□□□□ -0.84
SF3A1-207ENST00000471342 ZNF8P17098 575 aaPredicted RBP9.78□□□□□ -0.84
SF3A1-207ENST00000471342 CD9P21926 228 aa9.78□□□□□ -0.84
SF3A1-207ENST00000471342 HNRNPA2B1P22626 353 aaKnown RBP9.78□□□□□ -0.84
SF3A1-207ENST00000471342 RPS3P23396 243 aaKnown RBP eCLIP9.78□□□□□ -0.842e-9■■□□□ 14.3
SF3A1-207ENST00000471342 CLCN7P51798 805 aa9.78□□□□□ -0.84
SF3A1-207ENST00000471342 LIMK2P53671 638 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms