RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 TRAF3IP1Q8TDR0 691 aaPredicted RBP24.22■■□□□ 1.47
PTCH1-210ENST00000468211 RNF25Q96BH1 459 aaPredicted RBP24.22■■□□□ 1.47
PTCH1-210ENST00000468211 TADA1Q96BN2 335 aa24.22■■□□□ 1.47
PTCH1-210ENST00000468211 DPYSL5Q9BPU6 564 aa24.22■■□□□ 1.47
PTCH1-210ENST00000468211 ZFYVE1Q9HBF4 777 aa24.22■■□□□ 1.47
PTCH1-210ENST00000468211 ABHD10Q9NUJ1 306 aa24.22■■□□□ 1.47
PTCH1-210ENST00000468211 ADGRG1Q9Y653 693 aa24.22■■□□□ 1.47
PTCH1-210ENST00000468211 A8MU76 341 aa24.21■■□□□ 1.47
PTCH1-210ENST00000468211 GRID2O43424 1007 aa24.21■■□□□ 1.47
PTCH1-210ENST00000468211 NUAK1O60285 661 aa24.21■■□□□ 1.47
PTCH1-210ENST00000468211 MTA2O94776 668 aa24.21■■□□□ 1.47
PTCH1-210ENST00000468211 KRT1P04264 644 aa24.21■■□□□ 1.47
PTCH1-210ENST00000468211 NOP2P46087 812 aaKnown RBP24.21■■□□□ 1.47
PTCH1-210ENST00000468211 DYNLT1P63172 113 aa24.21■■□□□ 1.47
PTCH1-210ENST00000468211 PCSK7Q16549 785 aa24.21■■□□□ 1.47
PTCH1-210ENST00000468211 SNAP47Q5SQN1 464 aa24.21■■□□□ 1.47
PTCH1-210ENST00000468211 BMPERQ8N8U9 685 aa24.21■■□□□ 1.47
PTCH1-210ENST00000468211 OR10G6Q8NH81 332 aa24.21■■□□□ 1.47
PTCH1-210ENST00000468211 SPATA22Q8NHS9 363 aa24.21■■□□□ 1.47
PTCH1-210ENST00000468211 AHCYL2Q96HN2 611 aaKnown RBP24.21■■□□□ 1.47
PTCH1-210ENST00000468211 SPATA16Q9BXB7 569 aa24.21■■□□□ 1.47
PTCH1-210ENST00000468211 RMI1Q9H9A7 625 aa24.21■■□□□ 1.47
PTCH1-210ENST00000468211 NHEJ1Q9H9Q4 299 aaPredicted RBP24.21■■□□□ 1.47
PTCH1-210ENST00000468211 SARS2Q9NP81 518 aaKnown RBP24.21■■□□□ 1.47
PTCH1-210ENST00000468211 SLC39A1Q9NY26 324 aa24.21■■□□□ 1.47
PTCH1-210ENST00000468211 TLN1Q9Y490 2541 aaKnown RBP24.21■■□□□ 1.47
PTCH1-210ENST00000468211 BSNQ9UPA5 3926 aa24.21■■□□□ 1.47
PTCH1-210ENST00000468211 EFCAB7A8K855 629 aa24.2■■□□□ 1.46
PTCH1-210ENST00000468211 DUX1O43812 170 aa24.2■■□□□ 1.46
PTCH1-210ENST00000468211 SLC4A1P02730 911 aa24.2■■□□□ 1.46
PTCH1-210ENST00000468211 ITGB2P05107 769 aa24.2■■□□□ 1.46
PTCH1-210ENST00000468211 UGT1A3P35503 534 aa24.2■■□□□ 1.46
PTCH1-210ENST00000468211 ARHGAP25P42331 645 aa24.2■■□□□ 1.46
PTCH1-210ENST00000468211 PPM1FP49593 454 aaPredicted RBP24.2■■□□□ 1.46
PTCH1-210ENST00000468211 TRIM14Q14142 442 aa24.2■■□□□ 1.46
PTCH1-210ENST00000468211 TBR1Q16650 682 aa24.2■■□□□ 1.46
PTCH1-210ENST00000468211 ANKS6Q68DC2 871 aa24.2■■□□□ 1.46
PTCH1-210ENST00000468211 ARHGAP22Q7Z5H3 698 aa24.2■■□□□ 1.46
PTCH1-210ENST00000468211 TMC3Q7Z5M5 1100 aa24.2■■□□□ 1.46
PTCH1-210ENST00000468211 NT5DC3Q86UY8 548 aa24.2■■□□□ 1.46
PTCH1-210ENST00000468211 VSIG1Q86XK7 387 aa24.2■■□□□ 1.46
PTCH1-210ENST00000468211 FAM129CQ86XR2 697 aa24.2■■□□□ 1.46
PTCH1-210ENST00000468211 RFX6Q8HWS3 928 aa24.2■■□□□ 1.46
PTCH1-210ENST00000468211 VSTM4Q8IW00 320 aa24.2■■□□□ 1.46
PTCH1-210ENST00000468211 DDA1Q9BW61 102 aa24.2■■□□□ 1.46
PTCH1-210ENST00000468211 ZMYND15Q9H091 742 aa24.2■■□□□ 1.46
PTCH1-210ENST00000468211 SLC25A51Q9H1U9 297 aa24.2■■□□□ 1.46
PTCH1-210ENST00000468211 OR2AG1Q9H205 316 aa24.2■■□□□ 1.46
PTCH1-210ENST00000468211 CARD9Q9H257 536 aa24.2■■□□□ 1.46
PTCH1-210ENST00000468211 PRDM8Q9NQV8 689 aa24.2■■□□□ 1.46
PTCH1-210ENST00000468211 ZNHIT6Q9NWK9 470 aaKnown RBP24.2■■□□□ 1.46
PTCH1-210ENST00000468211 ZNF711Q9Y462 761 aa24.2■■□□□ 1.46
PTCH1-210ENST00000468211 ZNF106Q9H2Y7 1883 aaKnown RBP24.19■■□□□ 1.46
PTCH1-210ENST00000468211 MT-CYBP00156 380 aaPredicted RBP24.19■■□□□ 1.46
PTCH1-210ENST00000468211 FAM87AP0C7U9 286 aa24.19■■□□□ 1.46
PTCH1-210ENST00000468211 F3P13726 295 aa24.19■■□□□ 1.46
PTCH1-210ENST00000468211 TNNT1P13805 278 aa24.19■■□□□ 1.46
PTCH1-210ENST00000468211 PDK1Q15118 436 aa24.19■■□□□ 1.46
PTCH1-210ENST00000468211 MFSD7Q6UXD7 560 aa24.19■■□□□ 1.46
PTCH1-210ENST00000468211 ADGRG6Q86SQ4 1221 aa24.19■■□□□ 1.46
PTCH1-210ENST00000468211 NCSTNQ92542 709 aa24.19■■□□□ 1.46
PTCH1-210ENST00000468211 TBC1D10AQ9BXI6 508 aa24.19■■□□□ 1.46
PTCH1-210ENST00000468211 MAK16Q9BXY0 300 aaKnown RBP24.19■■□□□ 1.46
PTCH1-210ENST00000468211 MAGEE1Q9HCI5 957 aa24.19■■□□□ 1.46
PTCH1-210ENST00000468211 SCHIP1Q9P0W5 487 aaPredicted RBP24.19■■□□□ 1.46
PTCH1-210ENST00000468211 SAE1Q9UBE0 346 aaPredicted RBP24.19■■□□□ 1.46
PTCH1-210ENST00000468211 SLC23A2Q9UGH3 650 aa24.19■■□□□ 1.46
PTCH1-210ENST00000468211 SPO11Q9Y5K1 396 aa24.19■■□□□ 1.46
PTCH1-210ENST00000468211 MYO18BQ8IUG5 2567 aa24.19■■□□□ 1.46
PTCH1-210ENST00000468211 B4E171 279 aa24.18■■□□□ 1.46
PTCH1-210ENST00000468211 AURKAO14965 403 aa24.18■■□□□ 1.46
PTCH1-210ENST00000468211 CBFA2T2O43439 604 aa24.18■■□□□ 1.46
PTCH1-210ENST00000468211 MFAP3LO75121 409 aa24.18■■□□□ 1.46
PTCH1-210ENST00000468211 SLC25A14O95258 325 aaPredicted RBP24.18■■□□□ 1.46
PTCH1-210ENST00000468211 ITGB6P18564 788 aa24.18■■□□□ 1.46
PTCH1-210ENST00000468211 TSPAN7P41732 249 aa24.18■■□□□ 1.46
PTCH1-210ENST00000468211 CDK18Q07002 472 aa24.18■■□□□ 1.46
PTCH1-210ENST00000468211 NFATC3Q12968 1075 aa24.18■■□□□ 1.46
PTCH1-210ENST00000468211 ZNF569Q5MCW4 686 aa24.18■■□□□ 1.46
PTCH1-210ENST00000468211 LRRC38Q5VT99 294 aa24.18■■□□□ 1.46
PTCH1-210ENST00000468211 WDR74Q6RFH5 385 aaPredicted RBP24.18■■□□□ 1.46
PTCH1-210ENST00000468211 RHOT2Q8IXI1 618 aa24.18■■□□□ 1.46
PTCH1-210ENST00000468211 CCDC42Q96M95 316 aa24.18■■□□□ 1.46
PTCH1-210ENST00000468211 HERPUD2Q9BSE4 406 aa24.18■■□□□ 1.46
PTCH1-210ENST00000468211 SLC12A9Q9BXP2 914 aa24.18■■□□□ 1.46
PTCH1-210ENST00000468211 GLOD4Q9HC38 313 aa24.18■■□□□ 1.46
PTCH1-210ENST00000468211 TRIM39Q9HCM9 518 aa24.18■■□□□ 1.46
PTCH1-210ENST00000468211 KLC4Q9NSK0 619 aa24.18■■□□□ 1.46
PTCH1-210ENST00000468211 PPP1R12AO14974 1030 aaPredicted RBP24.17■■□□□ 1.46
PTCH1-210ENST00000468211 LIFP15018 202 aa24.17■■□□□ 1.46
PTCH1-210ENST00000468211 BPIP17213 487 aa24.17■■□□□ 1.46
PTCH1-210ENST00000468211 MAPK9P45984 424 aa24.17■■□□□ 1.46
PTCH1-210ENST00000468211 DCDC1P59894 354 aa24.17■■□□□ 1.46
PTCH1-210ENST00000468211 LLGL1Q15334 1064 aa24.17■■□□□ 1.46
PTCH1-210ENST00000468211 PLA2G4EQ3MJ16 856 aa24.17■■□□□ 1.46
PTCH1-210ENST00000468211 KHDC1Q4VXA5 237 aaKnown RBP24.17■■□□□ 1.46
PTCH1-210ENST00000468211 CRTC3Q6UUV7 619 aa24.17■■□□□ 1.46
PTCH1-210ENST00000468211 SLC9B2Q86UD5 537 aa24.17■■□□□ 1.46
PTCH1-210ENST00000468211 TRAM1L1Q8N609 369 aa24.17■■□□□ 1.46
PTCH1-210ENST00000468211 ZSCAN1Q8NBB4 408 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms