RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 SAMD15Q9P1V8 674 aa22.27■■□□□ 1.16
C9orf3-209ENST00000460573 SOX13Q9UN79 622 aa22.27■■□□□ 1.16
C9orf3-209ENST00000460573 SNX24Q9Y343 169 aa22.27■■□□□ 1.16
C9orf3-209ENST00000460573 PCNX2A6NKB5 2137 aa22.26■■□□□ 1.15
C9orf3-209ENST00000460573 AGAP14A8MT82 685 aa22.26■■□□□ 1.15
C9orf3-209ENST00000460573 GPR89AB7ZAQ6 455 aa22.26■■□□□ 1.15
C9orf3-209ENST00000460573 SH3BP5O60239 455 aa22.26■■□□□ 1.15
C9orf3-209ENST00000460573 AVILO75366 819 aa22.26■■□□□ 1.15
C9orf3-209ENST00000460573 TNFP01375 233 aa22.26■■□□□ 1.15
C9orf3-209ENST00000460573 CEACAM5P06731 702 aa22.26■■□□□ 1.15
C9orf3-209ENST00000460573 IVLP07476 585 aa22.26■■□□□ 1.15
C9orf3-209ENST00000460573 GPR89BP0CG08 455 aa22.26■■□□□ 1.15
C9orf3-209ENST00000460573 JUNDP17535 347 aa22.26■■□□□ 1.15
C9orf3-209ENST00000460573 SPINK2P20155 84 aa22.26■■□□□ 1.15
C9orf3-209ENST00000460573 ITGALP20701 1170 aa22.26■■□□□ 1.15
C9orf3-209ENST00000460573 EPHA8P29322 1005 aaPredicted RBP22.26■■□□□ 1.15
C9orf3-209ENST00000460573 HK3P52790 923 aa22.26■■□□□ 1.15
C9orf3-209ENST00000460573 DRG2P55039 364 aaKnown RBP22.26■■□□□ 1.15
C9orf3-209ENST00000460573 NFATC2Q13469 925 aa22.26■■□□□ 1.15
C9orf3-209ENST00000460573 PEX6Q13608 980 aa22.26■■□□□ 1.15
C9orf3-209ENST00000460573 ALG11Q2TAA5 492 aa22.26■■□□□ 1.15
C9orf3-209ENST00000460573 GPR33Q49SQ1 333 aa22.26■■□□□ 1.15
C9orf3-209ENST00000460573 DNAJC21Q5F1R6 531 aaKnown RBP22.26■■□□□ 1.15
C9orf3-209ENST00000460573 LDLRAP1Q5SW96 308 aa22.26■■□□□ 1.15
C9orf3-209ENST00000460573 SNX20Q7Z614 316 aa22.26■■□□□ 1.15
C9orf3-209ENST00000460573 PIP4P1Q86T03 277 aa22.26■■□□□ 1.15
C9orf3-209ENST00000460573 PHACTR4Q8IZ21 702 aa22.26■■□□□ 1.15
C9orf3-209ENST00000460573 PDIK1LQ8N165 341 aa22.26■■□□□ 1.15
C9orf3-209ENST00000460573 ULK4Q96C45 1275 aa22.26■■□□□ 1.15
C9orf3-209ENST00000460573 ASB8Q9H765 288 aa22.26■■□□□ 1.15
C9orf3-209ENST00000460573 RMI1Q9H9A7 625 aa22.26■■□□□ 1.15
C9orf3-209ENST00000460573 TRIM39Q9HCM9 518 aa22.26■■□□□ 1.15
C9orf3-209ENST00000460573 PRSS38A1L453 326 aa22.25■■□□□ 1.15
C9orf3-209ENST00000460573 ASMTLO95671 621 aa22.25■■□□□ 1.15
C9orf3-209ENST00000460573 MC4RP32245 332 aa22.25■■□□□ 1.15
C9orf3-209ENST00000460573 CRADDP78560 199 aa22.25■■□□□ 1.15
C9orf3-209ENST00000460573 MRPS25P82663 173 aaKnown RBP22.25■■□□□ 1.15
C9orf3-209ENST00000460573 CAV1Q03135 178 aa22.25■■□□□ 1.15
C9orf3-209ENST00000460573 SHBQ15464 509 aa22.25■■□□□ 1.15
C9orf3-209ENST00000460573 DBX2Q6ZNG2 339 aa22.25■■□□□ 1.15
C9orf3-209ENST00000460573 HID1Q8IV36 788 aa22.25■■□□□ 1.15
C9orf3-209ENST00000460573 OR13J1Q8NGT2 312 aa22.25■■□□□ 1.15
C9orf3-209ENST00000460573 SCARF2Q96GP6 870 aaPredicted RBP22.25■■□□□ 1.15
C9orf3-209ENST00000460573 SGSM3Q96HU1 749 aa22.25■■□□□ 1.15
C9orf3-209ENST00000460573 LRRC1Q9BTT6 524 aa22.25■■□□□ 1.15
C9orf3-209ENST00000460573 SCNM1Q9BWG6 230 aa22.25■■□□□ 1.15
C9orf3-209ENST00000460573 FGF22Q9HCT0 170 aa22.25■■□□□ 1.15
C9orf3-209ENST00000460573 SPASTQ9UBP0 616 aa22.25■■□□□ 1.15
C9orf3-209ENST00000460573 APOBEC3BQ9UH17 382 aaKnown RBP22.25■■□□□ 1.15
C9orf3-209ENST00000460573 TP53BP1Q12888 1972 aaPredicted RBP22.25■■□□□ 1.15
C9orf3-209ENST00000460573 ZNF106Q9H2Y7 1883 aaKnown RBP22.24■■□□□ 1.15
C9orf3-209ENST00000460573 FAM237BA0A1B0GVD1 139 aa22.24■■□□□ 1.15
C9orf3-209ENST00000460573 VEGFDO43915 354 aa22.24■■□□□ 1.15
C9orf3-209ENST00000460573 UGT1A9O60656 530 aa22.24■■□□□ 1.15
C9orf3-209ENST00000460573 PIAS2O75928 621 aa22.24■■□□□ 1.15
C9orf3-209ENST00000460573 TRIM16O95361 564 aa22.24■■□□□ 1.15
C9orf3-209ENST00000460573 CD59P13987 128 aa22.24■■□□□ 1.15
C9orf3-209ENST00000460573 UGT1A6P19224 532 aa22.24■■□□□ 1.15
C9orf3-209ENST00000460573 UGT1A1P22309 533 aa22.24■■□□□ 1.15
C9orf3-209ENST00000460573 UGT1A4P22310 534 aa22.24■■□□□ 1.15
C9orf3-209ENST00000460573 UGT1A3P35503 534 aa22.24■■□□□ 1.15
C9orf3-209ENST00000460573 UGT1A5P35504 534 aa22.24■■□□□ 1.15
C9orf3-209ENST00000460573 CACNG1Q06432 222 aa22.24■■□□□ 1.15
C9orf3-209ENST00000460573 TRIP6Q15654 476 aaKnown RBP22.24■■□□□ 1.15
C9orf3-209ENST00000460573 ZNF542PQ5EBM4 170 aa22.24■■□□□ 1.15
C9orf3-209ENST00000460573 CASC4Q6P4E1 433 aa22.24■■□□□ 1.15
C9orf3-209ENST00000460573 SDR16C5Q8N3Y7 309 aa22.24■■□□□ 1.15
C9orf3-209ENST00000460573 FSTL5Q8N475 847 aaPredicted RBP22.24■■□□□ 1.15
C9orf3-209ENST00000460573 DDHD1Q8NEL9 900 aa22.24■■□□□ 1.15
C9orf3-209ENST00000460573 GDAP1Q8TB36 358 aa22.24■■□□□ 1.15
C9orf3-209ENST00000460573 SAP25Q8TEE9 199 aa22.24■■□□□ 1.15
C9orf3-209ENST00000460573 OR1E3Q8WZA6 343 aa22.24■■□□□ 1.15
C9orf3-209ENST00000460573 TSACCQ96A04 125 aaPredicted RBP22.24■■□□□ 1.15
C9orf3-209ENST00000460573 SIGLEC10Q96LC7 697 aa22.24■■□□□ 1.15
C9orf3-209ENST00000460573 ZNF778Q96MU6 729 aa22.24■■□□□ 1.15
C9orf3-209ENST00000460573 CARD6Q9BX69 1037 aa22.24■■□□□ 1.15
C9orf3-209ENST00000460573 ZCCHC2Q9C0B9 1178 aaKnown RBP22.24■■□□□ 1.15
C9orf3-209ENST00000460573 DPH5Q9H2P9 285 aa22.24■■□□□ 1.15
C9orf3-209ENST00000460573 L2HGDHQ9H9P8 463 aa22.24■■□□□ 1.15
C9orf3-209ENST00000460573 UGT1A7Q9HAW7 530 aa22.24■■□□□ 1.15
C9orf3-209ENST00000460573 UGT1A10Q9HAW8 530 aa22.24■■□□□ 1.15
C9orf3-209ENST00000460573 UGT1A8Q9HAW9 530 aa22.24■■□□□ 1.15
C9orf3-209ENST00000460573 CYP4F12Q9HCS2 524 aa22.24■■□□□ 1.15
C9orf3-209ENST00000460573 TREX1Q9NSU2 369 aa22.24■■□□□ 1.15
C9orf3-209ENST00000460573 KLF15Q9UIH9 416 aa22.24■■□□□ 1.15
C9orf3-209ENST00000460573 CRLS1Q9UJA2 301 aa22.24■■□□□ 1.15
C9orf3-209ENST00000460573 TMPRSS11EQ9UL52 423 aa22.24■■□□□ 1.15
C9orf3-209ENST00000460573 CSNK1G3Q9Y6M4 447 aa22.24■■□□□ 1.15
C9orf3-209ENST00000460573 TMEM131Q92545 1883 aa22.24■■□□□ 1.15
C9orf3-209ENST00000460573 MYLKQ15746 1914 aa22.23■■□□□ 1.15
C9orf3-209ENST00000460573 NEMP2A6NFY4 417 aa22.23■■□□□ 1.15
C9orf3-209ENST00000460573 CTSEP14091 401 aa22.23■■□□□ 1.15
C9orf3-209ENST00000460573 ARSDP51689 593 aa22.23■■□□□ 1.15
C9orf3-209ENST00000460573 ARL4CP56559 192 aa22.23■■□□□ 1.15
C9orf3-209ENST00000460573 PRAMEP78395 509 aa22.23■■□□□ 1.15
C9orf3-209ENST00000460573 BNIP3Q12983 259 aa22.23■■□□□ 1.15
C9orf3-209ENST00000460573 INAVAQ3KP66 663 aa22.23■■□□□ 1.15
C9orf3-209ENST00000460573 ZRANB3Q5FWF4 1079 aa22.23■■□□□ 1.15
C9orf3-209ENST00000460573 AFTPHQ6ULP2 937 aa22.23■■□□□ 1.15
C9orf3-209ENST00000460573 UNQ6494/PRO21346Q6UXR6 183 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms