RNA–Protein interactions for RNA: ENST00000461612.1

PRPF4B-202, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 629 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-202ENST00000461612 ABCD3P28288 659 aa4.55□□□□□ -1.68
PRPF4B-202ENST00000461612 DCTDP32321 178 aa4.55□□□□□ -1.68
PRPF4B-202ENST00000461612 ELF1P32519 619 aa4.55□□□□□ -1.68
PRPF4B-202ENST00000461612 MAN1A1P33908 653 aa4.55□□□□□ -1.68
PRPF4B-202ENST00000461612 DDIT3P35638 169 aa4.55□□□□□ -1.68
PRPF4B-202ENST00000461612 GABRB2P47870 512 aa4.55□□□□□ -1.68
PRPF4B-202ENST00000461612 NR1H2P55055 460 aa4.55□□□□□ -1.68
PRPF4B-202ENST00000461612 TDGQ13569 410 aa4.55□□□□□ -1.68
PRPF4B-202ENST00000461612 SHHQ15465 462 aa4.55□□□□□ -1.68
PRPF4B-202ENST00000461612 MAPRE1Q15691 268 aaKnown RBP4.55□□□□□ -1.68
PRPF4B-202ENST00000461612 ZNF667Q5HYK9 610 aa4.55□□□□□ -1.68
PRPF4B-202ENST00000461612 FNBP1LQ5T0N5 605 aa4.55□□□□□ -1.68
PRPF4B-202ENST00000461612 FAM69AQ5T7M9 428 aa4.55□□□□□ -1.68
PRPF4B-202ENST00000461612 TRILQ7L0X0 811 aa4.55□□□□□ -1.68
PRPF4B-202ENST00000461612 TBC1D26Q86UD7 250 aa4.55□□□□□ -1.68
PRPF4B-202ENST00000461612 AACSQ86V21 672 aa4.55□□□□□ -1.68
PRPF4B-202ENST00000461612 HEATR4Q86WZ0 1026 aa4.55□□□□□ -1.68
PRPF4B-202ENST00000461612 ITPRIPQ8IWB1 547 aa4.55□□□□□ -1.68
PRPF4B-202ENST00000461612 PELI3Q8N2H9 469 aa4.55□□□□□ -1.68
PRPF4B-202ENST00000461612 PLD5Q8N7P1 536 aa4.55□□□□□ -1.68
PRPF4B-202ENST00000461612 ACER1Q8TDN7 264 aa4.55□□□□□ -1.68
PRPF4B-202ENST00000461612 BADQ92934 168 aa4.55□□□□□ -1.68
PRPF4B-202ENST00000461612 SNAPC3Q92966 411 aa4.55□□□□□ -1.68
PRPF4B-202ENST00000461612 GLT1D1Q96MS3 346 aa4.55□□□□□ -1.68
PRPF4B-202ENST00000461612 YME1L1Q96TA2 773 aa4.55□□□□□ -1.68
PRPF4B-202ENST00000461612 DCLK3Q9C098 648 aa4.55□□□□□ -1.68
PRPF4B-202ENST00000461612 NPFFR1Q9GZQ6 430 aa4.55□□□□□ -1.68
PRPF4B-202ENST00000461612 VCPKMTQ9H867 229 aa4.55□□□□□ -1.68
PRPF4B-202ENST00000461612 PIH1D3Q9NQM4 214 aaKnown RBP4.55□□□□□ -1.68
PRPF4B-202ENST00000461612 NDRG3Q9UGV2 375 aa4.55□□□□□ -1.68
PRPF4B-202ENST00000461612 FBXO9Q9UK97 447 aaPredicted RBP4.55□□□□□ -1.68
PRPF4B-202ENST00000461612 FZD10Q9ULW2 581 aa4.55□□□□□ -1.68
PRPF4B-202ENST00000461612 CARD8Q9Y2G2 431 aa4.55□□□□□ -1.68
PRPF4B-202ENST00000461612 HTTP42858 3142 aa4.55□□□□□ -1.68
PRPF4B-202ENST00000461612 MYH3P11055 1940 aa4.54□□□□□ -1.68
PRPF4B-202ENST00000461612 ELP1O95163 1332 aa4.54□□□□□ -1.68
PRPF4B-202ENST00000461612 ZNF646O15015 1829 aaPredicted RBP4.54□□□□□ -1.68
PRPF4B-202ENST00000461612 TEX13CA0A0J9YWL9 993 aa4.54□□□□□ -1.68
PRPF4B-202ENST00000461612 LDB2O43679 373 aa4.54□□□□□ -1.68
PRPF4B-202ENST00000461612 LIASO43766 372 aa4.54□□□□□ -1.68
PRPF4B-202ENST00000461612 CABYRO75952 493 aa4.54□□□□□ -1.68
PRPF4B-202ENST00000461612 NTN1O95631 604 aa4.54□□□□□ -1.68
PRPF4B-202ENST00000461612 HEXAP06865 529 aa4.54□□□□□ -1.68
PRPF4B-202ENST00000461612 FOSL2P15408 326 aa4.54□□□□□ -1.68
PRPF4B-202ENST00000461612 NAGAP17050 411 aa4.54□□□□□ -1.68
PRPF4B-202ENST00000461612 SRD5A1P18405 259 aa4.54□□□□□ -1.68
PRPF4B-202ENST00000461612 POU1F1P28069 291 aa4.54□□□□□ -1.68
PRPF4B-202ENST00000461612 ARRB2P32121 409 aa4.54□□□□□ -1.68
PRPF4B-202ENST00000461612 SHMT1P34896 483 aa4.54□□□□□ -1.68
PRPF4B-202ENST00000461612 GGT5P36269 586 aa4.54□□□□□ -1.68
PRPF4B-202ENST00000461612 MLH1P40692 756 aa4.54□□□□□ -1.68
PRPF4B-202ENST00000461612 FOXG1P55316 489 aaPredicted RBP4.54□□□□□ -1.68
PRPF4B-202ENST00000461612 LINC00205P59089 165 aa4.54□□□□□ -1.68
PRPF4B-202ENST00000461612 GABPAQ06546 454 aa4.54□□□□□ -1.68
PRPF4B-202ENST00000461612 TRAF2Q12933 501 aa4.54□□□□□ -1.68
PRPF4B-202ENST00000461612 TRAF1Q13077 416 aa4.54□□□□□ -1.68
PRPF4B-202ENST00000461612 GPS2Q13227 327 aa4.54□□□□□ -1.68
PRPF4B-202ENST00000461612 PPIGQ13427 754 aaKnown RBP eCLIP4.54□□□□□ -1.681e-6■■■■□ 22.7
PRPF4B-202ENST00000461612 HIST2H2ACQ16777 129 aaPredicted RBP4.54□□□□□ -1.68
PRPF4B-202ENST00000461612 ZNF284Q2VY69 593 aa4.54□□□□□ -1.68
PRPF4B-202ENST00000461612 ZNF549Q6P9A3 640 aa4.54□□□□□ -1.68
PRPF4B-202ENST00000461612 CPLX2Q6PUV4 134 aaKnown RBP4.54□□□□□ -1.68
PRPF4B-202ENST00000461612 CCDC129Q6ZRS4 1044 aa4.54□□□□□ -1.68
PRPF4B-202ENST00000461612 Q6ZSV7 163 aa4.54□□□□□ -1.68
PRPF4B-202ENST00000461612 ANKRD33Q7Z3H0 272 aa4.54□□□□□ -1.68
PRPF4B-202ENST00000461612 PCGF5Q86SE9 256 aa4.54□□□□□ -1.68
PRPF4B-202ENST00000461612 ADGRA1Q86SQ6 560 aa4.54□□□□□ -1.68
PRPF4B-202ENST00000461612 ZNF444Q8N0Y2 327 aaPredicted RBP4.54□□□□□ -1.68
PRPF4B-202ENST00000461612 PCYOX1LQ8NBM8 494 aa4.54□□□□□ -1.68
PRPF4B-202ENST00000461612 RFFLQ8WZ73 363 aa4.54□□□□□ -1.68
PRPF4B-202ENST00000461612 SAAL1Q96ER3 474 aa4.54□□□□□ -1.68
PRPF4B-202ENST00000461612 RRP36Q96EU6 259 aaKnown RBP4.54□□□□□ -1.68
PRPF4B-202ENST00000461612 APOLD1Q96LR9 279 aa4.54□□□□□ -1.68
PRPF4B-202ENST00000461612 GUCD1Q96NT3 240 aa4.54□□□□□ -1.68
PRPF4B-202ENST00000461612 RIOK1Q9BRS2 568 aaKnown RBP4.54□□□□□ -1.68
PRPF4B-202ENST00000461612 MSTO1Q9BUK6 570 aa4.54□□□□□ -1.68
PRPF4B-202ENST00000461612 TEX13BQ9BXU2 312 aa4.54□□□□□ -1.68
PRPF4B-202ENST00000461612 EBF3Q9H4W6 596 aa4.54□□□□□ -1.68
PRPF4B-202ENST00000461612 SNTG1Q9NSN8 517 aa4.54□□□□□ -1.68
PRPF4B-202ENST00000461612 DBNLQ9UJU6 430 aaKnown RBP4.54□□□□□ -1.68
PRPF4B-202ENST00000461612 PCDHA7Q9UN72 937 aa4.54□□□□□ -1.68
PRPF4B-202ENST00000461612 RBBP6Q7Z6E9 1792 aaKnown RBP4.54□□□□□ -1.68
PRPF4B-202ENST00000461612 ZNF532Q9HCE3 1301 aa4.53□□□□□ -1.68
PRPF4B-202ENST00000461612 A0A1W2PQM1 296 aa4.53□□□□□ -1.68
PRPF4B-202ENST00000461612 FAM90A8PA6NJQ4 464 aa4.53□□□□□ -1.68
PRPF4B-202ENST00000461612 ASB14A6NK59 587 aa4.53□□□□□ -1.68
PRPF4B-202ENST00000461612 TTC36A6NLP5 189 aa4.53□□□□□ -1.68
PRPF4B-202ENST00000461612 B4DLN1 442 aa4.53□□□□□ -1.68
PRPF4B-202ENST00000461612 INAFM1C9JVW0 142 aa4.53□□□□□ -1.68
PRPF4B-202ENST00000461612 ATP2A1O14983 1001 aa4.53□□□□□ -1.68
PRPF4B-202ENST00000461612 DUSP11O75319 330 aaKnown RBP4.53□□□□□ -1.68
PRPF4B-202ENST00000461612 TACC1O75410 805 aa4.53□□□□□ -1.68
PRPF4B-202ENST00000461612 TIMP1P01033 207 aa4.53□□□□□ -1.68
PRPF4B-202ENST00000461612 FAM90A13PP0C7W8 464 aa4.53□□□□□ -1.68
PRPF4B-202ENST00000461612 FAM90A24PP0C7X0 464 aa4.53□□□□□ -1.68
PRPF4B-202ENST00000461612 SNHG28P0DPA3 235 aa4.53□□□□□ -1.68
PRPF4B-202ENST00000461612 ABCD1P33897 745 aa4.53□□□□□ -1.68
PRPF4B-202ENST00000461612 KRT9P35527 623 aa4.53□□□□□ -1.68
PRPF4B-202ENST00000461612 MRPL12P52815 198 aaKnown RBP4.53□□□□□ -1.68
PRPF4B-202ENST00000461612 NUDT6P53370 316 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms