RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 FBXO8Q9NRD0 319 aa12.13□□□□□ -0.47
HDAC3-204ENST00000469207 KLC4Q9NSK0 619 aa12.13□□□□□ -0.47
HDAC3-204ENST00000469207 OGFRQ9NZT2 677 aa12.13□□□□□ -0.47
HDAC3-204ENST00000469207 SLC30A1Q9Y6M5 507 aa12.13□□□□□ -0.47
HDAC3-204ENST00000469207 SPENQ96T58 3664 aaKnown RBP12.13□□□□□ -0.47
HDAC3-204ENST00000469207 MAST4O15021 2626 aa12.13□□□□□ -0.47
HDAC3-204ENST00000469207 SPTA1P02549 2419 aa12.12□□□□□ -0.47
HDAC3-204ENST00000469207 SMTNL1A8MU46 457 aa12.12□□□□□ -0.47
HDAC3-204ENST00000469207 ANKRD66B4E2M5 251 aa12.12□□□□□ -0.47
HDAC3-204ENST00000469207 MYO1FO00160 1098 aa12.12□□□□□ -0.47
HDAC3-204ENST00000469207 KCNK1O00180 336 aa12.12□□□□□ -0.47
HDAC3-204ENST00000469207 POLR1CO15160 346 aaPredicted RBP12.12□□□□□ -0.47
HDAC3-204ENST00000469207 GRID2O43424 1007 aa12.12□□□□□ -0.47
HDAC3-204ENST00000469207 NUAK1O60285 661 aa12.12□□□□□ -0.47
HDAC3-204ENST00000469207 FURINP09958 794 aa12.12□□□□□ -0.47
HDAC3-204ENST00000469207 F3P13726 295 aa12.12□□□□□ -0.47
HDAC3-204ENST00000469207 NR1D1P20393 614 aa12.12□□□□□ -0.47
HDAC3-204ENST00000469207 MAP4P27816 1152 aaKnown RBP12.12□□□□□ -0.47
HDAC3-204ENST00000469207 SEPHS1P49903 392 aa12.12□□□□□ -0.47
HDAC3-204ENST00000469207 RAB15P59190 212 aa12.12□□□□□ -0.47
HDAC3-204ENST00000469207 SH3BP2P78314 561 aa12.12□□□□□ -0.47
HDAC3-204ENST00000469207 FOXM1Q08050 763 aa12.12□□□□□ -0.47
HDAC3-204ENST00000469207 CDC20Q12834 499 aa12.12□□□□□ -0.47
HDAC3-204ENST00000469207 GALNT3Q14435 633 aa12.12□□□□□ -0.47
HDAC3-204ENST00000469207 IFI16Q16666 785 aaKnown RBP12.12□□□□□ -0.47
HDAC3-204ENST00000469207 PLA2G4EQ3MJ16 856 aa12.12□□□□□ -0.47
HDAC3-204ENST00000469207 CEACAM20Q6UY09 585 aa12.12□□□□□ -0.47
HDAC3-204ENST00000469207 SLC9B2Q86UD5 537 aa12.12□□□□□ -0.47
HDAC3-204ENST00000469207 LRRC49Q8IUZ0 686 aa12.12□□□□□ -0.47
HDAC3-204ENST00000469207 CNTD1Q8N815 330 aa12.12□□□□□ -0.47
HDAC3-204ENST00000469207 CCNYQ8ND76 341 aa12.12□□□□□ -0.47
HDAC3-204ENST00000469207 GPR26Q8NDV2 337 aa12.12□□□□□ -0.47
HDAC3-204ENST00000469207 STARD8Q92502 1023 aa12.12□□□□□ -0.47
HDAC3-204ENST00000469207 ELMO2Q96JJ3 720 aa12.12□□□□□ -0.47
HDAC3-204ENST00000469207 TSGA13Q96PP4 275 aa12.12□□□□□ -0.47
HDAC3-204ENST00000469207 GBP4Q96PP9 640 aa12.12□□□□□ -0.47
HDAC3-204ENST00000469207 LYSMD1Q96S90 227 aa12.12□□□□□ -0.47
HDAC3-204ENST00000469207 BPIFA3Q9BQP9 254 aa12.12□□□□□ -0.47
HDAC3-204ENST00000469207 MLPHQ9BV36 600 aaPredicted RBP12.12□□□□□ -0.47
HDAC3-204ENST00000469207 NAT10Q9H0A0 1025 aaKnown RBP12.12□□□□□ -0.47
HDAC3-204ENST00000469207 OR2AG1Q9H205 316 aa12.12□□□□□ -0.47
HDAC3-204ENST00000469207 VPS18Q9P253 973 aa12.12□□□□□ -0.47
HDAC3-204ENST00000469207 ZNF624Q9P2J8 865 aaPredicted RBP12.12□□□□□ -0.47
HDAC3-204ENST00000469207 CPNE7Q9UBL6 633 aa12.12□□□□□ -0.47
HDAC3-204ENST00000469207 SHOC2Q9UQ13 582 aa12.12□□□□□ -0.47
HDAC3-204ENST00000469207 NAV2Q8IVL1 2488 aa12.12□□□□□ -0.47
HDAC3-204ENST00000469207 KIF1CO43896 1103 aaKnown RBP12.11□□□□□ -0.47
HDAC3-204ENST00000469207 MTX2O75431 263 aa12.11□□□□□ -0.47
HDAC3-204ENST00000469207 SERPINC1P01008 464 aa12.11□□□□□ -0.47
HDAC3-204ENST00000469207 SLC4A1P02730 911 aa12.11□□□□□ -0.47
HDAC3-204ENST00000469207 PYGLP06737 847 aa12.11□□□□□ -0.47
HDAC3-204ENST00000469207 SLC19A1P41440 591 aa12.11□□□□□ -0.47
HDAC3-204ENST00000469207 LEPRP48357 1165 aaKnown RBP12.11□□□□□ -0.47
HDAC3-204ENST00000469207 ZBTB17Q13105 803 aa12.11□□□□□ -0.47
HDAC3-204ENST00000469207 IQCB1Q15051 598 aa12.11□□□□□ -0.47
HDAC3-204ENST00000469207 SEPT7Q16181 437 aaKnown RBP12.11□□□□□ -0.47
HDAC3-204ENST00000469207 CRTC3Q6UUV7 619 aa12.11□□□□□ -0.47
HDAC3-204ENST00000469207 TMEM135Q86UB9 458 aa12.11□□□□□ -0.47
HDAC3-204ENST00000469207 C9orf43Q8TAL5 461 aaPredicted RBP12.11□□□□□ -0.47
HDAC3-204ENST00000469207 RAPGEF5Q92565 580 aa12.11□□□□□ -0.47
HDAC3-204ENST00000469207 TEFMQ96QE5 360 aaKnown RBP12.11□□□□□ -0.47
HDAC3-204ENST00000469207 SPATA16Q9BXB7 569 aa12.11□□□□□ -0.47
HDAC3-204ENST00000469207 PACSIN1Q9BY11 444 aa12.11□□□□□ -0.47
HDAC3-204ENST00000469207 OSGEPL1Q9H4B0 414 aa12.11□□□□□ -0.47
HDAC3-204ENST00000469207 PKD2L2Q9NZM6 624 aa12.11□□□□□ -0.47
HDAC3-204ENST00000469207 RCOR3Q9P2K3 495 aaPredicted RBP12.11□□□□□ -0.47
HDAC3-204ENST00000469207 TRIM10Q9UDY6 481 aa12.11□□□□□ -0.47
HDAC3-204ENST00000469207 DNAJC16Q9Y2G8 782 aa12.11□□□□□ -0.47
HDAC3-204ENST00000469207 TMEM184BQ9Y519 407 aaPredicted RBP12.11□□□□□ -0.47
HDAC3-204ENST00000469207 ADGRG1Q9Y653 693 aa12.11□□□□□ -0.47
HDAC3-204ENST00000469207 DOPEY2Q9Y3R5 2298 aa12.11□□□□□ -0.47
HDAC3-204ENST00000469207 SLC25A14O95258 325 aaPredicted RBP12.1□□□□□ -0.47
HDAC3-204ENST00000469207 DLGAP3O95886 979 aa12.1□□□□□ -0.47
HDAC3-204ENST00000469207 SERPING1P05155 500 aa12.1□□□□□ -0.47
HDAC3-204ENST00000469207 TCN2P20062 427 aa12.1□□□□□ -0.47
HDAC3-204ENST00000469207 CES1P23141 567 aa12.1□□□□□ -0.47
HDAC3-204ENST00000469207 RPL10P27635 214 aaKnown RBP12.1□□□□□ -0.47
HDAC3-204ENST00000469207 PBX1P40424 430 aa12.1□□□□□ -0.47
HDAC3-204ENST00000469207 CASRP41180 1078 aa12.1□□□□□ -0.47
HDAC3-204ENST00000469207 UBE2IP63279 158 aaKnown RBP12.1□□□□□ -0.47
HDAC3-204ENST00000469207 FOXK1P85037 733 aa12.1□□□□□ -0.47
HDAC3-204ENST00000469207 ABHD18Q0P651 414 aa12.1□□□□□ -0.47
HDAC3-204ENST00000469207 UBAP2LQ14157 1087 aaKnown RBP12.1□□□□□ -0.47
HDAC3-204ENST00000469207 ERV3-1Q14264 604 aa12.1□□□□□ -0.47
HDAC3-204ENST00000469207 HADHQ16836 314 aaKnown RBP12.1□□□□□ -0.47
HDAC3-204ENST00000469207 KHDC1Q4VXA5 237 aaKnown RBP12.1□□□□□ -0.47
HDAC3-204ENST00000469207 TIGD7Q6NT04 549 aaPredicted RBP12.1□□□□□ -0.47
HDAC3-204ENST00000469207 ALKBH5Q6P6C2 394 aaKnown RBP12.1□□□□□ -0.47
HDAC3-204ENST00000469207 ADGRG6Q86SQ4 1221 aa12.1□□□□□ -0.47
HDAC3-204ENST00000469207 CCDC13Q8IYE1 715 aa12.1□□□□□ -0.47
HDAC3-204ENST00000469207 GALNT6Q8NCL4 622 aa12.1□□□□□ -0.47
HDAC3-204ENST00000469207 CCHCR1Q8TD31 782 aa12.1□□□□□ -0.47
HDAC3-204ENST00000469207 KIAA1143Q96AT1 154 aaPredicted RBP12.1□□□□□ -0.47
HDAC3-204ENST00000469207 SH3KBP1Q96B97 665 aa12.1□□□□□ -0.47
HDAC3-204ENST00000469207 C9orf72Q96LT7 481 aa12.1□□□□□ -0.47
HDAC3-204ENST00000469207 CATSPER2Q96P56 530 aa12.1□□□□□ -0.47
HDAC3-204ENST00000469207 TGM7Q96PF1 710 aa12.1□□□□□ -0.47
HDAC3-204ENST00000469207 CARD9Q9H257 536 aa12.1□□□□□ -0.47
HDAC3-204ENST00000469207 AKIRIN1Q9H9L7 192 aaPredicted RBP12.1□□□□□ -0.47
HDAC3-204ENST00000469207 SIDT1Q9NXL6 827 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms