RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 GSTM4Q03013 218 aa10.11□□□□□ -0.79
MSH5-213ENST00000468136 RIPK1Q13546 671 aa10.11□□□□□ -0.79
MSH5-213ENST00000468136 ELAVL3Q14576 367 aaKnown RBP10.11□□□□□ -0.79
MSH5-213ENST00000468136 ZNF460Q14592 562 aa10.11□□□□□ -0.79
MSH5-213ENST00000468136 PTPRCAPQ14761 206 aa10.11□□□□□ -0.79
MSH5-213ENST00000468136 CBX2Q14781 532 aaPredicted RBP10.11□□□□□ -0.79
MSH5-213ENST00000468136 GEN1Q17RS7 908 aa10.11□□□□□ -0.79
MSH5-213ENST00000468136 RARS2Q5T160 578 aaKnown RBP10.11□□□□□ -0.79
MSH5-213ENST00000468136 FAM109BQ6ICB4 259 aaPredicted RBP10.11□□□□□ -0.79
MSH5-213ENST00000468136 PAQR3Q6TCH7 311 aa10.11□□□□□ -0.79
MSH5-213ENST00000468136 FRMD7Q6ZUT3 714 aa10.11□□□□□ -0.79
MSH5-213ENST00000468136 Q6ZVU0 165 aa10.11□□□□□ -0.79
MSH5-213ENST00000468136 MTSS1LQ765P7 747 aa10.11□□□□□ -0.79
MSH5-213ENST00000468136 DPPA4Q7L190 304 aa10.11□□□□□ -0.79
MSH5-213ENST00000468136 LDB1Q86U70 411 aaPredicted RBP10.11□□□□□ -0.79
MSH5-213ENST00000468136 NLRP8Q86W28 1048 aa10.11□□□□□ -0.79
MSH5-213ENST00000468136 PIANPQ8IYJ0 282 aa10.11□□□□□ -0.79
MSH5-213ENST00000468136 TXNDC5Q8NBS9 432 aaKnown RBP10.11□□□□□ -0.79
MSH5-213ENST00000468136 OR8D1Q8WZ84 308 aa10.11□□□□□ -0.79
MSH5-213ENST00000468136 RAB7BQ96AH8 199 aa10.11□□□□□ -0.79
MSH5-213ENST00000468136 ELSPBP1Q96BH3 223 aa10.11□□□□□ -0.79
MSH5-213ENST00000468136 NECTIN4Q96NY8 510 aa10.11□□□□□ -0.79
MSH5-213ENST00000468136 ATOH8Q96SQ7 321 aa10.11□□□□□ -0.79
MSH5-213ENST00000468136 COPS8Q99627 209 aa10.11□□□□□ -0.79
MSH5-213ENST00000468136 GPR21Q99679 349 aa10.11□□□□□ -0.79
MSH5-213ENST00000468136 ZSCAN5AQ9BUG6 496 aa10.11□□□□□ -0.79
MSH5-213ENST00000468136 CIPCQ9C0C6 399 aa10.11□□□□□ -0.79
MSH5-213ENST00000468136 C20orf27Q9GZN8 174 aa10.11□□□□□ -0.79
MSH5-213ENST00000468136 C1orf21Q9H246 121 aa10.11□□□□□ -0.79
MSH5-213ENST00000468136 ALG9Q9H6U8 611 aa10.11□□□□□ -0.79
MSH5-213ENST00000468136 BPIFA1Q9NP55 256 aa10.11□□□□□ -0.79
MSH5-213ENST00000468136 SPATS2LQ9NUQ6 558 aaKnown RBP10.11□□□□□ -0.79
MSH5-213ENST00000468136 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.11□□□□□ -0.79
MSH5-213ENST00000468136 NUDT4Q9NZJ9 180 aa10.11□□□□□ -0.79
MSH5-213ENST00000468136 TAGLN3Q9UI15 199 aa10.11□□□□□ -0.79
MSH5-213ENST00000468136 RNF112Q9ULX5 631 aa10.11□□□□□ -0.79
MSH5-213ENST00000468136 CDYLQ9Y232 598 aa10.11□□□□□ -0.79
MSH5-213ENST00000468136 WASF2Q9Y6W5 498 aa10.11□□□□□ -0.79
MSH5-213ENST00000468136 ANKRD36A6QL64 1941 aa10.11□□□□□ -0.79
MSH5-213ENST00000468136 IGLV3-16A0A075B6K0 115 aa10.1□□□□□ -0.79
MSH5-213ENST00000468136 NPIPB15A6NHN6 443 aaPredicted RBP10.1□□□□□ -0.79
MSH5-213ENST00000468136 C1QTNF3-AMACRE9PGA6 284 aa10.1□□□□□ -0.79
MSH5-213ENST00000468136 ZNF195O14628 629 aa10.1□□□□□ -0.79
MSH5-213ENST00000468136 VPS4BO75351 444 aa10.1□□□□□ -0.79
MSH5-213ENST00000468136 ECI2O75521 394 aa10.1□□□□□ -0.79
MSH5-213ENST00000468136 S100BP04271 92 aaPredicted RBP10.1□□□□□ -0.79
MSH5-213ENST00000468136 KITP10721 976 aa10.1□□□□□ -0.79
MSH5-213ENST00000468136 SP100P23497 879 aaPredicted RBP10.1□□□□□ -0.79
MSH5-213ENST00000468136 ITGB7P26010 798 aa10.1□□□□□ -0.79
MSH5-213ENST00000468136 NUMBP49757 651 aa10.1□□□□□ -0.79
MSH5-213ENST00000468136 IDH3AP50213 366 aa10.1□□□□□ -0.79
MSH5-213ENST00000468136 CLCN7P51798 805 aa10.1□□□□□ -0.79
MSH5-213ENST00000468136 ALDH18A1P54886 795 aaKnown RBP10.1□□□□□ -0.79
MSH5-213ENST00000468136 INHBCP55103 352 aa10.1□□□□□ -0.79
MSH5-213ENST00000468136 TIAL1Q01085 375 aaKnown RBP eCLIP10.1□□□□□ -0.79
MSH5-213ENST00000468136 CTC1Q2NKJ3 1217 aa10.1□□□□□ -0.79
MSH5-213ENST00000468136 ZNF284Q2VY69 593 aa10.1□□□□□ -0.79
MSH5-213ENST00000468136 HNRNPA1L2Q32P51 320 aaKnown RBP10.1□□□□□ -0.79
MSH5-213ENST00000468136 DNAL1Q4LDG9 190 aa10.1□□□□□ -0.79
MSH5-213ENST00000468136 CTSL3PQ5NE16 218 aa10.1□□□□□ -0.79
MSH5-213ENST00000468136 ZNF678Q5SXM1 525 aa10.1□□□□□ -0.79
MSH5-213ENST00000468136 FAM46CQ5VWP2 391 aa10.1□□□□□ -0.79
MSH5-213ENST00000468136 CES4AQ5XG92 561 aa10.1□□□□□ -0.79
MSH5-213ENST00000468136 LRRC66Q68CR7 880 aa10.1□□□□□ -0.79
MSH5-213ENST00000468136 ANKS6Q68DC2 871 aa10.1□□□□□ -0.79
MSH5-213ENST00000468136 TMEM207Q6UWW9 146 aa10.1□□□□□ -0.79
MSH5-213ENST00000468136 FAM151BQ6UXP7 276 aa10.1□□□□□ -0.79
MSH5-213ENST00000468136 NAPRTQ6XQN6 538 aa10.1□□□□□ -0.79
MSH5-213ENST00000468136 ZNF765Q7L2R6 523 aa10.1□□□□□ -0.79
MSH5-213ENST00000468136 CYP2U1Q7Z449 544 aa10.1□□□□□ -0.79
MSH5-213ENST00000468136 TMPRSS6Q8IU80 811 aa10.1□□□□□ -0.79
MSH5-213ENST00000468136 CLYBLQ8N0X4 340 aa10.1□□□□□ -0.79
MSH5-213ENST00000468136 MYO1HQ8N1T3 1032 aa10.1□□□□□ -0.79
MSH5-213ENST00000468136 FBXO39Q8N4B4 442 aa10.1□□□□□ -0.79
MSH5-213ENST00000468136 TRAM1L1Q8N609 369 aa10.1□□□□□ -0.79
MSH5-213ENST00000468136 CCNYL1Q8N7R7 359 aa10.1□□□□□ -0.79
MSH5-213ENST00000468136 C12orf76Q8N812 135 aaPredicted RBP10.1□□□□□ -0.79
MSH5-213ENST00000468136 ZNF781Q8N8C0 355 aa10.1□□□□□ -0.79
MSH5-213ENST00000468136 OR6K2Q8NGY2 324 aa10.1□□□□□ -0.79
MSH5-213ENST00000468136 CFAP61Q8NHU2 1237 aa10.1□□□□□ -0.79
MSH5-213ENST00000468136 CD200R1Q8TD46 325 aa10.1□□□□□ -0.79
MSH5-213ENST00000468136 ACTRT2Q8TDY3 377 aa10.1□□□□□ -0.79
MSH5-213ENST00000468136 GDPD5Q8WTR4 605 aa10.1□□□□□ -0.79
MSH5-213ENST00000468136 ANKRD49Q8WVL7 239 aa10.1□□□□□ -0.79
MSH5-213ENST00000468136 THOC1Q96FV9 657 aaKnown RBP10.1□□□□□ -0.79
MSH5-213ENST00000468136 KLHL32Q96NJ5 620 aa10.1□□□□□ -0.79
MSH5-213ENST00000468136 FAM83DQ9H4H8 585 aa10.1□□□□□ -0.79
MSH5-213ENST00000468136 COG4Q9H9E3 785 aa10.1□□□□□ -0.79
MSH5-213ENST00000468136 TCF7L2Q9NQB0 619 aa10.1□□□□□ -0.79
MSH5-213ENST00000468136 PNPOQ9NVS9 261 aa10.1□□□□□ -0.79
MSH5-213ENST00000468136 B4GALT6Q9UBX8 382 aa10.1□□□□□ -0.79
MSH5-213ENST00000468136 MARCOQ9UEW3 520 aaPredicted RBP10.1□□□□□ -0.79
MSH5-213ENST00000468136 MED16Q9Y2X0 877 aa10.1□□□□□ -0.79
MSH5-213ENST00000468136 CAPN14A8MX76 684 aa10.09□□□□□ -0.79
MSH5-213ENST00000468136 SPECC1L-ADORA2AF8WAN1 911 aa10.09□□□□□ -0.79
MSH5-213ENST00000468136 GAPDHSO14556 408 aaPredicted RBP10.09□□□□□ -0.79
MSH5-213ENST00000468136 GIPC1O14908 333 aa10.09□□□□□ -0.79
MSH5-213ENST00000468136 RAD51BO15315 384 aa10.09□□□□□ -0.79
MSH5-213ENST00000468136 ZBTB14O43829 449 aa10.09□□□□□ -0.79
MSH5-213ENST00000468136 SNX2O60749 519 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms