RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 ZNF542PQ5EBM4 170 aa16.79■□□□□ 0.28
USP39-211ENST00000465282 LVRNQ6Q4G3 990 aa16.79■□□□□ 0.28
USP39-211ENST00000465282 CEP112Q8N8E3 955 aa16.79■□□□□ 0.28
USP39-211ENST00000465282 TRIM51Q9BSJ1 452 aa16.79■□□□□ 0.28
USP39-211ENST00000465282 DUSP23Q9BVJ7 150 aa16.79■□□□□ 0.28
USP39-211ENST00000465282 CYP4F12Q9HCS2 524 aa16.79■□□□□ 0.28
USP39-211ENST00000465282 SAMD15Q9P1V8 674 aa16.79■□□□□ 0.28
USP39-211ENST00000465282 WHRNQ9P202 907 aa16.79■□□□□ 0.28
USP39-211ENST00000465282 SOX13Q9UN79 622 aa16.79■□□□□ 0.28
USP39-211ENST00000465282 ARID1BQ8NFD5 2236 aaPredicted RBP16.79■□□□□ 0.28
USP39-211ENST00000465282 PCNX2A6NKB5 2137 aa16.79■□□□□ 0.28
USP39-211ENST00000465282 CTAGE15A4D2H0 777 aa16.78■□□□□ 0.28
USP39-211ENST00000465282 LMO7DNF2Z398 122 aa16.78■□□□□ 0.28
USP39-211ENST00000465282 RAD51CO43502 376 aa16.78■□□□□ 0.28
USP39-211ENST00000465282 CTAGE8P0CG41 777 aa16.78■□□□□ 0.28
USP39-211ENST00000465282 ALPPL2P10696 532 aa16.78■□□□□ 0.28
USP39-211ENST00000465282 CSRP1P21291 193 aaKnown RBP16.78■□□□□ 0.28
USP39-211ENST00000465282 MGAT1P26572 445 aa16.78■□□□□ 0.28
USP39-211ENST00000465282 MC4RP32245 332 aa16.78■□□□□ 0.28
USP39-211ENST00000465282 TERF1P54274 439 aa16.78■□□□□ 0.28
USP39-211ENST00000465282 DRG2P55039 364 aaKnown RBP16.78■□□□□ 0.28
USP39-211ENST00000465282 TMPRSS15P98073 1019 aa16.78■□□□□ 0.28
USP39-211ENST00000465282 CACNG1Q06432 222 aa16.78■□□□□ 0.28
USP39-211ENST00000465282 LRP8Q14114 963 aa16.78■□□□□ 0.28
USP39-211ENST00000465282 RSPO4Q2I0M5 234 aaPredicted RBP16.78■□□□□ 0.28
USP39-211ENST00000465282 PRRT3Q5FWE3 981 aa16.78■□□□□ 0.28
USP39-211ENST00000465282 HIBCHQ6NVY1 386 aaPredicted RBP16.78■□□□□ 0.28
USP39-211ENST00000465282 RD3Q7Z3Z2 195 aa16.78■□□□□ 0.28
USP39-211ENST00000465282 PIP4P1Q86T03 277 aa16.78■□□□□ 0.28
USP39-211ENST00000465282 CTAGE6Q86UF2 777 aa16.78■□□□□ 0.28
USP39-211ENST00000465282 NAXDQ8IW45 347 aa16.78■□□□□ 0.28
USP39-211ENST00000465282 CTAGE4Q8IX94 777 aa16.78■□□□□ 0.28
USP39-211ENST00000465282 SLC25A45Q8N413 288 aa16.78■□□□□ 0.28
USP39-211ENST00000465282 MMGT1Q8N4V1 131 aa16.78■□□□□ 0.28
USP39-211ENST00000465282 ZNF548Q8NEK5 533 aaPredicted RBP16.78■□□□□ 0.28
USP39-211ENST00000465282 DDHD1Q8NEL9 900 aa16.78■□□□□ 0.28
USP39-211ENST00000465282 OR13J1Q8NGT2 312 aa16.78■□□□□ 0.28
USP39-211ENST00000465282 SCG3Q8WXD2 468 aaKnown RBP16.78■□□□□ 0.28
USP39-211ENST00000465282 PDXPQ96GD0 296 aa16.78■□□□□ 0.28
USP39-211ENST00000465282 NAT9Q9BTE0 207 aa16.78■□□□□ 0.28
USP39-211ENST00000465282 SLC32A1Q9H598 525 aa16.78■□□□□ 0.28
USP39-211ENST00000465282 CHRAC1Q9NRG0 131 aa16.78■□□□□ 0.28
USP39-211ENST00000465282 DLL3Q9NYJ7 618 aa16.78■□□□□ 0.28
USP39-211ENST00000465282 NLGN3Q9NZ94 848 aa16.78■□□□□ 0.28
USP39-211ENST00000465282 MOSPD1Q9UJG1 213 aa16.78■□□□□ 0.28
USP39-211ENST00000465282 ANAPC5Q9UJX4 755 aa16.78■□□□□ 0.28
USP39-211ENST00000465282 PNMA8BQ9ULN7 279 aaPredicted RBP16.78■□□□□ 0.28
USP39-211ENST00000465282 SUFUQ9UMX1 484 aa16.78■□□□□ 0.28
USP39-211ENST00000465282 TRBV5-4A0A0C4DH59 114 aa16.77■□□□□ 0.28
USP39-211ENST00000465282 FAM237BA0A1B0GVD1 139 aa16.77■□□□□ 0.28
USP39-211ENST00000465282 GOLGA8MH3BSY2 632 aa16.77■□□□□ 0.28
USP39-211ENST00000465282 NUAK1O60285 661 aa16.77■□□□□ 0.28
USP39-211ENST00000465282 UGT1A9O60656 530 aa16.77■□□□□ 0.28
USP39-211ENST00000465282 AVILO75366 819 aa16.77■□□□□ 0.28
USP39-211ENST00000465282 PAMP19021 973 aa16.77■□□□□ 0.28
USP39-211ENST00000465282 UGT1A6P19224 532 aa16.77■□□□□ 0.28
USP39-211ENST00000465282 UGT1A1P22309 533 aa16.77■□□□□ 0.28
USP39-211ENST00000465282 UGT1A4P22310 534 aa16.77■□□□□ 0.28
USP39-211ENST00000465282 UGT1A3P35503 534 aa16.77■□□□□ 0.28
USP39-211ENST00000465282 UGT1A5P35504 534 aa16.77■□□□□ 0.28
USP39-211ENST00000465282 PPARGP37231 505 aaPredicted RBP16.77■□□□□ 0.28
USP39-211ENST00000465282 PRAMEP78395 509 aa16.77■□□□□ 0.28
USP39-211ENST00000465282 IL9RQ01113 521 aa16.77■□□□□ 0.28
USP39-211ENST00000465282 TMEM115Q12893 351 aaPredicted RBP16.77■□□□□ 0.28
USP39-211ENST00000465282 CALCOCO2Q13137 446 aa16.77■□□□□ 0.28
USP39-211ENST00000465282 CBLBQ13191 982 aa16.77■□□□□ 0.28
USP39-211ENST00000465282 KCTD19Q17RG1 926 aaPredicted RBP16.77■□□□□ 0.28
USP39-211ENST00000465282 GLE1Q53GS7 698 aaKnown RBP16.77■□□□□ 0.28
USP39-211ENST00000465282 PYCR3Q53H96 274 aa16.77■□□□□ 0.28
USP39-211ENST00000465282 DNAJC21Q5F1R6 531 aaKnown RBP16.77■□□□□ 0.28
USP39-211ENST00000465282 LYPLAL1Q5VWZ2 237 aa16.77■□□□□ 0.28
USP39-211ENST00000465282 DUPD1Q68J44 220 aa16.77■□□□□ 0.28
USP39-211ENST00000465282 C8orf74Q6P047 294 aa16.77■□□□□ 0.28
USP39-211ENST00000465282 AFTPHQ6ULP2 937 aa16.77■□□□□ 0.28
USP39-211ENST00000465282 ADGRG6Q86SQ4 1221 aa16.77■□□□□ 0.28
USP39-211ENST00000465282 GKN2Q86XP6 184 aa16.77■□□□□ 0.28
USP39-211ENST00000465282 GALNT13Q8IUC8 556 aa16.77■□□□□ 0.28
USP39-211ENST00000465282 PDIK1LQ8N165 341 aa16.77■□□□□ 0.28
USP39-211ENST00000465282 GDAP1Q8TB36 358 aa16.77■□□□□ 0.28
USP39-211ENST00000465282 LMX1AQ8TE12 382 aa16.77■□□□□ 0.28
USP39-211ENST00000465282 SETD7Q8WTS6 366 aaKnown RBP16.77■□□□□ 0.28
USP39-211ENST00000465282 HDAC10Q969S8 669 aa16.77■□□□□ 0.28
USP39-211ENST00000465282 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.77■□□□□ 0.28
USP39-211ENST00000465282 ZNF514Q96K75 400 aaPredicted RBP16.77■□□□□ 0.28
USP39-211ENST00000465282 TTC25Q96NG3 672 aa16.77■□□□□ 0.28
USP39-211ENST00000465282 TTC1Q99614 292 aa16.77■□□□□ 0.28
USP39-211ENST00000465282 CDC6Q99741 560 aa16.77■□□□□ 0.28
USP39-211ENST00000465282 LRRC61Q9BV99 259 aa16.77■□□□□ 0.28
USP39-211ENST00000465282 CARS2Q9HA77 564 aaKnown RBP16.77■□□□□ 0.28
USP39-211ENST00000465282 UGT1A7Q9HAW7 530 aa16.77■□□□□ 0.28
USP39-211ENST00000465282 UGT1A10Q9HAW8 530 aa16.77■□□□□ 0.28
USP39-211ENST00000465282 UGT1A8Q9HAW9 530 aa16.77■□□□□ 0.28
USP39-211ENST00000465282 MRPL40Q9NQ50 206 aaKnown RBP16.77■□□□□ 0.28
USP39-211ENST00000465282 TREX1Q9NSU2 369 aa16.77■□□□□ 0.28
USP39-211ENST00000465282 SYBUQ9NX95 663 aa16.77■□□□□ 0.28
USP39-211ENST00000465282 ATXN10Q9UBB4 475 aa16.77■□□□□ 0.28
USP39-211ENST00000465282 TMPRSS11EQ9UL52 423 aa16.77■□□□□ 0.28
USP39-211ENST00000465282 TMEM98Q9Y2Y6 226 aa16.77■□□□□ 0.28
USP39-211ENST00000465282 OAS3Q9Y6K5 1087 aaKnown RBP16.77■□□□□ 0.28
USP39-211ENST00000465282 CHUKO15111 745 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms