RNA–Protein interactions for RNA: ENST00000463688.6

COMMD3-205, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,407 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-205ENST00000463688 EPB41L5Q9HCM4 733 aa13.31□□□□□ -0.28
COMMD3-205ENST00000463688 SARS2Q9NP81 518 aaKnown RBP13.31□□□□□ -0.28
COMMD3-205ENST00000463688 KCNK4Q9NYG8 393 aa13.31□□□□□ -0.28
COMMD3-205ENST00000463688 SATB2Q9UPW6 733 aa13.31□□□□□ -0.28
COMMD3-205ENST00000463688 SHOC2Q9UQ13 582 aa13.31□□□□□ -0.28
COMMD3-205ENST00000463688 TMEM98Q9Y2Y6 226 aa13.31□□□□□ -0.28
COMMD3-205ENST00000463688 RNF215Q9Y6U7 377 aa13.31□□□□□ -0.28
COMMD3-205ENST00000463688 NVLO15381 856 aaKnown RBP13.3□□□□□ -0.28
COMMD3-205ENST00000463688 STX7O15400 261 aaKnown RBP13.3□□□□□ -0.28
COMMD3-205ENST00000463688 ARHGAP6O43182 974 aa13.3□□□□□ -0.28
COMMD3-205ENST00000463688 CDK14O94921 469 aa13.3□□□□□ -0.28
COMMD3-205ENST00000463688 TNFSF15O95150 251 aa13.3□□□□□ -0.28
COMMD3-205ENST00000463688 ECEL1O95672 775 aa13.3□□□□□ -0.28
COMMD3-205ENST00000463688 MT-CYBP00156 380 aaPredicted RBP13.3□□□□□ -0.28
COMMD3-205ENST00000463688 MYF5P13349 255 aa13.3□□□□□ -0.28
COMMD3-205ENST00000463688 PECAM1P16284 738 aaPredicted RBP13.3□□□□□ -0.28
COMMD3-205ENST00000463688 NFKB1P19838 968 aa13.3□□□□□ -0.28
COMMD3-205ENST00000463688 SPAM1P38567 509 aa13.3□□□□□ -0.28
COMMD3-205ENST00000463688 HALP42357 657 aa13.3□□□□□ -0.28
COMMD3-205ENST00000463688 PPM1FP49593 454 aaPredicted RBP13.3□□□□□ -0.28
COMMD3-205ENST00000463688 LONRF2Q1L5Z9 754 aa13.3□□□□□ -0.28
COMMD3-205ENST00000463688 ZNF449Q6P9G9 518 aa13.3□□□□□ -0.28
COMMD3-205ENST00000463688 KDELC2Q7Z4H8 507 aa13.3□□□□□ -0.28
COMMD3-205ENST00000463688 CLEC14AQ86T13 490 aa13.3□□□□□ -0.28
COMMD3-205ENST00000463688 TRIM48Q8IWZ4 208 aa13.3□□□□□ -0.28
COMMD3-205ENST00000463688 SFRP1Q8N474 314 aa13.3□□□□□ -0.28
COMMD3-205ENST00000463688 Q8N9G6 341 aaPredicted RBP13.3□□□□□ -0.28
COMMD3-205ENST00000463688 LRRC57Q8N9N7 239 aa13.3□□□□□ -0.28
COMMD3-205ENST00000463688 IPMKQ8NFU5 416 aa13.3□□□□□ -0.28
COMMD3-205ENST00000463688 OR4D9Q8NGE8 314 aa13.3□□□□□ -0.28
COMMD3-205ENST00000463688 SPATA22Q8NHS9 363 aa13.3□□□□□ -0.28
COMMD3-205ENST00000463688 GDAP1Q8TB36 358 aa13.3□□□□□ -0.28
COMMD3-205ENST00000463688 ACTL9Q8TC94 416 aa13.3□□□□□ -0.28
COMMD3-205ENST00000463688 HNRNPLLQ8WVV9 542 aaKnown RBP13.3□□□□□ -0.28
COMMD3-205ENST00000463688 MAIP1Q8WWC4 291 aa13.3□□□□□ -0.28
COMMD3-205ENST00000463688 SPATA13Q96N96 652 aa13.3□□□□□ -0.28
COMMD3-205ENST00000463688 SUDS3Q9H7L9 328 aaPredicted RBP13.3□□□□□ -0.28
COMMD3-205ENST00000463688 UCK1Q9HA47 277 aa13.3□□□□□ -0.28
COMMD3-205ENST00000463688 SPATS2LQ9NUQ6 558 aaKnown RBP13.3□□□□□ -0.28
COMMD3-205ENST00000463688 SAE1Q9UBE0 346 aaPredicted RBP13.3□□□□□ -0.28
COMMD3-205ENST00000463688 PCDHB1Q9Y5F3 818 aa13.3□□□□□ -0.28
COMMD3-205ENST00000463688 DOCK9Q9BZ29 2069 aa13.3□□□□□ -0.28
COMMD3-205ENST00000463688 TEX51A0A1B0GUA7 166 aa13.3□□□□□ -0.28
COMMD3-205ENST00000463688 ERI2A8K979 691 aaKnown RBP13.3□□□□□ -0.28
COMMD3-205ENST00000463688 CFAP99D6REC4 459 aa13.3□□□□□ -0.28
COMMD3-205ENST00000463688 KCNN4O15554 427 aa13.3□□□□□ -0.28
COMMD3-205ENST00000463688 F3P13726 295 aa13.3□□□□□ -0.28
COMMD3-205ENST00000463688 LPOP22079 712 aaPredicted RBP13.3□□□□□ -0.28
COMMD3-205ENST00000463688 IDSP22304 550 aa13.3□□□□□ -0.28
COMMD3-205ENST00000463688 CSTF2P33240 577 aaKnown RBP eCLIP13.3□□□□□ -0.28
COMMD3-205ENST00000463688 POLD2P49005 469 aa13.3□□□□□ -0.28
COMMD3-205ENST00000463688 OTUD4Q01804 1114 aaKnown RBP13.3□□□□□ -0.28
COMMD3-205ENST00000463688 ZFP36L1Q07352 338 aaKnown RBP13.3□□□□□ -0.28
COMMD3-205ENST00000463688 PARP6Q2NL67 630 aa13.3□□□□□ -0.28
COMMD3-205ENST00000463688 SEL1L2Q5TEA6 688 aa13.3□□□□□ -0.28
COMMD3-205ENST00000463688 KLHL35Q6PF15 583 aa13.3□□□□□ -0.28
COMMD3-205ENST00000463688 C4orf22Q6V702 233 aa13.3□□□□□ -0.28
COMMD3-205ENST00000463688 WASH2PQ6VEQ5 465 aa13.3□□□□□ -0.28
COMMD3-205ENST00000463688 RAD9BQ6WBX8 426 aa13.3□□□□□ -0.28
COMMD3-205ENST00000463688 ARHGEF18Q6ZSZ5 1173 aa13.3□□□□□ -0.28
COMMD3-205ENST00000463688 MARK2Q7KZI7 788 aaKnown RBP13.3□□□□□ -0.28
COMMD3-205ENST00000463688 CHST15Q7LFX5 561 aaPredicted RBP13.3□□□□□ -0.28
COMMD3-205ENST00000463688 LINC00523Q86TU6 105 aa13.3□□□□□ -0.28
COMMD3-205ENST00000463688 NRROSQ86YC3 692 aa13.3□□□□□ -0.28
COMMD3-205ENST00000463688 AGBL5Q8NDL9 886 aa13.3□□□□□ -0.28
COMMD3-205ENST00000463688 BLOC1S5Q8TDH9 187 aa13.3□□□□□ -0.28
COMMD3-205ENST00000463688 KRT35Q92764 455 aa13.3□□□□□ -0.28
COMMD3-205ENST00000463688 ULK4Q96C45 1275 aa13.3□□□□□ -0.28
COMMD3-205ENST00000463688 TTC1Q99614 292 aa13.3□□□□□ -0.28
COMMD3-205ENST00000463688 CEP41Q9BYV8 373 aa13.3□□□□□ -0.28
COMMD3-205ENST00000463688 ASPSCR1Q9BZE9 553 aa13.3□□□□□ -0.28
COMMD3-205ENST00000463688 VPS37BQ9H9H4 285 aa13.3□□□□□ -0.28
COMMD3-205ENST00000463688 WASH6PQ9NQA3 447 aa13.3□□□□□ -0.28
COMMD3-205ENST00000463688 ACSL6Q9UKU0 697 aa13.3□□□□□ -0.28
COMMD3-205ENST00000463688 DMXL2Q8TDJ6 3036 aa13.29□□□□□ -0.28
COMMD3-205ENST00000463688 CHD6Q8TD26 2715 aa13.29□□□□□ -0.28
COMMD3-205ENST00000463688 FREM2Q5SZK8 3169 aa13.29□□□□□ -0.28
COMMD3-205ENST00000463688 AKAP13Q12802 2813 aa13.29□□□□□ -0.28
COMMD3-205ENST00000463688 TDRD6O60522 2096 aaKnown RBP13.29□□□□□ -0.28
COMMD3-205ENST00000463688 GLYATL1P3A0A0U1RQE8 302 aa13.29□□□□□ -0.28
COMMD3-205ENST00000463688 TK2O00142 265 aa13.29□□□□□ -0.28
COMMD3-205ENST00000463688 AP3B1O00203 1094 aa13.29□□□□□ -0.28
COMMD3-205ENST00000463688 DNAJC6O75061 913 aa13.29□□□□□ -0.28
COMMD3-205ENST00000463688 BPIP17213 487 aa13.29□□□□□ -0.28
COMMD3-205ENST00000463688 RBL1P28749 1068 aa13.29□□□□□ -0.28
COMMD3-205ENST00000463688 RAB15P59190 212 aa13.29□□□□□ -0.28
COMMD3-205ENST00000463688 HHEXQ03014 270 aa13.29□□□□□ -0.28
COMMD3-205ENST00000463688 TCEA2Q15560 299 aa13.29□□□□□ -0.28
COMMD3-205ENST00000463688 TAF1AQ15573 450 aaPredicted RBP13.29□□□□□ -0.28
COMMD3-205ENST00000463688 INSCQ1MX18 579 aa13.29□□□□□ -0.28
COMMD3-205ENST00000463688 SIRPB2Q5JXA9 342 aa13.29□□□□□ -0.28
COMMD3-205ENST00000463688 ANKRD20A2Q5SQ80 823 aa13.29□□□□□ -0.28
COMMD3-205ENST00000463688 PHF19Q5T6S3 580 aa13.29□□□□□ -0.28
COMMD3-205ENST00000463688 ANKRD20A1Q5TYW2 823 aa13.29□□□□□ -0.28
COMMD3-205ENST00000463688 ANKRD20A3Q5VUR7 823 aa13.29□□□□□ -0.28
COMMD3-205ENST00000463688 IYDQ6PHW0 289 aa13.29□□□□□ -0.28
COMMD3-205ENST00000463688 WDR74Q6RFH5 385 aaPredicted RBP13.29□□□□□ -0.28
COMMD3-205ENST00000463688 KDELC1Q6UW63 502 aa13.29□□□□□ -0.28
COMMD3-205ENST00000463688 XKR5Q6UX68 686 aa13.29□□□□□ -0.28
COMMD3-205ENST00000463688 GPR155Q7Z3F1 870 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms