RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 GABPB2Q8TAK5 448 aaPredicted RBP14.23□□□□□ -0.13
COL6A1-202ENST00000463060 EPS8L3Q8TE67 593 aaKnown RBP14.23□□□□□ -0.13
COL6A1-202ENST00000463060 LPGAT1Q92604 370 aa14.23□□□□□ -0.13
COL6A1-202ENST00000463060 GLYATL1Q969I3 302 aa14.23□□□□□ -0.13
COL6A1-202ENST00000463060 FUBP1Q96AE4 644 aaKnown RBP14.23□□□□□ -0.13
COL6A1-202ENST00000463060 ULK4Q96C45 1275 aa14.23□□□□□ -0.13
COL6A1-202ENST00000463060 CCDC97Q96F63 343 aaPredicted RBP14.23□□□□□ -0.13
COL6A1-202ENST00000463060 COX14Q96I36 57 aa14.23□□□□□ -0.13
COL6A1-202ENST00000463060 TEX101Q9BY14 249 aa14.23□□□□□ -0.13
COL6A1-202ENST00000463060 P2RY12Q9H244 342 aa14.23□□□□□ -0.13
COL6A1-202ENST00000463060 INTS10Q9NVR2 710 aaKnown RBP14.23□□□□□ -0.13
COL6A1-202ENST00000463060 LGALS13Q9UHV8 139 aa14.23□□□□□ -0.13
COL6A1-202ENST00000463060 INVSQ9Y283 1065 aa14.23□□□□□ -0.13
COL6A1-202ENST00000463060 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.23□□□□□ -0.13
COL6A1-202ENST00000463060 RASGRF2O14827 1237 aa14.22□□□□□ -0.13
COL6A1-202ENST00000463060 SLC31A1O15431 190 aa14.22□□□□□ -0.13
COL6A1-202ENST00000463060 HOXC4P09017 264 aaPredicted RBP14.22□□□□□ -0.13
COL6A1-202ENST00000463060 BCKDHBP21953 392 aa14.22□□□□□ -0.13
COL6A1-202ENST00000463060 IGFALSP35858 605 aa14.22□□□□□ -0.13
COL6A1-202ENST00000463060 NUDT1P36639 197 aa14.22□□□□□ -0.13
COL6A1-202ENST00000463060 CSTF1Q05048 431 aaKnown RBP14.22□□□□□ -0.13
COL6A1-202ENST00000463060 ITIH4Q14624 930 aa14.22□□□□□ -0.13
COL6A1-202ENST00000463060 ZNF528Q3MIS6 628 aa14.22□□□□□ -0.13
COL6A1-202ENST00000463060 KHDC1Q4VXA5 237 aaKnown RBP14.22□□□□□ -0.13
COL6A1-202ENST00000463060 SETMARQ53H47 684 aaPredicted RBP14.22□□□□□ -0.13
COL6A1-202ENST00000463060 AARS2Q5JTZ9 985 aaKnown RBP14.22□□□□□ -0.13
COL6A1-202ENST00000463060 SLC36A4Q6YBV0 504 aa14.22□□□□□ -0.13
COL6A1-202ENST00000463060 TAS2R42Q7RTR8 314 aa14.22□□□□□ -0.13
COL6A1-202ENST00000463060 LONP2Q86WA8 852 aa14.22□□□□□ -0.13
COL6A1-202ENST00000463060 CYP4X1Q8N118 509 aa14.22□□□□□ -0.13
COL6A1-202ENST00000463060 TMEM145Q8NBT3 493 aa14.22□□□□□ -0.13
COL6A1-202ENST00000463060 MZB1Q8WU39 189 aa14.22□□□□□ -0.13
COL6A1-202ENST00000463060 BMFQ96LC9 184 aa14.22□□□□□ -0.13
COL6A1-202ENST00000463060 BIRC8Q96P09 236 aa14.22□□□□□ -0.13
COL6A1-202ENST00000463060 RBBP8Q99708 897 aa14.22□□□□□ -0.13
COL6A1-202ENST00000463060 C1QTNF7Q9BXJ2 289 aa14.22□□□□□ -0.13
COL6A1-202ENST00000463060 FAM126AQ9BYI3 521 aaPredicted RBP14.22□□□□□ -0.13
COL6A1-202ENST00000463060 RHOJQ9H4E5 214 aa14.22□□□□□ -0.13
COL6A1-202ENST00000463060 FBXO6Q9NRD1 293 aaPredicted RBP14.22□□□□□ -0.13
COL6A1-202ENST00000463060 ZDHHC3Q9NYG2 299 aa14.22□□□□□ -0.13
COL6A1-202ENST00000463060 DMTF1Q9Y222 760 aa14.22□□□□□ -0.13
COL6A1-202ENST00000463060 HS3ST3A1Q9Y663 406 aa14.22□□□□□ -0.13
COL6A1-202ENST00000463060 A0A1W2PPC4 97 aa14.21□□□□□ -0.13
COL6A1-202ENST00000463060 SGTAO43765 313 aa14.21□□□□□ -0.13
COL6A1-202ENST00000463060 OR1I1O60431 355 aa14.21□□□□□ -0.13
COL6A1-202ENST00000463060 CDH16O75309 829 aa14.21□□□□□ -0.13
COL6A1-202ENST00000463060 NDUFS3O75489 264 aa14.21□□□□□ -0.13
COL6A1-202ENST00000463060 PYGLP06737 847 aa14.21□□□□□ -0.13
COL6A1-202ENST00000463060 IVLP07476 585 aa14.21□□□□□ -0.13
COL6A1-202ENST00000463060 HNRNPA2B1P22626 353 aaKnown RBP14.21□□□□□ -0.13
COL6A1-202ENST00000463060 RPS3P23396 243 aaKnown RBP eCLIP14.21□□□□□ -0.13
COL6A1-202ENST00000463060 SPRP35270 261 aaPredicted RBP14.21□□□□□ -0.13
COL6A1-202ENST00000463060 PTGER3P43115 390 aa14.21□□□□□ -0.13
COL6A1-202ENST00000463060 GPR1P46091 355 aa14.21□□□□□ -0.13
COL6A1-202ENST00000463060 CD151P48509 253 aa14.21□□□□□ -0.13
COL6A1-202ENST00000463060 SERPINB9P50453 376 aa14.21□□□□□ -0.13
COL6A1-202ENST00000463060 CSRP3P50461 194 aa14.21□□□□□ -0.13
COL6A1-202ENST00000463060 LIMK2P53671 638 aa14.21□□□□□ -0.13
COL6A1-202ENST00000463060 TIAL1Q01085 375 aaKnown RBP eCLIP14.21□□□□□ -0.13
COL6A1-202ENST00000463060 IFFO1Q0D2I5 559 aa14.21□□□□□ -0.13
COL6A1-202ENST00000463060 ILF2Q12905 390 aaKnown RBP14.21□□□□□ -0.13
COL6A1-202ENST00000463060 INPP5AQ14642 412 aa14.21□□□□□ -0.13
COL6A1-202ENST00000463060 LDLRAP1Q5SW96 308 aa14.21□□□□□ -0.13
COL6A1-202ENST00000463060 RNF187Q5TA31 235 aaPredicted RBP14.21□□□□□ -0.13
COL6A1-202ENST00000463060 RAET1GQ6H3X3 334 aa14.21□□□□□ -0.13
COL6A1-202ENST00000463060 KDM7AQ6ZMT4 941 aa14.21□□□□□ -0.13
COL6A1-202ENST00000463060 SLC41A1Q8IVJ1 513 aa14.21□□□□□ -0.13
COL6A1-202ENST00000463060 RIBC1Q8N443 379 aaPredicted RBP14.21□□□□□ -0.13
COL6A1-202ENST00000463060 ACVR1CQ8NER5 493 aa14.21□□□□□ -0.13
COL6A1-202ENST00000463060 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.21□□□□□ -0.13
COL6A1-202ENST00000463060 MRRFQ96E11 262 aaKnown RBP14.21□□□□□ -0.13
COL6A1-202ENST00000463060 COPS8Q99627 209 aa14.21□□□□□ -0.13
COL6A1-202ENST00000463060 GPR22Q99680 433 aa14.21□□□□□ -0.13
COL6A1-202ENST00000463060 SH3GL2Q99962 352 aa14.21□□□□□ -0.13
COL6A1-202ENST00000463060 BOCQ9BWV1 1114 aa14.21□□□□□ -0.13
COL6A1-202ENST00000463060 DUSP15Q9H1R2 295 aaPredicted RBP14.21□□□□□ -0.13
COL6A1-202ENST00000463060 PSMC3IPQ9P2W1 217 aaPredicted RBP14.21□□□□□ -0.13
COL6A1-202ENST00000463060 CTNNAL1Q9UBT7 734 aa14.21□□□□□ -0.13
COL6A1-202ENST00000463060 CRLS1Q9UJA2 301 aa14.21□□□□□ -0.13
COL6A1-202ENST00000463060 MED16Q9Y2X0 877 aa14.21□□□□□ -0.13
COL6A1-202ENST00000463060 MTO1Q9Y2Z2 717 aaKnown RBP14.21□□□□□ -0.13
COL6A1-202ENST00000463060 OAS3Q9Y6K5 1087 aaKnown RBP14.21□□□□□ -0.13
COL6A1-202ENST00000463060 ABCA7Q8IZY2 2146 aa14.21□□□□□ -0.13
COL6A1-202ENST00000463060 POM121BA6NF01 834 aa14.2□□□□□ -0.14
COL6A1-202ENST00000463060 PRAMEF26H0Y7S4 382 aa14.2□□□□□ -0.14
COL6A1-202ENST00000463060 NDUFS2O75306 463 aa14.2□□□□□ -0.14
COL6A1-202ENST00000463060 FSBPO95073 299 aa14.2□□□□□ -0.14
COL6A1-202ENST00000463060 PCCBP05166 539 aa14.2□□□□□ -0.14
COL6A1-202ENST00000463060 INHBAP08476 426 aa14.2□□□□□ -0.14
COL6A1-202ENST00000463060 PMLP29590 882 aa14.2□□□□□ -0.14
COL6A1-202ENST00000463060 PPARGP37231 505 aaPredicted RBP14.2□□□□□ -0.14
COL6A1-202ENST00000463060 ABCG1P45844 678 aa14.2□□□□□ -0.14
COL6A1-202ENST00000463060 SLCO1A2P46721 670 aa14.2□□□□□ -0.14
COL6A1-202ENST00000463060 PFN3P60673 137 aa14.2□□□□□ -0.14
COL6A1-202ENST00000463060 CEP85LQ5SZL2 805 aa14.2□□□□□ -0.14
COL6A1-202ENST00000463060 GCNT7Q6ZNI0 430 aa14.2□□□□□ -0.14
COL6A1-202ENST00000463060 TIFABQ6ZNK6 161 aa14.2□□□□□ -0.14
COL6A1-202ENST00000463060 SH2D5Q6ZV89 423 aa14.2□□□□□ -0.14
COL6A1-202ENST00000463060 ABI3BPQ7Z7G0 1075 aa14.2□□□□□ -0.14
COL6A1-202ENST00000463060 ADGRG6Q86SQ4 1221 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms