RNA–Protein interactions for RNA: ENST00000466392.1

EDEM3-204, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 5

Gene EDEM3, Length 491 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-204ENST00000466392 GALNT13Q8IUC8 556 aa11.69□□□□□ -0.54
EDEM3-204ENST00000466392 RAVER1Q8IY67 606 aaKnown RBP11.69□□□□□ -0.54
EDEM3-204ENST00000466392 NAGSQ8N159 534 aa11.69□□□□□ -0.54
EDEM3-204ENST00000466392 SDR16C5Q8N3Y7 309 aa11.69□□□□□ -0.54
EDEM3-204ENST00000466392 Q8N9G6 341 aaPredicted RBP11.69□□□□□ -0.54
EDEM3-204ENST00000466392 OR13C4Q8NGS5 318 aa11.69□□□□□ -0.54
EDEM3-204ENST00000466392 ZDHHC1Q8WTX9 485 aa11.69□□□□□ -0.54
EDEM3-204ENST00000466392 ZCCHC14Q8WYQ9 949 aaKnown RBP11.69□□□□□ -0.54
EDEM3-204ENST00000466392 GLMNQ92990 594 aa11.69□□□□□ -0.54
EDEM3-204ENST00000466392 GLYATL1Q969I3 302 aa11.69□□□□□ -0.54
EDEM3-204ENST00000466392 ZSCAN5AQ9BUG6 496 aa11.69□□□□□ -0.54
EDEM3-204ENST00000466392 GSDMCQ9BYG8 508 aa11.69□□□□□ -0.54
EDEM3-204ENST00000466392 CDH19Q9H159 772 aa11.69□□□□□ -0.54
EDEM3-204ENST00000466392 UGT1A7Q9HAW7 530 aa11.69□□□□□ -0.54
EDEM3-204ENST00000466392 UGT1A10Q9HAW8 530 aa11.69□□□□□ -0.54
EDEM3-204ENST00000466392 UGT1A8Q9HAW9 530 aa11.69□□□□□ -0.54
EDEM3-204ENST00000466392 TRNAU1APQ9NX07 287 aaKnown RBP11.69□□□□□ -0.54
EDEM3-204ENST00000466392 SMARCAL1Q9NZC9 954 aa11.69□□□□□ -0.54
EDEM3-204ENST00000466392 NFKBIL1Q9UBC1 381 aaPredicted RBP11.69□□□□□ -0.54
EDEM3-204ENST00000466392 FKBPLQ9UIM3 349 aa11.69□□□□□ -0.54
EDEM3-204ENST00000466392 RNF215Q9Y6U7 377 aa11.69□□□□□ -0.54
EDEM3-204ENST00000466392 BPTFQ12830 3046 aa11.69□□□□□ -0.54
EDEM3-204ENST00000466392 USP24Q9UPU5 2620 aa11.68□□□□□ -0.54
EDEM3-204ENST00000466392 GLYATL1P3A0A0U1RQE8 302 aa11.68□□□□□ -0.54
EDEM3-204ENST00000466392 CCDC78A2IDD5 438 aa11.68□□□□□ -0.54
EDEM3-204ENST00000466392 CSO75390 466 aaKnown RBP11.68□□□□□ -0.54
EDEM3-204ENST00000466392 KCNJ1P48048 391 aa11.68□□□□□ -0.54
EDEM3-204ENST00000466392 RPIAP49247 311 aa11.68□□□□□ -0.54
EDEM3-204ENST00000466392 CCL7P80098 99 aa11.68□□□□□ -0.54
EDEM3-204ENST00000466392 E2F1Q01094 437 aa11.68□□□□□ -0.54
EDEM3-204ENST00000466392 CYP4F3Q08477 520 aa11.68□□□□□ -0.54
EDEM3-204ENST00000466392 HLTFQ14527 1009 aaKnown RBP eCLIP11.68□□□□□ -0.54
EDEM3-204ENST00000466392 LONRF2Q1L5Z9 754 aa11.68□□□□□ -0.54
EDEM3-204ENST00000466392 C14orf28Q4W4Y0 310 aa11.68□□□□□ -0.54
EDEM3-204ENST00000466392 CDCP2Q5VXM1 449 aa11.68□□□□□ -0.54
EDEM3-204ENST00000466392 PHYKPLQ8IUZ5 450 aa11.68□□□□□ -0.54
EDEM3-204ENST00000466392 KLHDC8BQ8IXV7 354 aa11.68□□□□□ -0.54
EDEM3-204ENST00000466392 SLC35F6Q8N357 371 aa11.68□□□□□ -0.54
EDEM3-204ENST00000466392 DCBLD1Q8N8Z6 715 aa11.68□□□□□ -0.54
EDEM3-204ENST00000466392 OR4K2Q8NGD2 314 aa11.68□□□□□ -0.54
EDEM3-204ENST00000466392 GDAP1Q8TB36 358 aa11.68□□□□□ -0.54
EDEM3-204ENST00000466392 RTP4Q96DX8 246 aa11.68□□□□□ -0.54
EDEM3-204ENST00000466392 CCDC97Q96F63 343 aaPredicted RBP11.68□□□□□ -0.54
EDEM3-204ENST00000466392 MS4A14Q96JA4 679 aa11.68□□□□□ -0.54
EDEM3-204ENST00000466392 PDLIM2Q96JY6 352 aa11.68□□□□□ -0.54
EDEM3-204ENST00000466392 PLEKHG4BQ96PX9 1271 aa11.68□□□□□ -0.54
EDEM3-204ENST00000466392 TRABDQ9H4I3 376 aa11.68□□□□□ -0.54
EDEM3-204ENST00000466392 EVA1BQ9NVM1 165 aa11.68□□□□□ -0.54
EDEM3-204ENST00000466392 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.68□□□□□ -0.54
EDEM3-204ENST00000466392 NCKIPSDQ9NZQ3 722 aa11.68□□□□□ -0.54
EDEM3-204ENST00000466392 HACD3Q9P035 362 aa11.68□□□□□ -0.54
EDEM3-204ENST00000466392 VPS18Q9P253 973 aa11.68□□□□□ -0.54
EDEM3-204ENST00000466392 ZMIZ1Q9ULJ6 1067 aa11.68□□□□□ -0.54
EDEM3-204ENST00000466392 PKP3Q9Y446 797 aa11.68□□□□□ -0.54
EDEM3-204ENST00000466392 A0A1W2PQM1 296 aa11.67□□□□□ -0.54
EDEM3-204ENST00000466392 PMS2P1A4D2B8 440 aa11.67□□□□□ -0.54
EDEM3-204ENST00000466392 TAF4O00268 1085 aa11.67□□□□□ -0.54
EDEM3-204ENST00000466392 STX7O15400 261 aaKnown RBP11.67□□□□□ -0.54
EDEM3-204ENST00000466392 GRID2O43424 1007 aa11.67□□□□□ -0.54
EDEM3-204ENST00000466392 NUAK1O60285 661 aa11.67□□□□□ -0.54
EDEM3-204ENST00000466392 SNX2O60749 519 aa11.67□□□□□ -0.54
EDEM3-204ENST00000466392 CAPNS1P04632 268 aa11.67□□□□□ -0.54
EDEM3-204ENST00000466392 RPLP0P05388 317 aaKnown RBP11.67□□□□□ -0.54
EDEM3-204ENST00000466392 PRSS56P0CW18 603 aa11.67□□□□□ -0.54
EDEM3-204ENST00000466392 CDK4P11802 303 aa11.67□□□□□ -0.54
EDEM3-204ENST00000466392 GRIA1P42261 906 aa11.67□□□□□ -0.54
EDEM3-204ENST00000466392 PDX1P52945 283 aa11.67□□□□□ -0.54
EDEM3-204ENST00000466392 TERF1P54274 439 aa11.67□□□□□ -0.54
EDEM3-204ENST00000466392 SEPT6Q14141 434 aa11.67□□□□□ -0.54
EDEM3-204ENST00000466392 POU6F1Q14863 301 aa11.67□□□□□ -0.54
EDEM3-204ENST00000466392 TAF1AQ15573 450 aaPredicted RBP11.67□□□□□ -0.54
EDEM3-204ENST00000466392 P3H1Q32P28 736 aa11.67□□□□□ -0.54
EDEM3-204ENST00000466392 CERCAMQ5T4B2 595 aa11.67□□□□□ -0.54
EDEM3-204ENST00000466392 ZNF761Q86XN6 746 aaPredicted RBP11.67□□□□□ -0.54
EDEM3-204ENST00000466392 OR52K1Q8NGK4 314 aa11.67□□□□□ -0.54
EDEM3-204ENST00000466392 NAT6Q93015 286 aa11.67□□□□□ -0.54
EDEM3-204ENST00000466392 SRPK1Q96SB4 655 aaKnown RBP11.67□□□□□ -0.54
EDEM3-204ENST00000466392 FAM96AQ9H5X1 160 aa11.67□□□□□ -0.54
EDEM3-204ENST00000466392 ETNK1Q9HBU6 452 aa11.67□□□□□ -0.54
EDEM3-204ENST00000466392 TRIM39Q9HCM9 518 aa11.67□□□□□ -0.54
EDEM3-204ENST00000466392 RAD18Q9NS91 495 aa11.67□□□□□ -0.54
EDEM3-204ENST00000466392 LRIT1Q9P2V4 623 aa11.67□□□□□ -0.54
EDEM3-204ENST00000466392 TBC1D29Q9UFV1 150 aa11.67□□□□□ -0.54
EDEM3-204ENST00000466392 SLC23A2Q9UGH3 650 aa11.67□□□□□ -0.54
EDEM3-204ENST00000466392 ATXN7L1Q9ULK2 861 aaPredicted RBP11.67□□□□□ -0.54
EDEM3-204ENST00000466392 PYCARDQ9ULZ3 195 aa11.67□□□□□ -0.54
EDEM3-204ENST00000466392 DNAJC16Q9Y2G8 782 aa11.67□□□□□ -0.54
EDEM3-204ENST00000466392 A0A1W2PNU3 283 aaPredicted RBP11.66□□□□□ -0.54
EDEM3-204ENST00000466392 C2orf81A6NN90 581 aa11.66□□□□□ -0.54
EDEM3-204ENST00000466392 LDB2O43679 373 aa11.66□□□□□ -0.54
EDEM3-204ENST00000466392 PRAMEF1O95521 474 aa11.66□□□□□ -0.54
EDEM3-204ENST00000466392 AP2A1O95782 977 aa11.66□□□□□ -0.54
EDEM3-204ENST00000466392 MPOP05164 745 aa11.66□□□□□ -0.54
EDEM3-204ENST00000466392 GLB1P16278 677 aa11.66□□□□□ -0.54
EDEM3-204ENST00000466392 LPOP22079 712 aaPredicted RBP11.66□□□□□ -0.54
EDEM3-204ENST00000466392 RPL22P35268 128 aaKnown RBP11.66□□□□□ -0.54
EDEM3-204ENST00000466392 ZNF140P52738 457 aaPredicted RBP11.66□□□□□ -0.54
EDEM3-204ENST00000466392 CCDC38Q502W7 563 aa11.66□□□□□ -0.54
EDEM3-204ENST00000466392 DET1Q7L5Y6 550 aa11.66□□□□□ -0.54
EDEM3-204ENST00000466392 TMPRSS9Q7Z410 1059 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms