RNA–Protein interactions for RNA: ENST00000470723.5

SND1-209, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-209ENST00000470723 DBX2Q6ZNG2 339 aa12.52□□□□□ -0.41
SND1-209ENST00000470723 ASCL5Q7RTU5 278 aa12.52□□□□□ -0.41
SND1-209ENST00000470723 DDHD1Q8NEL9 900 aa12.52□□□□□ -0.41
SND1-209ENST00000470723 HEXDCQ8WVB3 486 aa12.52□□□□□ -0.41
SND1-209ENST00000470723 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.52□□□□□ -0.41
SND1-209ENST00000470723 ULK4Q96C45 1275 aa12.52□□□□□ -0.41
SND1-209ENST00000470723 WDR92Q96MX6 357 aa12.52□□□□□ -0.41
SND1-209ENST00000470723 MYOCQ99972 504 aa12.52□□□□□ -0.41
SND1-209ENST00000470723 NUSAP1Q9BXS6 441 aaKnown RBP12.52□□□□□ -0.41
SND1-209ENST00000470723 RMI1Q9H9A7 625 aa12.52□□□□□ -0.41
SND1-209ENST00000470723 SEMA4GQ9NTN9 838 aa12.52□□□□□ -0.41
SND1-209ENST00000470723 MOCS1Q9NZB8 636 aa12.52□□□□□ -0.41
SND1-209ENST00000470723 VPS18Q9P253 973 aa12.52□□□□□ -0.41
SND1-209ENST00000470723 FNDC3AQ9Y2H6 1198 aaKnown RBP12.52□□□□□ -0.41
SND1-209ENST00000470723 SNX11Q9Y5W9 270 aa12.52□□□□□ -0.41
SND1-209ENST00000470723 RPS6KL1Q9Y6S9 549 aa12.52□□□□□ -0.41
SND1-209ENST00000470723 ARID1BQ8NFD5 2236 aaPredicted RBP12.52□□□□□ -0.41
SND1-209ENST00000470723 PLXNB3Q9ULL4 1909 aa12.51□□□□□ -0.41
SND1-209ENST00000470723 CCL22O00626 93 aa12.51□□□□□ -0.41
SND1-209ENST00000470723 CHUKO15111 745 aa12.51□□□□□ -0.41
SND1-209ENST00000470723 VEGFDO43915 354 aa12.51□□□□□ -0.41
SND1-209ENST00000470723 SLC25A14O95258 325 aaPredicted RBP12.51□□□□□ -0.41
SND1-209ENST00000470723 GOT2P00505 430 aaKnown RBP12.51□□□□□ -0.41
SND1-209ENST00000470723 SLC4A1P02730 911 aa12.51□□□□□ -0.41
SND1-209ENST00000470723 CSF2P04141 144 aa12.51□□□□□ -0.41
SND1-209ENST00000470723 IVLP07476 585 aa12.51□□□□□ -0.41
SND1-209ENST00000470723 GSTA2P09210 222 aa12.51□□□□□ -0.41
SND1-209ENST00000470723 RHOXF2BP0C7M4 288 aa12.51□□□□□ -0.41
SND1-209ENST00000470723 ZNF883P0CG24 379 aa12.51□□□□□ -0.41
SND1-209ENST00000470723 ITGALP20701 1170 aa12.51□□□□□ -0.41
SND1-209ENST00000470723 TNFRSF8P28908 595 aa12.51□□□□□ -0.41
SND1-209ENST00000470723 THOP1P52888 689 aa12.51□□□□□ -0.41
SND1-209ENST00000470723 TMEM115Q12893 351 aaPredicted RBP12.51□□□□□ -0.41
SND1-209ENST00000470723 GRIK2Q13002 908 aa12.51□□□□□ -0.41
SND1-209ENST00000470723 PDIA2Q13087 525 aaKnown RBP12.51□□□□□ -0.41
SND1-209ENST00000470723 HLA-BQ31612 363 aa12.51□□□□□ -0.41
SND1-209ENST00000470723 SPANXN3Q5MJ09 141 aa12.51□□□□□ -0.41
SND1-209ENST00000470723 LDLRAP1Q5SW96 308 aa12.51□□□□□ -0.41
SND1-209ENST00000470723 LYPLAL1Q5VWZ2 237 aa12.51□□□□□ -0.41
SND1-209ENST00000470723 ALS2CLQ60I27 953 aa12.51□□□□□ -0.41
SND1-209ENST00000470723 CASC4Q6P4E1 433 aa12.51□□□□□ -0.41
SND1-209ENST00000470723 ZNF449Q6P9G9 518 aa12.51□□□□□ -0.41
SND1-209ENST00000470723 CES3Q6UWW8 571 aa12.51□□□□□ -0.41
SND1-209ENST00000470723 CERS6Q6ZMG9 384 aa12.51□□□□□ -0.41
SND1-209ENST00000470723 CEP128Q6ZU80 1094 aa12.51□□□□□ -0.41
SND1-209ENST00000470723 PTAR1Q7Z6K3 402 aaPredicted RBP12.51□□□□□ -0.41
SND1-209ENST00000470723 LMNTD2Q8IXW0 634 aa12.51□□□□□ -0.41
SND1-209ENST00000470723 PIANPQ8IYJ0 282 aa12.51□□□□□ -0.41
SND1-209ENST00000470723 NXPE1Q8N323 547 aa12.51□□□□□ -0.41
SND1-209ENST00000470723 OXR1Q8N573 874 aa12.51□□□□□ -0.41
SND1-209ENST00000470723 OR56A4Q8NGH8 313 aa12.51□□□□□ -0.41
SND1-209ENST00000470723 OR6P1Q8NGX9 317 aa12.51□□□□□ -0.41
SND1-209ENST00000470723 IFT81Q8WYA0 676 aa12.51□□□□□ -0.41
SND1-209ENST00000470723 TCF12Q99081 682 aa12.51□□□□□ -0.41
SND1-209ENST00000470723 RHOXF2Q9BQY4 288 aa12.51□□□□□ -0.41
SND1-209ENST00000470723 ANKZF1Q9H8Y5 726 aa12.51□□□□□ -0.41
SND1-209ENST00000470723 PARD6AQ9NPB6 346 aa12.51□□□□□ -0.41
SND1-209ENST00000470723 NCDNQ9UBB6 729 aa12.51□□□□□ -0.41
SND1-209ENST00000470723 ZC3H7BQ9UGR2 993 aaKnown RBP12.51□□□□□ -0.41
SND1-209ENST00000470723 KLF15Q9UIH9 416 aa12.51□□□□□ -0.41
SND1-209ENST00000470723 PNMA8BQ9ULN7 279 aaPredicted RBP12.51□□□□□ -0.41
SND1-209ENST00000470723 MAD1L1Q9Y6D9 718 aa12.51□□□□□ -0.41
SND1-209ENST00000470723 DNMT3AQ9Y6K1 912 aaPredicted RBP12.51□□□□□ -0.41
SND1-209ENST00000470723 OAS3Q9Y6K5 1087 aaKnown RBP12.51□□□□□ -0.41
SND1-209ENST00000470723 SLC30A1Q9Y6M5 507 aa12.51□□□□□ -0.41
SND1-209ENST00000470723 ATXN2Q99700 1313 aaKnown RBP12.51□□□□□ -0.41
SND1-209ENST00000470723 CD3EAPO15446 510 aaKnown RBP12.5□□□□□ -0.41
SND1-209ENST00000470723 NUAK1O60285 661 aa12.5□□□□□ -0.41
SND1-209ENST00000470723 DNAJC6O75061 913 aa12.5□□□□□ -0.41
SND1-209ENST00000470723 BANF1O75531 89 aa12.5□□□□□ -0.41
SND1-209ENST00000470723 VAPBO95292 243 aa12.5□□□□□ -0.41
SND1-209ENST00000470723 CFIP05156 583 aa12.5□□□□□ -0.41
SND1-209ENST00000470723 NME1P15531 152 aaKnown RBP12.5□□□□□ -0.41
SND1-209ENST00000470723 PAMP19021 973 aa12.5□□□□□ -0.41
SND1-209ENST00000470723 MAGEA4P43358 317 aa12.5□□□□□ -0.41
SND1-209ENST00000470723 CDKN1CP49918 316 aaPredicted RBP12.5□□□□□ -0.41
SND1-209ENST00000470723 SRP54P61011 504 aaKnown RBP12.5□□□□□ -0.41
SND1-209ENST00000470723 PRAMEP78395 509 aa12.5□□□□□ -0.41
SND1-209ENST00000470723 SPEM2Q0P670 501 aa12.5□□□□□ -0.41
SND1-209ENST00000470723 ITIH4Q14624 930 aa12.5□□□□□ -0.41
SND1-209ENST00000470723 CRYMQ14894 314 aa12.5□□□□□ -0.41
SND1-209ENST00000470723 SHBQ15464 509 aa12.5□□□□□ -0.41
SND1-209ENST00000470723 GPRC6AQ5T6X5 926 aa12.5□□□□□ -0.41
SND1-209ENST00000470723 NEPROQ6NW34 567 aa12.5□□□□□ -0.41
SND1-209ENST00000470723 AFTPHQ6ULP2 937 aa12.5□□□□□ -0.41
SND1-209ENST00000470723 ENPP7Q6UWV6 458 aa12.5□□□□□ -0.41
SND1-209ENST00000470723 CCNI2Q6ZMN8 369 aaPredicted RBP12.5□□□□□ -0.41
SND1-209ENST00000470723 UNC5AQ6ZN44 842 aa12.5□□□□□ -0.41
SND1-209ENST00000470723 ADGRG6Q86SQ4 1221 aa12.5□□□□□ -0.41
SND1-209ENST00000470723 PARGQ86W56 976 aa12.5□□□□□ -0.41
SND1-209ENST00000470723 SDR16C5Q8N3Y7 309 aa12.5□□□□□ -0.41
SND1-209ENST00000470723 FBXO36Q8NEA4 188 aa12.5□□□□□ -0.41
SND1-209ENST00000470723 PYROXD1Q8WU10 500 aa12.5□□□□□ -0.41
SND1-209ENST00000470723 ELF4Q99607 663 aaPredicted RBP12.5□□□□□ -0.41
SND1-209ENST00000470723 TRIM56Q9BRZ2 755 aaKnown RBP12.5□□□□□ -0.41
SND1-209ENST00000470723 DNAAF2Q9NVR5 837 aaKnown RBP12.5□□□□□ -0.41
SND1-209ENST00000470723 ZDHHC3Q9NYG2 299 aa12.5□□□□□ -0.41
SND1-209ENST00000470723 ATXN10Q9UBB4 475 aa12.5□□□□□ -0.41
SND1-209ENST00000470723 MTRF1LQ9UGC7 380 aaKnown RBP12.5□□□□□ -0.41
SND1-209ENST00000470723 GPR34Q9UPC5 381 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms