RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 MMS19Q96T76 1030 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 MLST8Q9BVC4 326 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 MAGEB5Q9BZ81 275 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 BRD8Q9H0E9 1235 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 RSPH9Q9H1X1 276 aaPredicted RBP4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 EPC1Q9H2F5 836 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 TMEM30AQ9NV96 361 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 FAM30AQ9NZY2 134 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 FBXL5Q9UKA1 691 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 TMCO1Q9UM00 188 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 CDY1Q9Y6F8 540 aa4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 SF3B1O75533 1304 aaKnown RBP eCLIP4.93□□□□□ -1.62
ATPAF1-203ENST00000460928 NOTCH4Q99466 2003 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 GOLGA6L7A0A1B0GV03 622 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 TARSL2A2RTX5 802 aaKnown RBP4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 CCDC162PA2VCL2 907 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 GRID2IPA4D2P6 1211 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 TMEM221A6NGB7 291 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 TMEM189-UBE2V1I3L0A0 370 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 M0QZQ0 153 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 SYT5O00445 386 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 SHOX2O60902 331 aaPredicted RBP4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 ATP6V1G1O75348 118 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 HAUS5O94927 633 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 ASS1P00966 412 aaKnown RBP4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 AFPP02771 609 aaKnown RBP4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 URODP06132 367 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 CCDC192P0DO97 292 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 CCDC130P13994 396 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 ZNF18P17022 549 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 BTF3P20290 206 aaKnown RBP4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 KCNA5P22460 613 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 KLRC2P26717 231 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 IL1R2P27930 398 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 RANBP1P43487 201 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 FNTAP49354 379 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 CCT8P50990 548 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 ZNF135P52742 658 aaPredicted RBP4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 NOP14P78316 857 aaKnown RBP4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 ROR1Q01973 937 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 MYL5Q02045 173 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 MPP3Q13368 585 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 KYAT1Q16773 422 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 DUSP6Q16828 381 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 USP41Q3LFD5 358 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 CTXN3Q4LDR2 81 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 SLC39A12Q504Y0 691 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 TCP11X2Q5H9J9 407 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 MDH1BQ5I0G3 518 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 ACOT1Q86TX2 421 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 PRIMA1Q86XR5 153 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 YAF2Q8IY57 180 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 ADGRF2Q8IZF7 708 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 TEX9Q8N6V9 391 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 C12orf29Q8N999 325 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 ATAD1Q8NBU5 361 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 OR52N2Q8NGI0 321 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 SCAMP4Q969E2 229 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 SLC35B4Q969S0 331 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 SPSB4Q96A44 273 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 SPDL1Q96EA4 605 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 NAF1Q96HR8 494 aaKnown RBP4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 MPP4Q96JB8 637 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 UROC1Q96N76 676 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 ZSWIM1Q9BR11 485 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 TUBGCP2Q9BSJ2 902 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 LSM14BQ9BX40 385 aaKnown RBP4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 FUT8Q9BYC5 575 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 ELOVL4Q9GZR5 314 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 MS4A7Q9GZW8 240 aaPredicted RBP4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 INTS2Q9H0H0 1204 aaKnown RBP4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 VIPAS39Q9H9C1 493 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 ACTR5Q9H9F9 607 aaPredicted RBP4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 TMEM8AQ9HCN3 771 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 SIX2Q9NPC8 291 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 MRPL17Q9NRX2 175 aaKnown RBP4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 FAM49BQ9NUQ9 324 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 FBXO34Q9NWN3 711 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 HCFC1R1Q9NWW0 138 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 DDX43Q9NXZ2 648 aaKnown RBP4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 IGSF9Q9P2J2 1179 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 XPR1Q9UBH6 696 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 MTRRQ9UBK8 725 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 MID2Q9UJV3 735 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 GTF3C4Q9UKN8 822 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 ITGA11Q9UKX5 1188 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 PAIP2BQ9ULR5 123 aaKnown RBP4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 RABL2BQ9UNT1 228 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 ZNF148Q9UQR1 794 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 ZNF510Q9Y2H8 683 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 DERAQ9Y315 318 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 TTLL3Q9Y4R7 772 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 DMDP11532 3685 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 MYH10P35580 1976 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 C2orf16Q68DN1 1984 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 COL4A3Q01955 1670 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 MYO10Q9HD67 2058 aa4.92□□□□□ -1.62
ATPAF1-203ENST00000460928 AQP12BA6NM10 295 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 B5MCH6 92 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 171.1 ms