RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 TMEM245Q9H330 911 aa18■□□□□ 0.47
SMC4-211ENST00000469858 KDM4CQ9H3R0 1056 aa18■□□□□ 0.47
SMC4-211ENST00000469858 SARS2Q9NP81 518 aaKnown RBP18■□□□□ 0.47
SMC4-211ENST00000469858 PKD2L2Q9NZM6 624 aa18■□□□□ 0.47
SMC4-211ENST00000469858 TRMT6Q9UJA5 497 aaKnown RBP18■□□□□ 0.47
SMC4-211ENST00000469858 PCDHB1Q9Y5F3 818 aa18■□□□□ 0.47
SMC4-211ENST00000469858 NUMBLQ9Y6R0 609 aa18■□□□□ 0.47
SMC4-211ENST00000469858 PIKFYVEQ9Y2I7 2098 aa18■□□□□ 0.47
SMC4-211ENST00000469858 H3BMM5 538 aa17.99■□□□□ 0.47
SMC4-211ENST00000469858 EIF2DP41214 584 aaKnown RBP17.99■□□□□ 0.47
SMC4-211ENST00000469858 IL12RB1P42701 662 aa17.99■□□□□ 0.47
SMC4-211ENST00000469858 METAP1P53582 386 aa17.99■□□□□ 0.47
SMC4-211ENST00000469858 GRIN2CQ14957 1233 aa17.99■□□□□ 0.47
SMC4-211ENST00000469858 LYPLAL1Q5VWZ2 237 aa17.99■□□□□ 0.47
SMC4-211ENST00000469858 PTRHD1Q6GMV3 140 aaKnown RBP17.99■□□□□ 0.47
SMC4-211ENST00000469858 NXPE1Q8N323 547 aa17.99■□□□□ 0.47
SMC4-211ENST00000469858 ERLEC1Q96DZ1 483 aa17.99■□□□□ 0.47
SMC4-211ENST00000469858 TTYH1Q9H313 450 aaPredicted RBP17.99■□□□□ 0.47
SMC4-211ENST00000469858 PRO3102Q9H379 93 aa17.99■□□□□ 0.47
SMC4-211ENST00000469858 CYP4F12Q9HCS2 524 aa17.99■□□□□ 0.47
SMC4-211ENST00000469858 RRP15Q9Y3B9 282 aaKnown RBP17.99■□□□□ 0.47
SMC4-211ENST00000469858 BRWD1Q9NSI6 2320 aa17.99■□□□□ 0.47
SMC4-211ENST00000469858 DCTN3O75935 186 aa17.99■□□□□ 0.47
SMC4-211ENST00000469858 KCNA5P22460 613 aa17.99■□□□□ 0.47
SMC4-211ENST00000469858 IGFBP4P22692 258 aa17.99■□□□□ 0.47
SMC4-211ENST00000469858 SOX9P48436 509 aa17.99■□□□□ 0.47
SMC4-211ENST00000469858 ASPHQ12797 758 aa17.99■□□□□ 0.47
SMC4-211ENST00000469858 ADGRE1Q14246 886 aa17.99■□□□□ 0.47
SMC4-211ENST00000469858 ELAVL3Q14576 367 aaKnown RBP17.99■□□□□ 0.47
SMC4-211ENST00000469858 ATP13A5Q4VNC0 1218 aa17.99■□□□□ 0.47
SMC4-211ENST00000469858 ZDHHC20Q5W0Z9 365 aa17.99■□□□□ 0.47
SMC4-211ENST00000469858 MTSS1LQ765P7 747 aa17.99■□□□□ 0.47
SMC4-211ENST00000469858 HSD11B1LQ7Z5J1 315 aa17.99■□□□□ 0.47
SMC4-211ENST00000469858 WDR75Q8IWA0 830 aaKnown RBP17.99■□□□□ 0.47
SMC4-211ENST00000469858 CLDN19Q8N6F1 224 aa17.99■□□□□ 0.47
SMC4-211ENST00000469858 SMRP1Q8NCR6 262 aa17.99■□□□□ 0.47
SMC4-211ENST00000469858 GIMAP7Q8NHV1 300 aa17.99■□□□□ 0.47
SMC4-211ENST00000469858 PIP4K2CQ8TBX8 421 aa17.99■□□□□ 0.47
SMC4-211ENST00000469858 CD200R1Q8TD46 325 aa17.99■□□□□ 0.47
SMC4-211ENST00000469858 HCAR2Q8TDS4 363 aa17.99■□□□□ 0.47
SMC4-211ENST00000469858 SUSD6Q92537 303 aa17.99■□□□□ 0.47
SMC4-211ENST00000469858 EXT2Q93063 718 aa17.99■□□□□ 0.47
SMC4-211ENST00000469858 PLXNA2O75051 1894 aa17.99■□□□□ 0.47
SMC4-211ENST00000469858 A8MT66 165 aa17.98■□□□□ 0.47
SMC4-211ENST00000469858 ARNTLO00327 626 aa17.98■□□□□ 0.47
SMC4-211ENST00000469858 UBOX5O94941 541 aa17.98■□□□□ 0.47
SMC4-211ENST00000469858 RPS3P23396 243 aaKnown RBP eCLIP17.98■□□□□ 0.477e-64■■■■■ 337.8
SMC4-211ENST00000469858 GRIA2P42262 883 aa17.98■□□□□ 0.47
SMC4-211ENST00000469858 KCNC1P48547 511 aa17.98■□□□□ 0.47
SMC4-211ENST00000469858 AQP5P55064 265 aa17.98■□□□□ 0.47
SMC4-211ENST00000469858 RALGDSQ12967 914 aa17.98■□□□□ 0.47
SMC4-211ENST00000469858 SETDB1Q15047 1291 aa17.98■□□□□ 0.47
SMC4-211ENST00000469858 EGFLAMQ63HQ2 1017 aa17.98■□□□□ 0.47
SMC4-211ENST00000469858 DPPA4Q7L190 304 aa17.98■□□□□ 0.47
SMC4-211ENST00000469858 CCNYL1Q8N7R7 359 aa17.98■□□□□ 0.47
SMC4-211ENST00000469858 LRRC37BQ96QE4 947 aa17.98■□□□□ 0.47
SMC4-211ENST00000469858 ACOX2Q99424 681 aa17.98■□□□□ 0.47
SMC4-211ENST00000469858 DERL2Q9GZP9 239 aa17.98■□□□□ 0.47
SMC4-211ENST00000469858 ABCG8Q9H221 673 aa17.98■□□□□ 0.47
SMC4-211ENST00000469858 PNPOQ9NVS9 261 aa17.98■□□□□ 0.47
SMC4-211ENST00000469858 CACNA2D2Q9NY47 1150 aa17.98■□□□□ 0.47
SMC4-211ENST00000469858 KCNK4Q9NYG8 393 aa17.98■□□□□ 0.47
SMC4-211ENST00000469858 GNPTGQ9UJJ9 305 aa17.98■□□□□ 0.47
SMC4-211ENST00000469858 ITM2BQ9Y287 266 aa17.98■□□□□ 0.47
SMC4-211ENST00000469858 AGAP14A8MT82 685 aa17.97■□□□□ 0.47
SMC4-211ENST00000469858 APODP05090 189 aa17.97■□□□□ 0.47
SMC4-211ENST00000469858 CHRNGP07510 517 aa17.97■□□□□ 0.47
SMC4-211ENST00000469858 CD9P21926 228 aa17.97■□□□□ 0.47
SMC4-211ENST00000469858 MMP12P39900 470 aa17.97■□□□□ 0.47
SMC4-211ENST00000469858 CCR10P46092 362 aa17.97■□□□□ 0.47
SMC4-211ENST00000469858 RCN2Q14257 317 aa17.97■□□□□ 0.47
SMC4-211ENST00000469858 OR4D1Q15615 310 aa17.97■□□□□ 0.47
SMC4-211ENST00000469858 ERAP2Q6P179 960 aa17.97■□□□□ 0.47
SMC4-211ENST00000469858 Q6ZVL8 140 aa17.97■□□□□ 0.47
SMC4-211ENST00000469858 CPNE9Q8IYJ1 553 aa17.97■□□□□ 0.47
SMC4-211ENST00000469858 NKAPQ8N5F7 415 aaKnown RBP17.97■□□□□ 0.47
SMC4-211ENST00000469858 ZNF781Q8N8C0 355 aa17.97■□□□□ 0.47
SMC4-211ENST00000469858 ERP27Q96DN0 273 aa17.97■□□□□ 0.47
SMC4-211ENST00000469858 CCDC126Q96EE4 140 aa17.97■□□□□ 0.47
SMC4-211ENST00000469858 PHF21BQ96EK2 531 aa17.97■□□□□ 0.47
SMC4-211ENST00000469858 SPATA16Q9BXB7 569 aa17.97■□□□□ 0.47
SMC4-211ENST00000469858 DRC3Q9H069 523 aa17.97■□□□□ 0.47
SMC4-211ENST00000469858 THAP10Q9P2Z0 257 aaPredicted RBP17.97■□□□□ 0.47
SMC4-211ENST00000469858 HCN2Q9UL51 889 aa17.97■□□□□ 0.47
SMC4-211ENST00000469858 PPM1HQ9ULR3 514 aa17.97■□□□□ 0.47
SMC4-211ENST00000469858 PRSS21Q9Y6M0 314 aa17.97■□□□□ 0.47
SMC4-211ENST00000469858 UNC80Q8N2C7 3258 aa17.97■□□□□ 0.47
SMC4-211ENST00000469858 F8W8V4 182 aa17.97■□□□□ 0.47
SMC4-211ENST00000469858 IPO13O94829 963 aaKnown RBP17.97■□□□□ 0.47
SMC4-211ENST00000469858 EPHX1P07099 455 aa17.97■□□□□ 0.47
SMC4-211ENST00000469858 ITGB6P18564 788 aa17.97■□□□□ 0.47
SMC4-211ENST00000469858 ETV3P41162 512 aa17.97■□□□□ 0.47
SMC4-211ENST00000469858 SKIV2L2P42285 1042 aaKnown RBP17.97■□□□□ 0.47
SMC4-211ENST00000469858 CLCN7P51798 805 aa17.97■□□□□ 0.47
SMC4-211ENST00000469858 PREPLQ4J6C6 727 aaPredicted RBP17.97■□□□□ 0.47
SMC4-211ENST00000469858 UGT3A1Q6NUS8 523 aa17.97■□□□□ 0.47
SMC4-211ENST00000469858 TRIM67Q6ZTA4 783 aa17.97■□□□□ 0.47
SMC4-211ENST00000469858 TMIEQ8NEW7 156 aa17.97■□□□□ 0.47
SMC4-211ENST00000469858 AGR3Q8TD06 166 aa17.97■□□□□ 0.47
SMC4-211ENST00000469858 ARRDC3Q96B67 414 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms