RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 CAPGP40121 348 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 TAS2R50P59544 299 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 HKDC1Q2TB90 917 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 PRR23BQ6ZRT6 265 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 NYAP1Q6ZVC0 841 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 P4HA3Q7Z4N8 544 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 HBS1LQ9Y450 684 aaKnown RBP8.67□□□□□ -1.02
HPS4-209ENST00000466781 ZNF879B4DU55 563 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 ARVCFO00192 962 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 DDX3XO00571 662 aaKnown RBP eCLIP8.67□□□□□ -1.029e-7■■■□□ 14.6
HPS4-209ENST00000466781 AZIN1O14977 448 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 PER2O15055 1255 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 FFAR2O15552 330 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 PAGE1O75459 146 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 BRCC3P46736 316 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 PPP2R2BQ00005 443 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 PPP3CAQ08209 521 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 PPIDQ08752 370 aaKnown RBP8.67□□□□□ -1.02
HPS4-209ENST00000466781 ILF3Q12906 894 aaKnown RBP eCLIP8.67□□□□□ -1.02
HPS4-209ENST00000466781 PARP15Q460N3 678 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 FAM153CQ494X1 144 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 SPDYCQ5MJ68 293 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 CDKAL1Q5VV42 579 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 TMPRSS11AQ6ZMR5 421 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 LRRC17Q8N6Y2 441 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 AMER2Q8N7J2 671 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 PHC3Q8NDX5 983 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 OR52K2Q8NGK3 314 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 FEM1CQ96JP0 617 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 C12orf42Q96LP6 360 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 GAL3ST4Q96RP7 486 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 TCF25Q9BQ70 676 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 MRPL45Q9BRJ2 306 aaKnown RBP8.67□□□□□ -1.02
HPS4-209ENST00000466781 ACE2Q9BYF1 805 aaPredicted RBP8.67□□□□□ -1.02
HPS4-209ENST00000466781 TRMT13Q9NUP7 481 aaKnown RBP8.67□□□□□ -1.02
HPS4-209ENST00000466781 ZNF490Q9ULM2 529 aaPredicted RBP8.67□□□□□ -1.02
HPS4-209ENST00000466781 HEBP2Q9Y5Z4 205 aa8.67□□□□□ -1.02
HPS4-209ENST00000466781 CHST10O43529 356 aa8.66□□□□□ -1.02
HPS4-209ENST00000466781 UBXN7O94888 489 aa8.66□□□□□ -1.02
HPS4-209ENST00000466781 TSHRP16473 764 aa8.66□□□□□ -1.02
HPS4-209ENST00000466781 ICAM3P32942 547 aa8.66□□□□□ -1.02
HPS4-209ENST00000466781 PSME3P61289 254 aa8.66□□□□□ -1.02
HPS4-209ENST00000466781 EML3Q32P44 896 aa8.66□□□□□ -1.02
HPS4-209ENST00000466781 C9orf57Q5W0N0 161 aa8.66□□□□□ -1.02
HPS4-209ENST00000466781 SRFBP1Q8NEF9 429 aaKnown RBP8.66□□□□□ -1.02
HPS4-209ENST00000466781 SLC9A6Q92581 669 aa8.66□□□□□ -1.02
HPS4-209ENST00000466781 HDAC10Q969S8 669 aa8.66□□□□□ -1.02
HPS4-209ENST00000466781 ZHX1-C8orf76Q96EF9 292 aa8.66□□□□□ -1.02
HPS4-209ENST00000466781 DDX18Q9NVP1 670 aaKnown RBP8.66□□□□□ -1.02
HPS4-209ENST00000466781 INTS10Q9NVR2 710 aaKnown RBP8.66□□□□□ -1.02
HPS4-209ENST00000466781 ARFGEF2Q9Y6D5 1785 aa8.66□□□□□ -1.02
HPS4-209ENST00000466781 RPP40O75818 363 aaKnown RBP8.66□□□□□ -1.02
HPS4-209ENST00000466781 S100A9P06702 114 aaKnown RBP8.66□□□□□ -1.02
HPS4-209ENST00000466781 DBTP11182 482 aaKnown RBP8.66□□□□□ -1.02
HPS4-209ENST00000466781 MEA1Q16626 185 aa8.66□□□□□ -1.02
HPS4-209ENST00000466781 BMT2Q1RMZ1 405 aa8.66□□□□□ -1.02
HPS4-209ENST00000466781 NET1Q7Z628 596 aaPredicted RBP8.66□□□□□ -1.02
HPS4-209ENST00000466781 FBXO15Q8NCQ5 510 aaPredicted RBP8.66□□□□□ -1.02
HPS4-209ENST00000466781 ZNF398Q8TD17 642 aa8.66□□□□□ -1.02
HPS4-209ENST00000466781 PYDC1Q8WXC3 89 aa8.66□□□□□ -1.02
HPS4-209ENST00000466781 ACP6Q9NPH0 428 aa8.66□□□□□ -1.02
HPS4-209ENST00000466781 GMIPQ9P107 970 aa8.66□□□□□ -1.02
HPS4-209ENST00000466781 PADI3Q9ULW8 664 aa8.66□□□□□ -1.02
HPS4-209ENST00000466781 ING4Q9UNL4 249 aa8.66□□□□□ -1.02
HPS4-209ENST00000466781 A0A1W2PRG6 482 aa8.66□□□□□ -1.02
HPS4-209ENST00000466781 MATKP42679 507 aa8.66□□□□□ -1.02
HPS4-209ENST00000466781 PLGLB1Q02325 96 aa8.66□□□□□ -1.02
HPS4-209ENST00000466781 SH3D19Q5HYK7 790 aa8.66□□□□□ -1.02
HPS4-209ENST00000466781 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.66□□□□□ -1.02
HPS4-209ENST00000466781 PMM1Q92871 262 aa8.66□□□□□ -1.02
HPS4-209ENST00000466781 FAM84AQ96KN4 292 aa8.66□□□□□ -1.02
HPS4-209ENST00000466781 BTN2A3PQ96KV6 586 aa8.66□□□□□ -1.02
HPS4-209ENST00000466781 DPEP2Q9H4A9 486 aa8.66□□□□□ -1.02
HPS4-209ENST00000466781 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.66□□□□□ -1.02
HPS4-209ENST00000466781 TRAFD1O14545 582 aaPredicted RBP8.66□□□□□ -1.02
HPS4-209ENST00000466781 PPP1R11O60927 126 aaPredicted RBP8.66□□□□□ -1.02
HPS4-209ENST00000466781 SLC35G6P0C7Q6 338 aa8.66□□□□□ -1.02
HPS4-209ENST00000466781 RPS6KA3P51812 740 aa8.66□□□□□ -1.02
HPS4-209ENST00000466781 SWI5Q1ZZU3 235 aa8.66□□□□□ -1.02
HPS4-209ENST00000466781 FNBP1LQ5T0N5 605 aa8.66□□□□□ -1.02
HPS4-209ENST00000466781 SULT1C3Q6IMI6 304 aa8.66□□□□□ -1.02
HPS4-209ENST00000466781 SLC35C1Q96A29 364 aa8.66□□□□□ -1.02
HPS4-209ENST00000466781 WRAP53Q9BUR4 548 aaKnown RBP8.66□□□□□ -1.02
HPS4-209ENST00000466781 RBPJLQ9UBG7 517 aa8.66□□□□□ -1.02
HPS4-209ENST00000466781 RAP2CQ9Y3L5 183 aa8.66□□□□□ -1.02
HPS4-209ENST00000466781 PCDHB11Q9Y5F2 797 aa8.66□□□□□ -1.02
HPS4-209ENST00000466781 SETD1AO15047 1707 aaKnown RBP8.66□□□□□ -1.02
HPS4-209ENST00000466781 TLX3O43711 291 aaPredicted RBP8.66□□□□□ -1.02
HPS4-209ENST00000466781 SNAP91O60641 907 aa8.66□□□□□ -1.02
HPS4-209ENST00000466781 RGS20O76081 388 aa8.66□□□□□ -1.02
HPS4-209ENST00000466781 PLGP00747 810 aaPredicted RBP8.66□□□□□ -1.02
HPS4-209ENST00000466781 ITGAVP06756 1048 aa8.66□□□□□ -1.02
HPS4-209ENST00000466781 ALDH3A2P51648 485 aa8.66□□□□□ -1.02
HPS4-209ENST00000466781 NAGLUP54802 743 aa8.66□□□□□ -1.02
HPS4-209ENST00000466781 DMPKQ09013 629 aa8.66□□□□□ -1.02
HPS4-209ENST00000466781 TUSC3Q13454 348 aa8.66□□□□□ -1.02
HPS4-209ENST00000466781 MED22Q15528 200 aa8.66□□□□□ -1.02
HPS4-209ENST00000466781 GCNT6Q5T4J0 391 aa8.66□□□□□ -1.02
HPS4-209ENST00000466781 SLC30A6Q6NXT4 461 aa8.66□□□□□ -1.02
HPS4-209ENST00000466781 SPATA19Q7Z5L4 167 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms